RNA–Protein interactions for RNA: ENST00000610974.1

RN7SL539P-201, Transcript of RNA, 7SL, cytoplasmic 539, pseudogene, humanhuman

BASIC

Gene RN7SL539P, Length 291 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL539P-201ENST00000610974 ST5P78524 1137 aa13.63□□□□□ -0.23
RN7SL539P-201ENST00000610974 CACNA1SQ13698 1873 aa13.63□□□□□ -0.23
RN7SL539P-201ENST00000610974 BTBD11A6QL63 1104 aa13.62□□□□□ -0.23
RN7SL539P-201ENST00000610974 CAPN15O75808 1086 aa13.62□□□□□ -0.23
RN7SL539P-201ENST00000610974 SOGA3Q5TF21 947 aa13.62□□□□□ -0.23
RN7SL539P-201ENST00000610974 CHADLQ6NUI6 762 aa13.62□□□□□ -0.23
RN7SL539P-201ENST00000610974 PRPF40BQ6NWY9 871 aaKnown RBP13.62□□□□□ -0.23
RN7SL539P-201ENST00000610974 DZIP3Q86Y13 1208 aaKnown RBP13.62□□□□□ -0.23
RN7SL539P-201ENST00000610974 MASTLQ96GX5 879 aa13.62□□□□□ -0.23
RN7SL539P-201ENST00000610974 KCNQ3O43525 872 aa13.61□□□□□ -0.23
RN7SL539P-201ENST00000610974 DDNO94850 711 aaPredicted RBP13.61□□□□□ -0.23
RN7SL539P-201ENST00000610974 PHACTR3Q96KR7 559 aa13.61□□□□□ -0.23
RN7SL539P-201ENST00000610974 CREBZFQ9NS37 354 aa13.61□□□□□ -0.23
RN7SL539P-201ENST00000610974 PRKAR2BP31323 418 aa13.6□□□□□ -0.23
RN7SL539P-201ENST00000610974 CNGB1Q14028 1251 aaPredicted RBP13.6□□□□□ -0.23
RN7SL539P-201ENST00000610974 CLEC4GQ6UXB4 293 aa13.6□□□□□ -0.23
RN7SL539P-201ENST00000610974 USP16Q9Y5T5 823 aa13.6□□□□□ -0.23
RN7SL539P-201ENST00000610974 POTEIP0CG38 1075 aa13.59□□□□□ -0.23
RN7SL539P-201ENST00000610974 POTEJP0CG39 1038 aa13.59□□□□□ -0.23
RN7SL539P-201ENST00000610974 NBPF5PQ86XG9 351 aaPredicted RBP13.59□□□□□ -0.23
RN7SL539P-201ENST00000610974 C7orf43Q8WVR3 580 aa13.59□□□□□ -0.23
RN7SL539P-201ENST00000610974 RSPH6AQ9H0K4 717 aa13.59□□□□□ -0.23
RN7SL539P-201ENST00000610974 SCN4AP35499 1836 aa13.58□□□□□ -0.24
RN7SL539P-201ENST00000610974 IQCA1LA6NCM1 817 aa13.58□□□□□ -0.24
RN7SL539P-201ENST00000610974 PIP4K2AP48426 406 aaPredicted RBP13.58□□□□□ -0.24
RN7SL539P-201ENST00000610974 CFAP53Q96M91 514 aa13.58□□□□□ -0.24
RN7SL539P-201ENST00000610974 ZNF652Q9Y2D9 606 aa13.58□□□□□ -0.24
RN7SL539P-201ENST00000610974 PRAMEF22A3QJZ6 481 aa13.57□□□□□ -0.24
RN7SL539P-201ENST00000610974 KLRG2A4D1S0 409 aaPredicted RBP13.57□□□□□ -0.24
RN7SL539P-201ENST00000610974 SNRPA1P09661 255 aaKnown RBP13.57□□□□□ -0.24
RN7SL539P-201ENST00000610974 NPR1P16066 1061 aa13.57□□□□□ -0.24
RN7SL539P-201ENST00000610974 CCDC93Q567U6 631 aa13.57□□□□□ -0.24
RN7SL539P-201ENST00000610974 L3MBTL3Q96JM7 780 aaPredicted RBP13.57□□□□□ -0.24
RN7SL539P-201ENST00000610974 MKRN1Q9UHC7 482 aaKnown RBP13.57□□□□□ -0.24
RN7SL539P-201ENST00000610974 RGL2O15211 777 aa13.56□□□□□ -0.24
RN7SL539P-201ENST00000610974 TPTE2Q6XPS3 522 aa13.56□□□□□ -0.24
RN7SL539P-201ENST00000610974 LDHDQ86WU2 507 aa13.56□□□□□ -0.24
RN7SL539P-201ENST00000610974 RTF1Q92541 710 aaKnown RBP13.56□□□□□ -0.24
RN7SL539P-201ENST00000610974 TAF1DQ9H5J8 278 aaPredicted RBP13.56□□□□□ -0.24
RN7SL539P-201ENST00000610974 NUDCQ9Y266 331 aa13.56□□□□□ -0.24
RN7SL539P-201ENST00000610974 PASKQ96RG2 1323 aa13.56□□□□□ -0.24
RN7SL539P-201ENST00000610974 NBPF26B4DH59 902 aa13.55□□□□□ -0.24
RN7SL539P-201ENST00000610974 FKBP4Q02790 459 aaKnown RBP eCLIP13.55□□□□□ -0.24
RN7SL539P-201ENST00000610974 NBPF10Q6P3W6 841 aaKnown RBP13.55□□□□□ -0.24
RN7SL539P-201ENST00000610974 MCM10Q7L590 875 aa13.55□□□□□ -0.24
RN7SL539P-201ENST00000610974 NBPF15Q8N660 670 aa13.55□□□□□ -0.24
RN7SL539P-201ENST00000610974 CNTNAP1P78357 1384 aa13.55□□□□□ -0.24
RN7SL539P-201ENST00000610974 RTKN2Q8IZC4 609 aa13.54□□□□□ -0.24
RN7SL539P-201ENST00000610974 ZNF277Q9NRM2 450 aaPredicted RBP13.54□□□□□ -0.24
RN7SL539P-201ENST00000610974 NIP7Q9Y221 180 aaKnown RBP eCLIP13.54□□□□□ -0.24
RN7SL539P-201ENST00000610974 HTATSF1O43719 755 aaKnown RBP13.53□□□□□ -0.24
RN7SL539P-201ENST00000610974 U2AF1L5P0DN76 240 aaPredicted RBP13.53□□□□□ -0.24
RN7SL539P-201ENST00000610974 U2AF1Q01081 240 aaKnown RBP eCLIP13.53□□□□□ -0.24
RN7SL539P-201ENST00000610974 ZNF541Q9H0D2 1346 aa13.53□□□□□ -0.24
RN7SL539P-201ENST00000610974 TMEM88BA6NKF7 163 aa13.52□□□□□ -0.25
RN7SL539P-201ENST00000610974 FAM177BA6PVY3 158 aa13.52□□□□□ -0.25
RN7SL539P-201ENST00000610974 ITGBL1O95965 494 aaPredicted RBP13.52□□□□□ -0.25
RN7SL539P-201ENST00000610974 ALDH1B1P30837 517 aa13.52□□□□□ -0.25
RN7SL539P-201ENST00000610974 DCTN1Q14203 1278 aa13.52□□□□□ -0.25
RN7SL539P-201ENST00000610974 OLFM4Q6UX06 510 aa13.52□□□□□ -0.25
RN7SL539P-201ENST00000610974 HACL1Q9UJ83 578 aa13.52□□□□□ -0.25
RN7SL539P-201ENST00000610974 ADAMTSL1Q8N6G6 1762 aa13.52□□□□□ -0.25
RN7SL539P-201ENST00000610974 FOXN1O15353 648 aa13.51□□□□□ -0.25
RN7SL539P-201ENST00000610974 HLFQ16534 295 aa13.51□□□□□ -0.25
RN7SL539P-201ENST00000610974 EAPPQ56P03 285 aaPredicted RBP13.51□□□□□ -0.25
RN7SL539P-201ENST00000610974 LAMB4A4D0S4 1761 aa13.5□□□□□ -0.25
RN7SL539P-201ENST00000610974 FZD9O00144 591 aa13.5□□□□□ -0.25
RN7SL539P-201ENST00000610974 GTF2E1P29083 439 aaPredicted RBP13.5□□□□□ -0.25
RN7SL539P-201ENST00000610974 PPP2R1AP30153 589 aa13.5□□□□□ -0.25
RN7SL539P-201ENST00000610974 EPHX2P34913 555 aa13.5□□□□□ -0.25
RN7SL539P-201ENST00000610974 IARSP41252 1262 aaKnown RBP13.5□□□□□ -0.25
RN7SL539P-201ENST00000610974 VEGFBP49765 207 aa13.5□□□□□ -0.25
RN7SL539P-201ENST00000610974 TAF7Q15545 349 aaPredicted RBP13.5□□□□□ -0.25
RN7SL539P-201ENST00000610974 PNMA8AQ86V59 439 aaPredicted RBP13.5□□□□□ -0.25
RN7SL539P-201ENST00000610974 SYNE4Q8N205 404 aa13.5□□□□□ -0.25
RN7SL539P-201ENST00000610974 PRDM10Q9NQV6 1147 aa13.5□□□□□ -0.25
RN7SL539P-201ENST00000610974 CLEC11AQ9Y240 323 aa13.5□□□□□ -0.25
RN7SL539P-201ENST00000610974 SNED1Q8TER0 1413 aa13.49□□□□□ -0.25
RN7SL539P-201ENST00000610974 RNF123Q5XPI4 1314 aa13.49□□□□□ -0.25
RN7SL539P-201ENST00000610974 CRY2Q49AN0 593 aa13.49□□□□□ -0.25
RN7SL539P-201ENST00000610974 GPC2Q8N158 579 aa13.49□□□□□ -0.25
RN7SL539P-201ENST00000610974 AIDAQ96BJ3 306 aa13.49□□□□□ -0.25
RN7SL539P-201ENST00000610974 PSMD1Q99460 953 aa13.49□□□□□ -0.25
RN7SL539P-201ENST00000610974 NYXQ9GZU5 481 aa13.49□□□□□ -0.25
RN7SL539P-201ENST00000610974 ERVV-1B6SEH8 477 aa13.48□□□□□ -0.25
RN7SL539P-201ENST00000610974 CTCFP49711 727 aaPredicted RBP13.48□□□□□ -0.25
RN7SL539P-201ENST00000610974 CNTROBQ8N137 903 aa13.48□□□□□ -0.25
RN7SL539P-201ENST00000610974 JDP2Q8WYK2 163 aa13.48□□□□□ -0.25
RN7SL539P-201ENST00000610974 MIS18AQ9NYP9 233 aa13.48□□□□□ -0.25
RN7SL539P-201ENST00000610974 NUP98P52948 1817 aa13.48□□□□□ -0.25
RN7SL539P-201ENST00000610974 ABCC12Q96J65 1359 aa13.47□□□□□ -0.25
RN7SL539P-201ENST00000610974 CC2D2BQ6DHV5 1058 aa13.47□□□□□ -0.25
RN7SL539P-201ENST00000610974 KDM3BQ7LBC6 1761 aa13.47□□□□□ -0.25
RN7SL539P-201ENST00000610974 MAP3K15Q6ZN16 1313 aa13.46□□□□□ -0.25
RN7SL539P-201ENST00000610974 RASSF10A6NK89 507 aa13.46□□□□□ -0.25
RN7SL539P-201ENST00000610974 DEFB115Q30KQ5 88 aa13.46□□□□□ -0.25
RN7SL539P-201ENST00000610974 GRIPAP1Q4V328 841 aa13.46□□□□□ -0.25
RN7SL539P-201ENST00000610974 MAP1SQ66K74 1059 aaPredicted RBP13.46□□□□□ -0.25
RN7SL539P-201ENST00000610974 NUTM1Q86Y26 1132 aa13.46□□□□□ -0.25
RN7SL539P-201ENST00000610974 NGEFQ8N5V2 710 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms