RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 RFC4P35249 363 aa8.62□□□□□ -1.03
CSDE1-218ENST00000610726 MAP3K12Q12852 859 aa8.62□□□□□ -1.03
CSDE1-218ENST00000610726 TRIM22Q8IYM9 498 aa8.62□□□□□ -1.03
CSDE1-218ENST00000610726 NAPBQ9H115 298 aa8.62□□□□□ -1.03
CSDE1-218ENST00000610726 USP19O94966 1318 aa8.62□□□□□ -1.03
CSDE1-218ENST00000610726 DZIP3Q86Y13 1208 aaKnown RBP8.62□□□□□ -1.03
CSDE1-218ENST00000610726 CIZ1Q9ULV3 898 aaPredicted RBP8.62□□□□□ -1.03
CSDE1-218ENST00000610726 NIP7Q9Y221 180 aaKnown RBP eCLIP8.62□□□□□ -1.03
CSDE1-218ENST00000610726 KINO60870 393 aaKnown RBP8.62□□□□□ -1.03
CSDE1-218ENST00000610726 PPFIA3O75145 1194 aa8.62□□□□□ -1.03
CSDE1-218ENST00000610726 SEC24BO95487 1268 aa8.62□□□□□ -1.03
CSDE1-218ENST00000610726 NASPP49321 788 aaPredicted RBP8.62□□□□□ -1.03
CSDE1-218ENST00000610726 HAND2P61296 217 aa8.62□□□□□ -1.03
CSDE1-218ENST00000610726 KRT85P78386 507 aa8.62□□□□□ -1.03
CSDE1-218ENST00000610726 NBPF5PQ86XG9 351 aaPredicted RBP8.62□□□□□ -1.03
CSDE1-218ENST00000610726 ZSCAN29Q8IWY8 852 aaPredicted RBP8.62□□□□□ -1.03
CSDE1-218ENST00000610726 CCDC82Q8N4S0 544 aa8.62□□□□□ -1.03
CSDE1-218ENST00000610726 OTUD7AQ8TE49 926 aaPredicted RBP8.62□□□□□ -1.03
CSDE1-218ENST00000610726 KDM5AP29375 1690 aaKnown RBP8.62□□□□□ -1.03
CSDE1-218ENST00000610726 ME1P48163 572 aa8.61□□□□□ -1.03
CSDE1-218ENST00000610726 TCEANC2Q96MN5 208 aa8.61□□□□□ -1.03
CSDE1-218ENST00000610726 PLEKHF1Q96S99 279 aa8.61□□□□□ -1.03
CSDE1-218ENST00000610726 KLHDC4Q8TBB5 520 aa8.61□□□□□ -1.03
CSDE1-218ENST00000610726 CDC5LQ99459 802 aaKnown RBP8.61□□□□□ -1.03
CSDE1-218ENST00000610726 SLC52A2Q9HAB3 445 aa8.61□□□□□ -1.03
CSDE1-218ENST00000610726 HOOK1Q9UJC3 728 aaKnown RBP8.61□□□□□ -1.03
CSDE1-218ENST00000610726 PLXNC1O60486 1568 aa8.61□□□□□ -1.03
CSDE1-218ENST00000610726 C6orf229H3BNL8 230 aa8.61□□□□□ -1.03
CSDE1-218ENST00000610726 MRE11P49959 708 aa8.61□□□□□ -1.03
CSDE1-218ENST00000610726 PLEKHM2Q8IWE5 1019 aa8.61□□□□□ -1.03
CSDE1-218ENST00000610726 HELBQ8NG08 1087 aaPredicted RBP8.61□□□□□ -1.03
CSDE1-218ENST00000610726 RPGRQ92834 1020 aaKnown RBP8.61□□□□□ -1.03
CSDE1-218ENST00000610726 BICC1Q9H694 974 aaKnown RBP8.61□□□□□ -1.03
CSDE1-218ENST00000610726 TCEAL9Q9UHQ7 104 aa8.61□□□□□ -1.03
CSDE1-218ENST00000610726 ARAP3Q8WWN8 1544 aa8.61□□□□□ -1.03
CSDE1-218ENST00000610726 NLRP1Q9C000 1473 aa8.61□□□□□ -1.03
CSDE1-218ENST00000610726 NBPF7P0C2Y1 421 aaPredicted RBP8.61□□□□□ -1.03
CSDE1-218ENST00000610726 FAM89AQ96GI7 184 aa8.61□□□□□ -1.03
CSDE1-218ENST00000610726 CDC42BPBQ9Y5S2 1711 aa8.6□□□□□ -1.03
CSDE1-218ENST00000610726 EIF4A1P60842 406 aaKnown RBP8.6□□□□□ -1.03
CSDE1-218ENST00000610726 BCL11BQ9C0K0 894 aaPredicted RBP8.6□□□□□ -1.03
CSDE1-218ENST00000610726 ZNF213O14771 459 aa8.6□□□□□ -1.03
CSDE1-218ENST00000610726 SSFA2P28290 1259 aa8.6□□□□□ -1.03
CSDE1-218ENST00000610726 PRIM1P49642 420 aaKnown RBP8.6□□□□□ -1.03
CSDE1-218ENST00000610726 ATP2B3Q16720 1220 aa8.6□□□□□ -1.03
CSDE1-218ENST00000610726 DZIP1Q86YF9 867 aaKnown RBP8.6□□□□□ -1.03
CSDE1-218ENST00000610726 ZNF396Q96N95 335 aaPredicted RBP8.6□□□□□ -1.03
CSDE1-218ENST00000610726 ARHGAP31Q2M1Z3 1444 aa8.6□□□□□ -1.03
CSDE1-218ENST00000610726 KIF1BO60333 1816 aa8.6□□□□□ -1.03
CSDE1-218ENST00000610726 RNF123Q5XPI4 1314 aa8.6□□□□□ -1.03
CSDE1-218ENST00000610726 CLASP1Q7Z460 1538 aa8.6□□□□□ -1.03
CSDE1-218ENST00000610726 TET3O43151 1660 aa8.6□□□□□ -1.03
CSDE1-218ENST00000610726 CCT2P78371 535 aaKnown RBP8.6□□□□□ -1.03
CSDE1-218ENST00000610726 SMARCC1Q92922 1105 aaPredicted RBP8.6□□□□□ -1.03
CSDE1-218ENST00000610726 LIMCH1Q9UPQ0 1083 aa8.6□□□□□ -1.03
CSDE1-218ENST00000610726 SOS1Q07889 1333 aaPredicted RBP8.6□□□□□ -1.03
CSDE1-218ENST00000610726 USP5P45974 858 aa8.59□□□□□ -1.03
CSDE1-218ENST00000610726 GUCY1B3Q02153 619 aa8.59□□□□□ -1.03
CSDE1-218ENST00000610726 SETDB2Q96T68 719 aa8.59□□□□□ -1.03
CSDE1-218ENST00000610726 NPHP4O75161 1426 aaPredicted RBP8.59□□□□□ -1.03
CSDE1-218ENST00000610726 IQGAP3Q86VI3 1631 aa8.59□□□□□ -1.03
CSDE1-218ENST00000610726 PNMA6EA0A0J9YXQ4 647 aa8.59□□□□□ -1.03
CSDE1-218ENST00000610726 IL15P40933 162 aaPredicted RBP8.59□□□□□ -1.03
CSDE1-218ENST00000610726 CCDC152Q4G0S7 254 aa8.59□□□□□ -1.03
CSDE1-218ENST00000610726 DNAJC10Q8IXB1 793 aa8.59□□□□□ -1.03
CSDE1-218ENST00000610726 MPNDQ8N594 471 aa8.59□□□□□ -1.03
CSDE1-218ENST00000610726 CCDC47Q96A33 483 aaKnown RBP8.59□□□□□ -1.03
CSDE1-218ENST00000610726 ESYT1Q9BSJ8 1104 aa8.59□□□□□ -1.03
CSDE1-218ENST00000610726 RANBP6O60518 1105 aaKnown RBP8.59□□□□□ -1.03
CSDE1-218ENST00000610726 ARHGEF25Q86VW2 580 aa8.59□□□□□ -1.03
CSDE1-218ENST00000610726 SPATA32Q96LK8 384 aa8.59□□□□□ -1.03
CSDE1-218ENST00000610726 BABAM1Q9NWV8 329 aa8.59□□□□□ -1.03
CSDE1-218ENST00000610726 USP16Q9Y5T5 823 aa8.59□□□□□ -1.03
CSDE1-218ENST00000610726 ARHGEF10O15013 1369 aa8.59□□□□□ -1.03
CSDE1-218ENST00000610726 INSRP06213 1382 aa8.59□□□□□ -1.03
CSDE1-218ENST00000610726 CLTCL1P53675 1640 aa8.59□□□□□ -1.03
CSDE1-218ENST00000610726 A2ML1A8K2U0 1454 aa8.59□□□□□ -1.04
CSDE1-218ENST00000610726 IRS4O14654 1257 aaPredicted RBP8.58□□□□□ -1.04
CSDE1-218ENST00000610726 FAM98CQ17RN3 349 aaKnown RBP8.58□□□□□ -1.04
CSDE1-218ENST00000610726 RAB11FIP4Q86YS3 637 aa8.58□□□□□ -1.04
CSDE1-218ENST00000610726 USP6P35125 1406 aa8.58□□□□□ -1.04
CSDE1-218ENST00000610726 HOXB7P09629 217 aa8.58□□□□□ -1.04
CSDE1-218ENST00000610726 TSR1Q2NL82 804 aaKnown RBP8.58□□□□□ -1.04
CSDE1-218ENST00000610726 PCMTD1Q96MG8 357 aaPredicted RBP8.58□□□□□ -1.04
CSDE1-218ENST00000610726 LRRC2Q9BYS8 371 aa8.58□□□□□ -1.04
CSDE1-218ENST00000610726 POLR3DP05423 398 aaPredicted RBP8.58□□□□□ -1.04
CSDE1-218ENST00000610726 TIMM10P62072 90 aa8.58□□□□□ -1.04
CSDE1-218ENST00000610726 TFCP2Q12800 502 aa8.58□□□□□ -1.04
CSDE1-218ENST00000610726 SLC4A8Q2Y0W8 1093 aa8.58□□□□□ -1.04
CSDE1-218ENST00000610726 NLRP3Q96P20 1036 aa8.58□□□□□ -1.04
CSDE1-218ENST00000610726 GDPD2Q9HCC8 539 aa8.58□□□□□ -1.04
CSDE1-218ENST00000610726 FAM135BQ49AJ0 1406 aa8.58□□□□□ -1.04
CSDE1-218ENST00000610726 GIGYF1O75420 1035 aaPredicted RBP8.58□□□□□ -1.04
CSDE1-218ENST00000610726 MKNK2Q9HBH9 465 aa8.58□□□□□ -1.04
CSDE1-218ENST00000610726 CDKL5O76039 1030 aa8.57□□□□□ -1.04
CSDE1-218ENST00000610726 TPM3P06753 285 aa8.57□□□□□ -1.04
CSDE1-218ENST00000610726 ANKRD18AQ8IVF6 992 aa8.57□□□□□ -1.04
CSDE1-218ENST00000610726 ZNF592Q92610 1267 aa8.57□□□□□ -1.04
CSDE1-218ENST00000610726 TNPO1Q92973 898 aaKnown RBP8.57□□□□□ -1.04
CSDE1-218ENST00000610726 METTL22Q9BUU2 404 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms