RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 AIDAQ96BJ3 306 aa23.26■■□□□ 1.31
CSNK1E-215ENST00000612795 MASTLQ96GX5 879 aa23.25■■□□□ 1.31
CSNK1E-215ENST00000612795 SRGNP10124 158 aa23.24■■□□□ 1.31
CSNK1E-215ENST00000612795 FMNL2Q96PY5 1086 aa23.23■■□□□ 1.31
CSNK1E-215ENST00000612795 PRDM10Q9NQV6 1147 aa23.23■■□□□ 1.31
CSNK1E-215ENST00000612795 PASKQ96RG2 1323 aa23.23■■□□□ 1.31
CSNK1E-215ENST00000612795 GNAT3A8MTJ3 354 aa23.22■■□□□ 1.31
CSNK1E-215ENST00000612795 CAMTA2O94983 1202 aa23.22■■□□□ 1.31
CSNK1E-215ENST00000612795 GAS2L2Q8NHY3 880 aa23.22■■□□□ 1.31
CSNK1E-215ENST00000612795 A1BGP04217 495 aa23.21■■□□□ 1.31
CSNK1E-215ENST00000612795 CTCFP49711 727 aaPredicted RBP23.21■■□□□ 1.31
CSNK1E-215ENST00000612795 CCDC93Q567U6 631 aa23.21■■□□□ 1.31
CSNK1E-215ENST00000612795 EAPPQ56P03 285 aaPredicted RBP23.21■■□□□ 1.31
CSNK1E-215ENST00000612795 DZIP3Q86Y13 1208 aaKnown RBP23.21■■□□□ 1.31
CSNK1E-215ENST00000612795 L3MBTL3Q96JM7 780 aaPredicted RBP23.21■■□□□ 1.31
CSNK1E-215ENST00000612795 TAF1DQ9H5J8 278 aaPredicted RBP23.21■■□□□ 1.31
CSNK1E-215ENST00000612795 ADAMTSL1Q8N6G6 1762 aa23.21■■□□□ 1.31
CSNK1E-215ENST00000612795 TMEM88BA6NKF7 163 aa23.2■■□□□ 1.3
CSNK1E-215ENST00000612795 IL17REQ8NFR9 667 aa23.2■■□□□ 1.3
CSNK1E-215ENST00000612795 PCGF6Q9BYE7 350 aa23.2■■□□□ 1.3
CSNK1E-215ENST00000612795 COL3A1P02461 1466 aaPredicted RBP23.19■■□□□ 1.3
CSNK1E-215ENST00000612795 U2SURPO15042 1029 aaKnown RBP23.19■■□□□ 1.3
CSNK1E-215ENST00000612795 NBPF5PQ86XG9 351 aaPredicted RBP23.19■■□□□ 1.3
CSNK1E-215ENST00000612795 CLEC11AQ9Y240 323 aa23.19■■□□□ 1.3
CSNK1E-215ENST00000612795 VEGFBP49765 207 aa23.18■■□□□ 1.3
CSNK1E-215ENST00000612795 CC2D1BQ5T0F9 858 aaKnown RBP23.18■■□□□ 1.3
CSNK1E-215ENST00000612795 HACL1Q9UJ83 578 aa23.17■■□□□ 1.3
CSNK1E-215ENST00000612795 ZNF652Q9Y2D9 606 aa23.17■■□□□ 1.3
CSNK1E-215ENST00000612795 ZNF541Q9H0D2 1346 aa23.16■■□□□ 1.3
CSNK1E-215ENST00000612795 NPR1P16066 1061 aa23.16■■□□□ 1.3
CSNK1E-215ENST00000612795 FKBP4Q02790 459 aaKnown RBP eCLIP23.16■■□□□ 1.3
CSNK1E-215ENST00000612795 BTBD11A6QL63 1104 aa23.15■■□□□ 1.3
CSNK1E-215ENST00000612795 ZNF277Q9NRM2 450 aaPredicted RBP23.15■■□□□ 1.3
CSNK1E-215ENST00000612795 ITGBL1O95965 494 aaPredicted RBP23.14■■□□□ 1.29
CSNK1E-215ENST00000612795 EPHX2P34913 555 aa23.14■■□□□ 1.29
CSNK1E-215ENST00000612795 PIP4K2AP48426 406 aaPredicted RBP23.14■■□□□ 1.29
CSNK1E-215ENST00000612795 C7orf43Q8WVR3 580 aa23.14■■□□□ 1.29
CSNK1E-215ENST00000612795 CEMIPQ8WUJ3 1361 aa23.14■■□□□ 1.29
CSNK1E-215ENST00000612795 KIF7Q2M1P5 1343 aa23.13■■□□□ 1.29
CSNK1E-215ENST00000612795 LBX1P52954 281 aa23.13■■□□□ 1.29
CSNK1E-215ENST00000612795 CLEC4GQ6UXB4 293 aa23.13■■□□□ 1.29
CSNK1E-215ENST00000612795 RNF123Q5XPI4 1314 aa23.12■■□□□ 1.29
CSNK1E-215ENST00000612795 KCNQ3O43525 872 aa23.12■■□□□ 1.29
CSNK1E-215ENST00000612795 PNMA8AQ86V59 439 aaPredicted RBP23.12■■□□□ 1.29
CSNK1E-215ENST00000612795 WBP1LQ9NX94 342 aa23.12■■□□□ 1.29
CSNK1E-215ENST00000612795 RTKN2Q8IZC4 609 aa23.11■■□□□ 1.29
CSNK1E-215ENST00000612795 USP16Q9Y5T5 823 aa23.11■■□□□ 1.29
CSNK1E-215ENST00000612795 LAMB4A4D0S4 1761 aa23.11■■□□□ 1.29
CSNK1E-215ENST00000612795 RASSF10A6NK89 507 aa23.1■■□□□ 1.29
CSNK1E-215ENST00000612795 MAP1SQ66K74 1059 aaPredicted RBP23.1■■□□□ 1.29
CSNK1E-215ENST00000612795 TPTE2Q6XPS3 522 aa23.1■■□□□ 1.29
CSNK1E-215ENST00000612795 NIP7Q9Y221 180 aaKnown RBP eCLIP23.1■■□□□ 1.29
CSNK1E-215ENST00000612795 TRPM7Q96QT4 1865 aa23.1■■□□□ 1.29
CSNK1E-215ENST00000612795 IARSP41252 1262 aaKnown RBP23.09■■□□□ 1.29
CSNK1E-215ENST00000612795 CNGB1Q14028 1251 aaPredicted RBP23.09■■□□□ 1.29
CSNK1E-215ENST00000612795 DEFB115Q30KQ5 88 aa23.09■■□□□ 1.29
CSNK1E-215ENST00000612795 OLFM4Q6UX06 510 aa23.09■■□□□ 1.29
CSNK1E-215ENST00000612795 CNTROBQ8N137 903 aa23.09■■□□□ 1.29
CSNK1E-215ENST00000612795 ABT1Q9ULW3 272 aaKnown RBP23.09■■□□□ 1.29
CSNK1E-215ENST00000612795 THSD7BQ9C0I4 1608 aa23.08■■□□□ 1.29
CSNK1E-215ENST00000612795 FAM177BA6PVY3 158 aa23.08■■□□□ 1.29
CSNK1E-215ENST00000612795 PRAMEF22A3QJZ6 481 aa23.07■■□□□ 1.28
CSNK1E-215ENST00000612795 KLRG2A4D1S0 409 aaPredicted RBP23.07■■□□□ 1.28
CSNK1E-215ENST00000612795 PER1O15534 1290 aaPredicted RBP23.07■■□□□ 1.28
CSNK1E-215ENST00000612795 HSPA8P11142 646 aaKnown RBP23.07■■□□□ 1.28
CSNK1E-215ENST00000612795 NUP98P52948 1817 aa23.06■■□□□ 1.28
CSNK1E-215ENST00000612795 FZD9O00144 591 aa23.06■■□□□ 1.28
CSNK1E-215ENST00000612795 SNRPA1P09661 255 aaKnown RBP23.06■■□□□ 1.28
CSNK1E-215ENST00000612795 ALDH1B1P30837 517 aa23.06■■□□□ 1.28
CSNK1E-215ENST00000612795 MAP2K1Q02750 393 aaPredicted RBP23.06■■□□□ 1.28
CSNK1E-215ENST00000612795 GPC2Q8N158 579 aa23.06■■□□□ 1.28
CSNK1E-215ENST00000612795 SYNE4Q8N205 404 aa23.06■■□□□ 1.28
CSNK1E-215ENST00000612795 WDR33Q9C0J8 1336 aaKnown RBP23.06■■□□□ 1.28
CSNK1E-215ENST00000612795 GTF2E1P29083 439 aaPredicted RBP23.05■■□□□ 1.28
CSNK1E-215ENST00000612795 PRKAR2BP31323 418 aa23.05■■□□□ 1.28
CSNK1E-215ENST00000612795 JDP2Q8WYK2 163 aa23.05■■□□□ 1.28
CSNK1E-215ENST00000612795 ABHD8Q96I13 439 aa23.05■■□□□ 1.28
CSNK1E-215ENST00000612795 LTBP1Q14766 1721 aa23.05■■□□□ 1.28
CSNK1E-215ENST00000612795 RGL2O15211 777 aa23.03■■□□□ 1.28
CSNK1E-215ENST00000612795 LMOD1P29536 600 aaPredicted RBP23.03■■□□□ 1.28
CSNK1E-215ENST00000612795 PAXIP1Q6ZW49 1069 aaPredicted RBP23.03■■□□□ 1.28
CSNK1E-215ENST00000612795 RTF1Q92541 710 aaKnown RBP23.03■■□□□ 1.28
CSNK1E-215ENST00000612795 PHACTR3Q96KR7 559 aa23.03■■□□□ 1.28
CSNK1E-215ENST00000612795 GJA3Q9Y6H8 435 aa23.03■■□□□ 1.28
CSNK1E-215ENST00000612795 NPC1L1Q9UHC9 1359 aa23.02■■□□□ 1.28
CSNK1E-215ENST00000612795 EIF6P56537 245 aaKnown RBP23.02■■□□□ 1.28
CSNK1E-215ENST00000612795 FAM161AQ3B820 660 aa23.02■■□□□ 1.28
CSNK1E-215ENST00000612795 PSMD1Q99460 953 aa23.01■■□□□ 1.27
CSNK1E-215ENST00000612795 BEGAINQ9BUH8 593 aa23.01■■□□□ 1.27
CSNK1E-215ENST00000612795 RSPH6AQ9H0K4 717 aa23.01■■□□□ 1.27
CSNK1E-215ENST00000612795 DDX21Q9NR30 783 aaKnown RBP eCLIP23.01■■□□□ 1.27
CSNK1E-215ENST00000612795 SNED1Q8TER0 1413 aa23■■□□□ 1.27
CSNK1E-215ENST00000612795 COL4A5P29400 1685 aa23■■□□□ 1.27
CSNK1E-215ENST00000612795 NBPF26B4DH59 902 aa23■■□□□ 1.27
CSNK1E-215ENST00000612795 NBPF10Q6P3W6 841 aaKnown RBP23■■□□□ 1.27
CSNK1E-215ENST00000612795 NBPF15Q8N660 670 aa23■■□□□ 1.27
CSNK1E-215ENST00000612795 CFAP53Q96M91 514 aa23■■□□□ 1.27
CSNK1E-215ENST00000612795 GRM1Q13255 1194 aa22.99■■□□□ 1.27
CSNK1E-215ENST00000612795 MCM10Q7L590 875 aa22.99■■□□□ 1.27
CSNK1E-215ENST00000612795 ABCC12Q96J65 1359 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms