RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 TBC1D9BQ66K14 1250 aa21.42■■□□□ 1.02
IRF1-211ENST00000613424 CLEC4GQ6UXB4 293 aa21.42■■□□□ 1.02
IRF1-211ENST00000613424 COPS6Q7L5N1 327 aa21.42■■□□□ 1.02
IRF1-211ENST00000613424 TRMT2AQ8IZ69 625 aaKnown RBP21.42■■□□□ 1.02
IRF1-211ENST00000613424 HYPKQ9NX55 129 aa21.42■■□□□ 1.02
IRF1-211ENST00000613424 PARP3Q9Y6F1 533 aa21.42■■□□□ 1.02
IRF1-211ENST00000613424 MAP3K15Q6ZN16 1313 aa21.41■■□□□ 1.02
IRF1-211ENST00000613424 ERVV-1B6SEH8 477 aa21.41■■□□□ 1.02
IRF1-211ENST00000613424 DDR1Q08345 913 aa21.41■■□□□ 1.02
IRF1-211ENST00000613424 KIF6Q6ZMV9 814 aa21.41■■□□□ 1.02
IRF1-211ENST00000613424 BICDL1Q6ZP65 573 aa21.41■■□□□ 1.02
IRF1-211ENST00000613424 XAGE3Q8WTP9 111 aa21.41■■□□□ 1.02
IRF1-211ENST00000613424 TCERG1O14776 1098 aaKnown RBP21.4■■□□□ 1.02
IRF1-211ENST00000613424 FHDC1Q9C0D6 1143 aaPredicted RBP21.4■■□□□ 1.02
IRF1-211ENST00000613424 ZNF652Q9Y2D9 606 aa21.4■■□□□ 1.02
IRF1-211ENST00000613424 SCN7AQ01118 1682 aa21.4■■□□□ 1.02
IRF1-211ENST00000613424 POLRMTO00411 1230 aaKnown RBP21.39■■□□□ 1.01
IRF1-211ENST00000613424 RGL2O15211 777 aa21.39■■□□□ 1.01
IRF1-211ENST00000613424 ZBTB3Q9H5J0 574 aa21.39■■□□□ 1.01
IRF1-211ENST00000613424 BCORQ6W2J9 1755 aa21.38■■□□□ 1.01
IRF1-211ENST00000613424 SYT17Q9BSW7 474 aa21.38■■□□□ 1.01
IRF1-211ENST00000613424 PHAXQ9H814 394 aaKnown RBP21.38■■□□□ 1.01
IRF1-211ENST00000613424 KLHL34Q8N239 644 aa21.37■■□□□ 1.01
IRF1-211ENST00000613424 SETDB2Q96T68 719 aa21.37■■□□□ 1.01
IRF1-211ENST00000613424 STK31Q9BXU1 1019 aa21.37■■□□□ 1.01
IRF1-211ENST00000613424 SLC4A2P04920 1241 aa21.36■■□□□ 1.01
IRF1-211ENST00000613424 SERPINB2P05120 415 aa21.36■■□□□ 1.01
IRF1-211ENST00000613424 GIGYF2Q6Y7W6 1299 aaKnown RBP21.36■■□□□ 1.01
IRF1-211ENST00000613424 ANKRD13DQ6ZTN6 518 aa21.35■■□□□ 1.01
IRF1-211ENST00000613424 CD2APQ9Y5K6 639 aa21.35■■□□□ 1.01
IRF1-211ENST00000613424 ZBED9Q6R2W3 1325 aa21.34■■□□□ 1.01
IRF1-211ENST00000613424 PLBD2Q8NHP8 589 aa21.34■■□□□ 1.01
IRF1-211ENST00000613424 NIP7Q9Y221 180 aaKnown RBP eCLIP21.34■■□□□ 1.01
IRF1-211ENST00000613424 NUP98P52948 1817 aa21.34■■□□□ 1.01
IRF1-211ENST00000613424 G2E3Q7L622 706 aa21.32■■□□□ 1
IRF1-211ENST00000613424 ZNF34Q8IZ26 560 aa21.32■■□□□ 1
IRF1-211ENST00000613424 CARMIL3Q8ND23 1372 aa21.32■■□□□ 1
IRF1-211ENST00000613424 NLGN2Q8NFZ4 835 aa21.31■■□□□ 1
IRF1-211ENST00000613424 AFDNP55196 1824 aaKnown RBP21.31■■□□□ 1
IRF1-211ENST00000613424 ATP10DQ9P241 1426 aa21.3■■□□□ 1
IRF1-211ENST00000613424 GPTP24298 496 aa21.3■■□□□ 1
IRF1-211ENST00000613424 TCIRG1Q13488 830 aa21.3■■□□□ 1
IRF1-211ENST00000613424 RIC3Q7Z5B4 369 aa21.3■■□□□ 1
IRF1-211ENST00000613424 FAM177BA6PVY3 158 aa21.29■■□□□ 1
IRF1-211ENST00000613424 DDX58O95786 925 aaKnown RBP21.29■■□□□ 1
IRF1-211ENST00000613424 HSP90AB3PQ58FF7 597 aa21.29■■□□□ 1
IRF1-211ENST00000613424 NBPF5PQ86XG9 351 aaPredicted RBP21.29■■□□□ 1
IRF1-211ENST00000613424 NRXN2Q9P2S2 1712 aa21.29■■□□□ 1
IRF1-211ENST00000613424 C10orf71Q711Q0 1435 aa21.29■■□□□ 1
IRF1-211ENST00000613424 UBN2Q6ZU65 1347 aa21.29■■□□□ 1
IRF1-211ENST00000613424 PRR5LQ6MZQ0 368 aa21.28■■□□□ 1
IRF1-211ENST00000613424 CCDC24Q8N4L8 307 aa21.28■■□□□ 1
IRF1-211ENST00000613424 CACNA1FO60840 1977 aa21.27■■□□□ 1
IRF1-211ENST00000613424 CT47B1P0C2W7 299 aaPredicted RBP21.27■■□□□ 1
IRF1-211ENST00000613424 TGFB2P61812 414 aa21.27■■□□□ 1
IRF1-211ENST00000613424 FLIIQ13045 1269 aa21.27■■□□□ 1
IRF1-211ENST00000613424 SUSD4Q5VX71 490 aa21.27■■□□□ 1
IRF1-211ENST00000613424 KSR2Q6VAB6 950 aa21.27■■□□□ 1
IRF1-211ENST00000613424 TPTE2Q6XPS3 522 aa21.27■■□□□ 1
IRF1-211ENST00000613424 CNBD1Q8NA66 436 aa21.27■■□□□ 1
IRF1-211ENST00000613424 PI4KAP2A4QPH2 592 aa21.26■□□□□ 0.99
IRF1-211ENST00000613424 NPHP1O15259 732 aa21.26■□□□□ 0.99
IRF1-211ENST00000613424 PARP10Q53GL7 1025 aa21.26■□□□□ 0.99
IRF1-211ENST00000613424 PI4KAP1Q8N8J0 262 aa21.26■□□□□ 0.99
IRF1-211ENST00000613424 ZNF428Q96B54 188 aa21.26■□□□□ 0.99
IRF1-211ENST00000613424 KIF13BQ9NQT8 1826 aa21.26■□□□□ 0.99
IRF1-211ENST00000613424 ATP5J2-PTCD1G3V325 749 aa21.25■□□□□ 0.99
IRF1-211ENST00000613424 NLRP10Q86W26 655 aa21.25■□□□□ 0.99
IRF1-211ENST00000613424 MRPL50Q8N5N7 158 aaKnown RBP21.25■□□□□ 0.99
IRF1-211ENST00000613424 SSH1Q8WYL5 1049 aa21.25■□□□□ 0.99
IRF1-211ENST00000613424 ISCA1Q9BUE6 129 aa21.25■□□□□ 0.99
IRF1-211ENST00000613424 MAP3K2Q9Y2U5 619 aa21.25■□□□□ 0.99
IRF1-211ENST00000613424 A0A0G2JLW4 131 aa21.24■□□□□ 0.99
IRF1-211ENST00000613424 ST5P78524 1137 aa21.24■□□□□ 0.99
IRF1-211ENST00000613424 FKBP5Q13451 457 aaPredicted RBP21.24■□□□□ 0.99
IRF1-211ENST00000613424 PPP1R42Q7Z4L9 355 aa21.24■□□□□ 0.99
IRF1-211ENST00000613424 METTL22Q9BUU2 404 aaPredicted RBP21.24■□□□□ 0.99
IRF1-211ENST00000613424 NYXQ9GZU5 481 aa21.24■□□□□ 0.99
IRF1-211ENST00000613424 DPEP1P16444 411 aa21.23■□□□□ 0.99
IRF1-211ENST00000613424 GTF2E1P29083 439 aaPredicted RBP21.23■□□□□ 0.99
IRF1-211ENST00000613424 TRIM28Q13263 835 aaKnown RBP21.23■□□□□ 0.99
IRF1-211ENST00000613424 ALDH1L2Q3SY69 923 aa21.23■□□□□ 0.99
IRF1-211ENST00000613424 MYD88Q99836 296 aa21.23■□□□□ 0.99
IRF1-211ENST00000613424 BRIP1Q9BX63 1249 aa21.23■□□□□ 0.99
IRF1-211ENST00000613424 ARFGEF2Q9Y6D5 1785 aa21.23■□□□□ 0.99
IRF1-211ENST00000613424 ADCY9O60503 1353 aa21.23■□□□□ 0.99
IRF1-211ENST00000613424 NTSR2O95665 410 aa21.22■□□□□ 0.99
IRF1-211ENST00000613424 NUTM1Q86Y26 1132 aa21.22■□□□□ 0.99
IRF1-211ENST00000613424 UTP14AQ9BVJ6 771 aaKnown RBP21.22■□□□□ 0.99
IRF1-211ENST00000613424 ANKRD36CQ5JPF3 1778 aa21.22■□□□□ 0.99
IRF1-211ENST00000613424 PXDNLA1KZ92 1463 aa21.21■□□□□ 0.99
IRF1-211ENST00000613424 KCNA3P22001 575 aa21.21■□□□□ 0.99
IRF1-211ENST00000613424 ERFEQ4G0M1 354 aa21.21■□□□□ 0.99
IRF1-211ENST00000613424 BCL2L13Q9BXK5 485 aa21.21■□□□□ 0.99
IRF1-211ENST00000613424 IBTKQ9P2D0 1353 aaPredicted RBP21.21■□□□□ 0.99
IRF1-211ENST00000613424 CHRNA5P30532 468 aa21.2■□□□□ 0.98
IRF1-211ENST00000613424 PDE6BP35913 854 aa21.2■□□□□ 0.98
IRF1-211ENST00000613424 N4BP2Q86UW6 1770 aaPredicted RBP21.2■□□□□ 0.98
IRF1-211ENST00000613424 KIAA1551Q9HCM1 1747 aa21.19■□□□□ 0.98
IRF1-211ENST00000613424 RARSP54136 660 aaKnown RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms