RNA–Protein interactions for RNA: ENST00000613146.4

ACACA-228, Transcript of acetyl-CoA carboxylase alpha, humanhuman

TSL 1 (best)

Gene ACACA, Length 3,974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACA-228ENST00000613146 KCNQ2O43526 872 aa9.35□□□□□ -0.91
ACACA-228ENST00000613146 SLFNL1Q499Z3 407 aa9.35□□□□□ -0.91
ACACA-228ENST00000613146 HSCBQ8IWL3 235 aa9.35□□□□□ -0.91
ACACA-228ENST00000613146 FAM89AQ96GI7 184 aa9.35□□□□□ -0.91
ACACA-228ENST00000613146 UPF3BQ9BZI7 483 aaKnown RBP9.35□□□□□ -0.91
ACACA-228ENST00000613146 G3BP1Q13283 466 aaKnown RBP eCLIP9.34□□□□□ -0.911e-6■■■□□ 14.6
ACACA-228ENST00000613146 KAZALD1Q96I82 304 aa9.34□□□□□ -0.91
ACACA-228ENST00000613146 IFIT2P09913 472 aaKnown RBP9.34□□□□□ -0.91
ACACA-228ENST00000613146 LMBR1LQ6UX01 489 aa9.34□□□□□ -0.91
ACACA-228ENST00000613146 CCDC24Q8N4L8 307 aa9.34□□□□□ -0.91
ACACA-228ENST00000613146 CHAMP1Q96JM3 812 aa9.34□□□□□ -0.91
ACACA-228ENST00000613146 STRCQ7RTU9 1775 aa9.34□□□□□ -0.91
ACACA-228ENST00000613146 NEURL1BA8MQ27 555 aa9.34□□□□□ -0.91
ACACA-228ENST00000613146 PTF1AQ7RTS3 328 aa9.34□□□□□ -0.91
ACACA-228ENST00000613146 CPA1P15085 419 aa9.33□□□□□ -0.92
ACACA-228ENST00000613146 CARD10Q9BWT7 1032 aa9.33□□□□□ -0.92
ACACA-228ENST00000613146 PCDH11XQ9BZA7 1347 aa9.33□□□□□ -0.92
ACACA-228ENST00000613146 PCDH11YQ9BZA8 1340 aa9.33□□□□□ -0.92
ACACA-228ENST00000613146 GCKRQ14397 625 aa9.33□□□□□ -0.92
ACACA-228ENST00000613146 LINS1Q8NG48 757 aa9.33□□□□□ -0.92
ACACA-228ENST00000613146 BICDL1Q6ZP65 573 aa9.33□□□□□ -0.92
ACACA-228ENST00000613146 DNAJC2Q99543 621 aaKnown RBP9.33□□□□□ -0.92
ACACA-228ENST00000613146 TIMM10P62072 90 aa9.32□□□□□ -0.92
ACACA-228ENST00000613146 CLASRPQ8N2M8 674 aaKnown RBP9.32□□□□□ -0.92
ACACA-228ENST00000613146 SSH3Q8TE77 659 aa9.32□□□□□ -0.92
ACACA-228ENST00000613146 CASC1Q6TDU7 716 aa9.32□□□□□ -0.92
ACACA-228ENST00000613146 PALD1Q9ULE6 856 aa9.32□□□□□ -0.92
ACACA-228ENST00000613146 HLFQ16534 295 aa9.31□□□□□ -0.92
ACACA-228ENST00000613146 EAF2Q96CJ1 260 aaPredicted RBP9.31□□□□□ -0.92
ACACA-228ENST00000613146 METTL22Q9BUU2 404 aaPredicted RBP9.31□□□□□ -0.92
ACACA-228ENST00000613146 SNRKQ9NRH2 765 aa9.31□□□□□ -0.92
ACACA-228ENST00000613146 SLIT3O75094 1523 aa9.31□□□□□ -0.92
ACACA-228ENST00000613146 TRPM3Q9HCF6 1732 aaPredicted RBP9.31□□□□□ -0.92
ACACA-228ENST00000613146 SASH1O94885 1247 aa9.31□□□□□ -0.92
ACACA-228ENST00000613146 TFCP2Q12800 502 aa9.31□□□□□ -0.92
ACACA-228ENST00000613146 DDB1Q16531 1140 aa9.31□□□□□ -0.92
ACACA-228ENST00000613146 PUS3Q9BZE2 481 aaKnown RBP9.31□□□□□ -0.92
ACACA-228ENST00000613146 ATG3Q9NT62 314 aa9.31□□□□□ -0.92
ACACA-228ENST00000613146 BABAM1Q9NWV8 329 aa9.31□□□□□ -0.92
ACACA-228ENST00000613146 SNAP23O00161 211 aa9.31□□□□□ -0.92
ACACA-228ENST00000613146 NEK4P51957 841 aa9.31□□□□□ -0.92
ACACA-228ENST00000613146 KIF1BPQ96EK5 621 aa9.31□□□□□ -0.92
ACACA-228ENST00000613146 TCEANC2Q96MN5 208 aa9.31□□□□□ -0.92
ACACA-228ENST00000613146 ZBTB1Q9Y2K1 713 aa9.31□□□□□ -0.92
ACACA-228ENST00000613146 PPFIA3O75145 1194 aa9.3□□□□□ -0.92
ACACA-228ENST00000613146 HELBQ8NG08 1087 aaPredicted RBP9.3□□□□□ -0.92
ACACA-228ENST00000613146 KIF2CQ99661 725 aa9.3□□□□□ -0.92
ACACA-228ENST00000613146 KCNJ4P48050 445 aa9.3□□□□□ -0.92
ACACA-228ENST00000613146 SLC4A9Q96Q91 983 aa9.3□□□□□ -0.92
ACACA-228ENST00000613146 USP26Q9BXU7 913 aa9.3□□□□□ -0.92
ACACA-228ENST00000613146 COL5A2P05997 1499 aaPredicted RBP9.3□□□□□ -0.92
ACACA-228ENST00000613146 LRRC24Q50LG9 513 aa9.3□□□□□ -0.92
ACACA-228ENST00000613146 HSP90AB3PQ58FF7 597 aa9.3□□□□□ -0.92
ACACA-228ENST00000613146 IBTKQ9P2D0 1353 aaPredicted RBP9.29□□□□□ -0.92
ACACA-228ENST00000613146 HOXB7P09629 217 aa9.29□□□□□ -0.92
ACACA-228ENST00000613146 ERC2O15083 957 aa9.29□□□□□ -0.92
ACACA-228ENST00000613146 TAF7LQ5H9L4 462 aa9.29□□□□□ -0.92
ACACA-228ENST00000613146 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.29□□□□□ -0.929e-8■■■■□ 21.1
ACACA-228ENST00000613146 XIRP1Q702N8 1843 aaKnown RBP9.29□□□□□ -0.92
ACACA-228ENST00000613146 ATP6V1AP38606 617 aa9.29□□□□□ -0.92
ACACA-228ENST00000613146 FAM227BQ96M60 508 aa9.29□□□□□ -0.92
ACACA-228ENST00000613146 CHMLP26374 656 aa9.28□□□□□ -0.92
ACACA-228ENST00000613146 DDX46Q7L014 1031 aaKnown RBP9.28□□□□□ -0.92
ACACA-228ENST00000613146 HEG1Q9ULI3 1381 aa9.28□□□□□ -0.92
ACACA-228ENST00000613146 HCLS1P14317 486 aaPredicted RBP9.28□□□□□ -0.92
ACACA-228ENST00000613146 MEX3CQ5U5Q3 659 aaKnown RBP9.28□□□□□ -0.92
ACACA-228ENST00000613146 AEBP2Q6ZN18 517 aaPredicted RBP9.28□□□□□ -0.92
ACACA-228ENST00000613146 ZGPATQ8N5A5 531 aaKnown RBP9.28□□□□□ -0.92
ACACA-228ENST00000613146 DBNDD2Q9BQY9 259 aa9.28□□□□□ -0.92
ACACA-228ENST00000613146 TOM1O60784 492 aa9.28□□□□□ -0.92
ACACA-228ENST00000613146 ALDH1L1O75891 902 aa9.28□□□□□ -0.92
ACACA-228ENST00000613146 PKP1Q13835 747 aa9.28□□□□□ -0.92
ACACA-228ENST00000613146 CCDC129Q6ZRS4 1044 aa9.28□□□□□ -0.92
ACACA-228ENST00000613146 SEC62Q99442 399 aaKnown RBP9.28□□□□□ -0.92
ACACA-228ENST00000613146 DIAPH3Q9NSV4 1193 aa9.28□□□□□ -0.92
ACACA-228ENST00000613146 ALS2Q96Q42 1657 aa9.28□□□□□ -0.92
ACACA-228ENST00000613146 POLA2Q14181 598 aa9.27□□□□□ -0.92
ACACA-228ENST00000613146 FSD1Q9BTV5 496 aa9.27□□□□□ -0.92
ACACA-228ENST00000613146 DCCP43146 1447 aa9.27□□□□□ -0.93
ACACA-228ENST00000613146 ERVV-2B6SEH9 535 aa9.27□□□□□ -0.93
ACACA-228ENST00000613146 COL9A3Q14050 684 aaPredicted RBP9.27□□□□□ -0.93
ACACA-228ENST00000613146 MARCH10Q8NA82 808 aaPredicted RBP9.27□□□□□ -0.93
ACACA-228ENST00000613146 PLBD2Q8NHP8 589 aa9.27□□□□□ -0.93
ACACA-228ENST00000613146 ESYT1Q9BSJ8 1104 aa9.27□□□□□ -0.93
ACACA-228ENST00000613146 CWC25Q9NXE8 425 aaPredicted RBP9.27□□□□□ -0.93
ACACA-228ENST00000613146 CPDO75976 1380 aa9.26□□□□□ -0.93
ACACA-228ENST00000613146 FKBP4Q02790 459 aaKnown RBP eCLIP9.26□□□□□ -0.93
ACACA-228ENST00000613146 LRP10Q7Z4F1 713 aa9.26□□□□□ -0.93
ACACA-228ENST00000613146 PI4K2BQ8TCG2 481 aa9.26□□□□□ -0.93
ACACA-228ENST00000613146 TRMT112Q9UI30 125 aaKnown RBP9.26□□□□□ -0.93
ACACA-228ENST00000613146 AK9Q5TCS8 1911 aa9.26□□□□□ -0.93
ACACA-228ENST00000613146 STARD3NLO95772 234 aa9.26□□□□□ -0.93
ACACA-228ENST00000613146 NCLP19338 710 aaKnown RBP9.26□□□□□ -0.93
ACACA-228ENST00000613146 GORABQ5T7V8 394 aa9.26□□□□□ -0.93
ACACA-228ENST00000613146 KIF6Q6ZMV9 814 aa9.26□□□□□ -0.93
ACACA-228ENST00000613146 STK11IPQ8N1F8 1099 aa9.26□□□□□ -0.93
ACACA-228ENST00000613146 PTH1RQ03431 593 aa9.26□□□□□ -0.93
ACACA-228ENST00000613146 PTPN12Q05209 780 aaKnown RBP9.26□□□□□ -0.93
ACACA-228ENST00000613146 PI16Q6UXB8 463 aa9.26□□□□□ -0.93
ACACA-228ENST00000613146 KIAA1211Q6ZU35 1233 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms