RNA–Protein interactions for RNA: ENST00000611947.1

U3.50-201, humanhuman

BASIC

Gene U3, Length 228 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U3.50-201ENST00000611947 DPY19L2Q6NUT2 758 aa12.13□□□□□ -0.47
U3.50-201ENST00000611947 CCDC24Q8N4L8 307 aa12.13□□□□□ -0.47
U3.50-201ENST00000611947 MASTLQ96GX5 879 aa12.13□□□□□ -0.47
U3.50-201ENST00000611947 RRAGCQ9HB90 399 aa12.13□□□□□ -0.47
U3.50-201ENST00000611947 NIP7Q9Y221 180 aaKnown RBP eCLIP12.13□□□□□ -0.47
U3.50-201ENST00000611947 GLTPD2A6NH11 291 aa12.12□□□□□ -0.47
U3.50-201ENST00000611947 NBPF26B4DH59 902 aa12.12□□□□□ -0.47
U3.50-201ENST00000611947 C21orf2O43822 256 aa12.12□□□□□ -0.47
U3.50-201ENST00000611947 SRGNP10124 158 aa12.12□□□□□ -0.47
U3.50-201ENST00000611947 GTF2E1P29083 439 aaPredicted RBP12.12□□□□□ -0.47
U3.50-201ENST00000611947 NBPF10Q6P3W6 841 aaKnown RBP12.12□□□□□ -0.47
U3.50-201ENST00000611947 NBPF15Q8N660 670 aa12.12□□□□□ -0.47
U3.50-201ENST00000611947 VEGFAP15692 232 aaPredicted RBP12.11□□□□□ -0.47
U3.50-201ENST00000611947 LMOD3Q0VAK6 560 aa12.11□□□□□ -0.47
U3.50-201ENST00000611947 KIF6Q6ZMV9 814 aa12.11□□□□□ -0.47
U3.50-201ENST00000611947 TAOK3Q9H2K8 898 aa12.11□□□□□ -0.47
U3.50-201ENST00000611947 ZNF219Q9P2Y4 722 aaPredicted RBP12.11□□□□□ -0.47
U3.50-201ENST00000611947 DLG5Q8TDM6 1919 aa12.11□□□□□ -0.47
U3.50-201ENST00000611947 ANKRD31Q8N7Z5 1873 aa12.1□□□□□ -0.47
U3.50-201ENST00000611947 BCORQ6W2J9 1755 aa12.1□□□□□ -0.47
U3.50-201ENST00000611947 ERVV-1B6SEH8 477 aa12.1□□□□□ -0.47
U3.50-201ENST00000611947 NFKBIEO00221 500 aa12.1□□□□□ -0.47
U3.50-201ENST00000611947 NPR1P16066 1061 aa12.1□□□□□ -0.47
U3.50-201ENST00000611947 RIPK4P57078 832 aa12.1□□□□□ -0.47
U3.50-201ENST00000611947 EIF4A1P60842 406 aaKnown RBP12.1□□□□□ -0.47
U3.50-201ENST00000611947 ERFEQ4G0M1 354 aa12.1□□□□□ -0.47
U3.50-201ENST00000611947 PRPF40BQ6NWY9 871 aaKnown RBP12.1□□□□□ -0.47
U3.50-201ENST00000611947 NGEFQ8N5V2 710 aa12.1□□□□□ -0.47
U3.50-201ENST00000611947 SMC1BQ8NDV3 1235 aa12.1□□□□□ -0.47
U3.50-201ENST00000611947 NYXQ9GZU5 481 aa12.1□□□□□ -0.47
U3.50-201ENST00000611947 BABAM1Q9NWV8 329 aa12.1□□□□□ -0.47
U3.50-201ENST00000611947 RRP7AQ9Y3A4 280 aaKnown RBP12.1□□□□□ -0.47
U3.50-201ENST00000611947 LTBP3Q9NS15 1303 aa12.1□□□□□ -0.47
U3.50-201ENST00000611947 CCDC88AQ3V6T2 1871 aa12.09□□□□□ -0.47
U3.50-201ENST00000611947 ALDH1B1P30837 517 aa12.09□□□□□ -0.47
U3.50-201ENST00000611947 DDX10Q13206 875 aaKnown RBP12.09□□□□□ -0.47
U3.50-201ENST00000611947 TSPYL4Q9UJ04 414 aa12.09□□□□□ -0.47
U3.50-201ENST00000611947 TNRC6CQ9HCJ0 1690 aaKnown RBP12.09□□□□□ -0.47
U3.50-201ENST00000611947 ERBB4Q15303 1308 aa12.09□□□□□ -0.47
U3.50-201ENST00000611947 KLRG2A4D1S0 409 aaPredicted RBP12.08□□□□□ -0.48
U3.50-201ENST00000611947 HLFQ16534 295 aa12.08□□□□□ -0.48
U3.50-201ENST00000611947 THUMPD2Q9BTF0 503 aaKnown RBP12.08□□□□□ -0.48
U3.50-201ENST00000611947 MAP3K15Q6ZN16 1313 aa12.08□□□□□ -0.48
U3.50-201ENST00000611947 MYBBP1AQ9BQG0 1328 aaKnown RBP12.08□□□□□ -0.48
U3.50-201ENST00000611947 FAM177BA6PVY3 158 aa12.07□□□□□ -0.48
U3.50-201ENST00000611947 MYL6BP14649 208 aa12.07□□□□□ -0.48
U3.50-201ENST00000611947 PRELPP51888 382 aa12.07□□□□□ -0.48
U3.50-201ENST00000611947 WDR43Q15061 677 aaKnown RBP eCLIP12.07□□□□□ -0.48
U3.50-201ENST00000611947 CCDC93Q567U6 631 aa12.07□□□□□ -0.48
U3.50-201ENST00000611947 RTKN2Q8IZC4 609 aa12.07□□□□□ -0.48
U3.50-201ENST00000611947 LAMB4A4D0S4 1761 aa12.07□□□□□ -0.48
U3.50-201ENST00000611947 KDM3BQ7LBC6 1761 aa12.07□□□□□ -0.48
U3.50-201ENST00000611947 FER1L6Q2WGJ9 1857 aa12.06□□□□□ -0.48
U3.50-201ENST00000611947 TMPOP42166 694 aaKnown RBP12.06□□□□□ -0.48
U3.50-201ENST00000611947 SLX4Q8IY92 1834 aa12.06□□□□□ -0.48
U3.50-201ENST00000611947 COL11A2P13942 1736 aaPredicted RBP12.06□□□□□ -0.48
U3.50-201ENST00000611947 C7orf43Q8WVR3 580 aa12.05□□□□□ -0.48
U3.50-201ENST00000611947 DICER1Q9UPY3 1922 aaKnown RBP12.05□□□□□ -0.48
U3.50-201ENST00000611947 TIAM2Q8IVF5 1701 aa12.04□□□□□ -0.48
U3.50-201ENST00000611947 EIF2S2P20042 333 aaKnown RBP12.04□□□□□ -0.48
U3.50-201ENST00000611947 FKBP4Q02790 459 aaKnown RBP eCLIP12.04□□□□□ -0.48
U3.50-201ENST00000611947 GRIPAP1Q4V328 841 aa12.04□□□□□ -0.48
U3.50-201ENST00000611947 PARP10Q53GL7 1025 aa12.04□□□□□ -0.48
U3.50-201ENST00000611947 CC2D2BQ6DHV5 1058 aa12.04□□□□□ -0.48
U3.50-201ENST00000611947 GIGYF2Q6Y7W6 1299 aaKnown RBP12.04□□□□□ -0.48
U3.50-201ENST00000611947 TTLL7Q6ZT98 887 aa12.04□□□□□ -0.48
U3.50-201ENST00000611947 PPP1R42Q7Z4L9 355 aa12.04□□□□□ -0.48
U3.50-201ENST00000611947 DNAJC5GQ8N7S2 189 aa12.04□□□□□ -0.48
U3.50-201ENST00000611947 RPGRQ92834 1020 aaKnown RBP12.04□□□□□ -0.48
U3.50-201ENST00000611947 RUNDC1Q96C34 613 aa12.04□□□□□ -0.48
U3.50-201ENST00000611947 TMX4Q9H1E5 349 aaPredicted RBP12.04□□□□□ -0.48
U3.50-201ENST00000611947 ZBTB3Q9H5J0 574 aa12.04□□□□□ -0.48
U3.50-201ENST00000611947 ARFGEF2Q9Y6D5 1785 aa12.04□□□□□ -0.48
U3.50-201ENST00000611947 CACNA1SQ13698 1873 aa12.04□□□□□ -0.48
U3.50-201ENST00000611947 NUP98P52948 1817 aa12.03□□□□□ -0.48
U3.50-201ENST00000611947 IQCA1LA6NCM1 817 aa12.03□□□□□ -0.48
U3.50-201ENST00000611947 GPTP24298 496 aa12.03□□□□□ -0.48
U3.50-201ENST00000611947 NEUROD2Q15784 382 aa12.03□□□□□ -0.48
U3.50-201ENST00000611947 CRY2Q49AN0 593 aa12.03□□□□□ -0.48
U3.50-201ENST00000611947 IBTKQ9P2D0 1353 aaPredicted RBP12.03□□□□□ -0.48
U3.50-201ENST00000611947 HSP90AB3PQ58FF7 597 aa12.02□□□□□ -0.49
U3.50-201ENST00000611947 NUTM1Q86Y26 1132 aa12.02□□□□□ -0.49
U3.50-201ENST00000611947 ZNF34Q8IZ26 560 aa12.02□□□□□ -0.49
U3.50-201ENST00000611947 RBM17Q96I25 401 aaKnown RBP12.02□□□□□ -0.49
U3.50-201ENST00000611947 WDR90Q96KV7 1748 aa12.01□□□□□ -0.49
U3.50-201ENST00000611947 DDNO94850 711 aaPredicted RBP12.01□□□□□ -0.49
U3.50-201ENST00000611947 HOXA10P31260 410 aaPredicted RBP12.01□□□□□ -0.49
U3.50-201ENST00000611947 SUSD4Q5VX71 490 aa12.01□□□□□ -0.49
U3.50-201ENST00000611947 CCDC146Q8IYE0 955 aa12.01□□□□□ -0.49
U3.50-201ENST00000611947 JDP2Q8WYK2 163 aa12.01□□□□□ -0.49
U3.50-201ENST00000611947 KLRG1Q96E93 195 aa12.01□□□□□ -0.49
U3.50-201ENST00000611947 NLRP3Q96P20 1036 aa12.01□□□□□ -0.49
U3.50-201ENST00000611947 UTP14AQ9BVJ6 771 aaKnown RBP12.01□□□□□ -0.49
U3.50-201ENST00000611947 ZNF277Q9NRM2 450 aaPredicted RBP12.01□□□□□ -0.49
U3.50-201ENST00000611947 LAS1LQ9Y4W2 734 aaKnown RBP12.01□□□□□ -0.49
U3.50-201ENST00000611947 POTECB2RU33 542 aa12□□□□□ -0.49
U3.50-201ENST00000611947 CHL1O00533 1208 aa12□□□□□ -0.49
U3.50-201ENST00000611947 IARSP41252 1262 aaKnown RBP12□□□□□ -0.49
U3.50-201ENST00000611947 PDIA6Q15084 440 aa12□□□□□ -0.49
U3.50-201ENST00000611947 SYNE4Q8N205 404 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms