RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 AACSQ86V21 672 aa17.12■□□□□ 0.33
PCDHGA3-202ENST00000612467 LMBRD1Q9NUN5 540 aa17.12■□□□□ 0.33
PCDHGA3-202ENST00000612467 EIF5BO60841 1220 aaKnown RBP17.12■□□□□ 0.33
PCDHGA3-202ENST00000612467 MCCP23508 829 aa17.12■□□□□ 0.33
PCDHGA3-202ENST00000612467 MYD88Q99836 296 aa17.12■□□□□ 0.33
PCDHGA3-202ENST00000612467 DDX21Q9NR30 783 aaKnown RBP eCLIP17.12■□□□□ 0.33
PCDHGA3-202ENST00000612467 MST1RQ04912 1400 aa17.11■□□□□ 0.33
PCDHGA3-202ENST00000612467 SGSM2O43147 1006 aa17.11■□□□□ 0.33
PCDHGA3-202ENST00000612467 SASH1O94885 1247 aa17.11■□□□□ 0.33
PCDHGA3-202ENST00000612467 TATP17735 454 aaPredicted RBP17.11■□□□□ 0.33
PCDHGA3-202ENST00000612467 COL9A3Q14050 684 aaPredicted RBP17.11■□□□□ 0.33
PCDHGA3-202ENST00000612467 STRCP1A6NGW2 1772 aa17.11■□□□□ 0.33
PCDHGA3-202ENST00000612467 C5P01031 1676 aa17.11■□□□□ 0.33
PCDHGA3-202ENST00000612467 HYPKQ9NX55 129 aa17.11■□□□□ 0.33
PCDHGA3-202ENST00000612467 GOLGA6L22H0YM25 854 aa17.1■□□□□ 0.33
PCDHGA3-202ENST00000612467 MRE11P49959 708 aa17.1■□□□□ 0.33
PCDHGA3-202ENST00000612467 PTH1RQ03431 593 aa17.1■□□□□ 0.33
PCDHGA3-202ENST00000612467 CLASRPQ8N2M8 674 aaKnown RBP17.1■□□□□ 0.33
PCDHGA3-202ENST00000612467 EAF2Q96CJ1 260 aaPredicted RBP17.1■□□□□ 0.33
PCDHGA3-202ENST00000612467 LSG1Q9H089 658 aaKnown RBP17.1■□□□□ 0.33
PCDHGA3-202ENST00000612467 SIPA1L3O60292 1781 aaPredicted RBP17.1■□□□□ 0.33
PCDHGA3-202ENST00000612467 ATP5J2-PTCD1G3V325 749 aa17.1■□□□□ 0.33
PCDHGA3-202ENST00000612467 PTCD1O75127 700 aaKnown RBP17.1■□□□□ 0.33
PCDHGA3-202ENST00000612467 HSPA4P34932 840 aa17.1■□□□□ 0.33
PCDHGA3-202ENST00000612467 CNTROBQ8N137 903 aa17.1■□□□□ 0.33
PCDHGA3-202ENST00000612467 LINS1Q8NG48 757 aa17.1■□□□□ 0.33
PCDHGA3-202ENST00000612467 SNX14Q9Y5W7 946 aa17.1■□□□□ 0.33
PCDHGA3-202ENST00000612467 NDUFB9Q9Y6M9 179 aa17.1■□□□□ 0.33
PCDHGA3-202ENST00000612467 ALDH1L1O75891 902 aa17.09■□□□□ 0.33
PCDHGA3-202ENST00000612467 CLEC17AQ6ZS10 378 aa17.09■□□□□ 0.33
PCDHGA3-202ENST00000612467 GPT2Q8TD30 523 aa17.09■□□□□ 0.33
PCDHGA3-202ENST00000612467 AOX1Q06278 1338 aa17.09■□□□□ 0.33
PCDHGA3-202ENST00000612467 ALS2Q96Q42 1657 aa17.09■□□□□ 0.33
PCDHGA3-202ENST00000612467 IFIT2P09913 472 aaKnown RBP17.09■□□□□ 0.33
PCDHGA3-202ENST00000612467 EDC3Q96F86 508 aaKnown RBP17.09■□□□□ 0.33
PCDHGA3-202ENST00000612467 GDPD2Q9HCC8 539 aa17.09■□□□□ 0.33
PCDHGA3-202ENST00000612467 MTX1Q13505 466 aa17.08■□□□□ 0.33
PCDHGA3-202ENST00000612467 CWC22Q9HCG8 908 aaKnown RBP17.08■□□□□ 0.33
PCDHGA3-202ENST00000612467 CCDC9Q9Y3X0 531 aaKnown RBP17.08■□□□□ 0.33
PCDHGA3-202ENST00000612467 CHGBP05060 677 aa17.08■□□□□ 0.32
PCDHGA3-202ENST00000612467 SKOR2Q2VWA4 1001 aaPredicted RBP17.08■□□□□ 0.32
PCDHGA3-202ENST00000612467 RAD50Q92878 1312 aa17.08■□□□□ 0.32
PCDHGA3-202ENST00000612467 CAMTA1Q9Y6Y1 1673 aa17.07■□□□□ 0.32
PCDHGA3-202ENST00000612467 KLHL40Q2TBA0 621 aa17.07■□□□□ 0.32
PCDHGA3-202ENST00000612467 FAM227BQ96M60 508 aa17.07■□□□□ 0.32
PCDHGA3-202ENST00000612467 NEURL1BA8MQ27 555 aa17.07■□□□□ 0.32
PCDHGA3-202ENST00000612467 ADCK5Q3MIX3 580 aa17.07■□□□□ 0.32
PCDHGA3-202ENST00000612467 BOLA2Q9H3K6 86 aa17.07■□□□□ 0.32
PCDHGA3-202ENST00000612467 ECHDC1Q9NTX5 307 aa17.07■□□□□ 0.32
PCDHGA3-202ENST00000612467 IFNL2Q8IZJ0 200 aa17.06■□□□□ 0.32
PCDHGA3-202ENST00000612467 DIAPH3Q9NSV4 1193 aa17.06■□□□□ 0.32
PCDHGA3-202ENST00000612467 GLRX3O76003 335 aaKnown RBP17.06■□□□□ 0.32
PCDHGA3-202ENST00000612467 LARGE1O95461 756 aa17.06■□□□□ 0.32
PCDHGA3-202ENST00000612467 DDX58O95786 925 aaKnown RBP17.06■□□□□ 0.32
PCDHGA3-202ENST00000612467 ANAPC15P60006 121 aa17.05■□□□□ 0.32
PCDHGA3-202ENST00000612467 CUL4AQ13619 759 aa17.05■□□□□ 0.32
PCDHGA3-202ENST00000612467 HSP90AB4PQ58FF6 505 aa17.05■□□□□ 0.32
PCDHGA3-202ENST00000612467 FAM43AQ8N2R8 423 aa17.05■□□□□ 0.32
PCDHGA3-202ENST00000612467 AK2P54819 239 aa17.05■□□□□ 0.32
PCDHGA3-202ENST00000612467 PRPF40BQ6NWY9 871 aaKnown RBP17.05■□□□□ 0.32
PCDHGA3-202ENST00000612467 G3BP1Q13283 466 aaKnown RBP eCLIP17.05■□□□□ 0.32
PCDHGA3-202ENST00000612467 GCKRQ14397 625 aa17.05■□□□□ 0.32
PCDHGA3-202ENST00000612467 TTC5Q8N0Z6 440 aa17.05■□□□□ 0.32
PCDHGA3-202ENST00000612467 KIF1AQ12756 1690 aa17.04■□□□□ 0.32
PCDHGA3-202ENST00000612467 UBE3BQ7Z3V4 1068 aa17.04■□□□□ 0.32
PCDHGA3-202ENST00000612467 LRP10Q7Z4F1 713 aa17.04■□□□□ 0.32
PCDHGA3-202ENST00000612467 SCN11AQ9UI33 1791 aa17.04■□□□□ 0.32
PCDHGA3-202ENST00000612467 OVOS2A0A0G2JMS6 1433 aa17.04■□□□□ 0.32
PCDHGA3-202ENST00000612467 CASTP20810 708 aaKnown RBP17.04■□□□□ 0.32
PCDHGA3-202ENST00000612467 ZSCAN23Q3MJ62 389 aa17.04■□□□□ 0.32
PCDHGA3-202ENST00000612467 ANKRD13DQ6ZTN6 518 aa17.04■□□□□ 0.32
PCDHGA3-202ENST00000612467 KIAA1211Q6ZU35 1233 aa17.04■□□□□ 0.32
PCDHGA3-202ENST00000612467 TAF6LQ9Y6J9 622 aa17.04■□□□□ 0.32
PCDHGA3-202ENST00000612467 LARP1Q6PKG0 1096 aaKnown RBP17.03■□□□□ 0.32
PCDHGA3-202ENST00000612467 RUFY3Q7L099 469 aa17.03■□□□□ 0.32
PCDHGA3-202ENST00000612467 TCEANC2Q96MN5 208 aa17.03■□□□□ 0.32
PCDHGA3-202ENST00000612467 CHMP4AQ9BY43 222 aa17.03■□□□□ 0.32
PCDHGA3-202ENST00000612467 TTC41PQ6P2S7 1318 aa17.03■□□□□ 0.32
PCDHGA3-202ENST00000612467 BRD1O95696 1058 aa17.03■□□□□ 0.32
PCDHGA3-202ENST00000612467 CABP4P57796 275 aa17.03■□□□□ 0.32
PCDHGA3-202ENST00000612467 COL18A1P39060 1754 aa17.03■□□□□ 0.32
PCDHGA3-202ENST00000612467 ERBB4Q15303 1308 aa17.02■□□□□ 0.32
PCDHGA3-202ENST00000612467 USP42Q9H9J4 1324 aaKnown RBP17.02■□□□□ 0.32
PCDHGA3-202ENST00000612467 NEXNQ0ZGT2 675 aa17.02■□□□□ 0.32
PCDHGA3-202ENST00000612467 NMIQ13287 307 aaPredicted RBP17.02■□□□□ 0.32
PCDHGA3-202ENST00000612467 METTL22Q9BUU2 404 aaPredicted RBP17.02■□□□□ 0.32
PCDHGA3-202ENST00000612467 TMEM63CQ9P1W3 806 aa17.02■□□□□ 0.32
PCDHGA3-202ENST00000612467 ADAMTS7Q9UKP4 1686 aa17.01■□□□□ 0.31
PCDHGA3-202ENST00000612467 A0A0D9SFI3 127 aa17.01■□□□□ 0.31
PCDHGA3-202ENST00000612467 JAKMIP1Q96N16 626 aaKnown RBP17.01■□□□□ 0.31
PCDHGA3-202ENST00000612467 TTC14Q96N46 770 aa17.01■□□□□ 0.31
PCDHGA3-202ENST00000612467 UTYO14607 1347 aa17.01■□□□□ 0.31
PCDHGA3-202ENST00000612467 SNRPA1P09661 255 aaKnown RBP17.01■□□□□ 0.31
PCDHGA3-202ENST00000612467 SPATA31A3Q5VYP0 1347 aa17.01■□□□□ 0.31
PCDHGA3-202ENST00000612467 TNS3Q68CZ2 1445 aa17.01■□□□□ 0.31
PCDHGA3-202ENST00000612467 GADD45BO75293 160 aaPredicted RBP17■□□□□ 0.31
PCDHGA3-202ENST00000612467 PRIM1P49642 420 aaKnown RBP17■□□□□ 0.31
PCDHGA3-202ENST00000612467 MCM2P49736 904 aa17■□□□□ 0.31
PCDHGA3-202ENST00000612467 UBE2Q2Q8WVN8 375 aa17■□□□□ 0.31
PCDHGA3-202ENST00000612467 DCAF5Q96JK2 942 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms