RNA–Protein interactions for RNA: ENST00000608788.5

LINC01278-203, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 5 BASIC

Gene LINC01278, Length 820 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-203ENST00000608788 STYK1Q6J9G0 422 aa19.33■□□□□ 0.68
LINC01278-203ENST00000608788 PRPF40BQ6NWY9 871 aaKnown RBP19.33■□□□□ 0.68
LINC01278-203ENST00000608788 C7orf43Q8WVR3 580 aa19.33■□□□□ 0.68
LINC01278-203ENST00000608788 TAF1DQ9H5J8 278 aaPredicted RBP19.33■□□□□ 0.68
LINC01278-203ENST00000608788 ADAMTSL1Q8N6G6 1762 aa19.33■□□□□ 0.68
LINC01278-203ENST00000608788 SLC34A2O95436 690 aa19.32■□□□□ 0.68
LINC01278-203ENST00000608788 HMOX1P09601 288 aa19.32■□□□□ 0.68
LINC01278-203ENST00000608788 VEGFBP49765 207 aa19.32■□□□□ 0.68
LINC01278-203ENST00000608788 AMER1Q5JTC6 1135 aaPredicted RBP19.32■□□□□ 0.68
LINC01278-203ENST00000608788 ZNF496Q96IT1 587 aaPredicted RBP19.32■□□□□ 0.68
LINC01278-203ENST00000608788 WBP1LQ9NX94 342 aa19.32■□□□□ 0.68
LINC01278-203ENST00000608788 HEG1Q9ULI3 1381 aa19.32■□□□□ 0.68
LINC01278-203ENST00000608788 IQCA1LA6NCM1 817 aa19.31■□□□□ 0.68
LINC01278-203ENST00000608788 CTCFP49711 727 aaPredicted RBP19.31■□□□□ 0.68
LINC01278-203ENST00000608788 CNKSR1Q969H4 720 aa19.31■□□□□ 0.68
LINC01278-203ENST00000608788 TBC1D2BQ9UPU7 963 aa19.31■□□□□ 0.68
LINC01278-203ENST00000608788 SIPA1L3O60292 1781 aaPredicted RBP19.31■□□□□ 0.68
LINC01278-203ENST00000608788 CAMTA2O94983 1202 aa19.3■□□□□ 0.68
LINC01278-203ENST00000608788 HSPA5P11021 654 aaKnown RBP19.3■□□□□ 0.68
LINC01278-203ENST00000608788 IL6STP40189 918 aaPredicted RBP19.3■□□□□ 0.68
LINC01278-203ENST00000608788 SOGA3Q5TF21 947 aa19.3■□□□□ 0.68
LINC01278-203ENST00000608788 CACNA1SQ13698 1873 aa19.3■□□□□ 0.68
LINC01278-203ENST00000608788 BCORQ6W2J9 1755 aa19.29■□□□□ 0.68
LINC01278-203ENST00000608788 TMEM88BA6NKF7 163 aa19.29■□□□□ 0.68
LINC01278-203ENST00000608788 ZNF790Q6PG37 636 aa19.29■□□□□ 0.68
LINC01278-203ENST00000608788 CNBD1Q8NA66 436 aa19.29■□□□□ 0.68
LINC01278-203ENST00000608788 EIF4G2P78344 907 aaKnown RBP eCLIP19.28■□□□□ 0.68
LINC01278-203ENST00000608788 TTC5Q8N0Z6 440 aa19.28■□□□□ 0.68
LINC01278-203ENST00000608788 MASTLQ96GX5 879 aa19.28■□□□□ 0.68
LINC01278-203ENST00000608788 SETDB2Q96T68 719 aa19.28■□□□□ 0.68
LINC01278-203ENST00000608788 TEX13AQ9BXU3 409 aaPredicted RBP19.28■□□□□ 0.68
LINC01278-203ENST00000608788 KNSTRNQ9Y448 316 aa19.28■□□□□ 0.68
LINC01278-203ENST00000608788 IL17REQ8NFR9 667 aa19.27■□□□□ 0.68
LINC01278-203ENST00000608788 ZNF541Q9H0D2 1346 aa19.26■□□□□ 0.67
LINC01278-203ENST00000608788 KLRG2A4D1S0 409 aaPredicted RBP19.26■□□□□ 0.67
LINC01278-203ENST00000608788 RASSF10A6NK89 507 aa19.26■□□□□ 0.67
LINC01278-203ENST00000608788 LBX1P52954 281 aa19.26■□□□□ 0.67
LINC01278-203ENST00000608788 AIDAQ96BJ3 306 aa19.26■□□□□ 0.67
LINC01278-203ENST00000608788 A1BGP04217 495 aa19.25■□□□□ 0.67
LINC01278-203ENST00000608788 ST5P78524 1137 aa19.25■□□□□ 0.67
LINC01278-203ENST00000608788 HSPA8P11142 646 aaKnown RBP19.24■□□□□ 0.67
LINC01278-203ENST00000608788 CCDC93Q567U6 631 aa19.24■□□□□ 0.67
LINC01278-203ENST00000608788 COL3A1P02461 1466 aaPredicted RBP19.23■□□□□ 0.67
LINC01278-203ENST00000608788 CEMIPQ8WUJ3 1361 aa19.23■□□□□ 0.67
LINC01278-203ENST00000608788 FKBP4Q02790 459 aaKnown RBP eCLIP19.23■□□□□ 0.67
LINC01278-203ENST00000608788 ZNF330Q9Y3S2 320 aaPredicted RBP19.23■□□□□ 0.67
LINC01278-203ENST00000608788 SNED1Q8TER0 1413 aa19.23■□□□□ 0.67
LINC01278-203ENST00000608788 THSD7BQ9C0I4 1608 aa19.22■□□□□ 0.67
LINC01278-203ENST00000608788 DIAPH1O60610 1272 aaKnown RBP19.22■□□□□ 0.67
LINC01278-203ENST00000608788 ABHD8Q96I13 439 aa19.22■□□□□ 0.67
LINC01278-203ENST00000608788 ZNF277Q9NRM2 450 aaPredicted RBP19.22■□□□□ 0.67
LINC01278-203ENST00000608788 HACL1Q9UJ83 578 aa19.22■□□□□ 0.67
LINC01278-203ENST00000608788 FZD9O00144 591 aa19.21■□□□□ 0.67
LINC01278-203ENST00000608788 NPR1P16066 1061 aa19.21■□□□□ 0.67
LINC01278-203ENST00000608788 EPHX2P34913 555 aa19.21■□□□□ 0.67
LINC01278-203ENST00000608788 TEFQ10587 303 aa19.21■□□□□ 0.67
LINC01278-203ENST00000608788 CLEC4GQ6UXB4 293 aa19.21■□□□□ 0.67
LINC01278-203ENST00000608788 DZIP3Q86Y13 1208 aaKnown RBP19.21■□□□□ 0.67
LINC01278-203ENST00000608788 FMNL2Q96PY5 1086 aa19.21■□□□□ 0.67
LINC01278-203ENST00000608788 CLSPNQ9HAW4 1339 aa19.21■□□□□ 0.67
LINC01278-203ENST00000608788 GNAT3A8MTJ3 354 aa19.2■□□□□ 0.66
LINC01278-203ENST00000608788 EAPPQ56P03 285 aaPredicted RBP19.2■□□□□ 0.66
LINC01278-203ENST00000608788 OLFM4Q6UX06 510 aa19.2■□□□□ 0.66
LINC01278-203ENST00000608788 CNTROBQ8N137 903 aa19.2■□□□□ 0.66
LINC01278-203ENST00000608788 KCNQ3O43525 872 aa19.19■□□□□ 0.66
LINC01278-203ENST00000608788 DEFB115Q30KQ5 88 aa19.19■□□□□ 0.66
LINC01278-203ENST00000608788 PNMA8AQ86V59 439 aaPredicted RBP19.19■□□□□ 0.66
LINC01278-203ENST00000608788 RNF123Q5XPI4 1314 aa19.19■□□□□ 0.66
LINC01278-203ENST00000608788 NPHP1O15259 732 aa19.18■□□□□ 0.66
LINC01278-203ENST00000608788 PER1O15534 1290 aaPredicted RBP19.18■□□□□ 0.66
LINC01278-203ENST00000608788 FAM161AQ3B820 660 aa19.18■□□□□ 0.66
LINC01278-203ENST00000608788 MAP1SQ66K74 1059 aaPredicted RBP19.18■□□□□ 0.66
LINC01278-203ENST00000608788 NBPF5PQ86XG9 351 aaPredicted RBP19.18■□□□□ 0.66
LINC01278-203ENST00000608788 GAS2L2Q8NHY3 880 aa19.18■□□□□ 0.66
LINC01278-203ENST00000608788 USP16Q9Y5T5 823 aa19.18■□□□□ 0.66
LINC01278-203ENST00000608788 WDR33Q9C0J8 1336 aaKnown RBP19.18■□□□□ 0.66
LINC01278-203ENST00000608788 RGL2O15211 777 aa19.17■□□□□ 0.66
LINC01278-203ENST00000608788 TNRC18O15417 2968 aaPredicted RBP19.17■□□□□ 0.66
LINC01278-203ENST00000608788 MAP2K1Q02750 393 aaPredicted RBP19.17■□□□□ 0.66
LINC01278-203ENST00000608788 RTKN2Q8IZC4 609 aa19.17■□□□□ 0.66
LINC01278-203ENST00000608788 GPC2Q8N158 579 aa19.17■□□□□ 0.66
LINC01278-203ENST00000608788 COL4A5P29400 1685 aa19.17■□□□□ 0.66
LINC01278-203ENST00000608788 LTBP1Q14766 1721 aa19.17■□□□□ 0.66
LINC01278-203ENST00000608788 PIP4K2AP48426 406 aaPredicted RBP19.16■□□□□ 0.66
LINC01278-203ENST00000608788 CLEC11AQ9Y240 323 aa19.16■□□□□ 0.66
LINC01278-203ENST00000608788 PRAMEF22A3QJZ6 481 aa19.15■□□□□ 0.66
LINC01278-203ENST00000608788 IARSP41252 1262 aaKnown RBP19.15■□□□□ 0.66
LINC01278-203ENST00000608788 RGS19P49795 217 aa19.15■□□□□ 0.66
LINC01278-203ENST00000608788 NPM2Q86SE8 214 aaKnown RBP19.15■□□□□ 0.66
LINC01278-203ENST00000608788 SYNE4Q8N205 404 aa19.14■□□□□ 0.65
LINC01278-203ENST00000608788 PSMD1Q99460 953 aa19.14■□□□□ 0.65
LINC01278-203ENST00000608788 DDX21Q9NR30 783 aaKnown RBP eCLIP19.14■□□□□ 0.65
LINC01278-203ENST00000608788 BTBD11A6QL63 1104 aa19.13■□□□□ 0.65
LINC01278-203ENST00000608788 TRIM26Q12899 539 aaPredicted RBP19.13■□□□□ 0.65
LINC01278-203ENST00000608788 TPTE2Q6XPS3 522 aa19.13■□□□□ 0.65
LINC01278-203ENST00000608788 ZNF652Q9Y2D9 606 aa19.13■□□□□ 0.65
LINC01278-203ENST00000608788 NBPF26B4DH59 902 aa19.12■□□□□ 0.65
LINC01278-203ENST00000608788 CRY2Q49AN0 593 aa19.12■□□□□ 0.65
LINC01278-203ENST00000608788 NBPF10Q6P3W6 841 aaKnown RBP19.12■□□□□ 0.65
LINC01278-203ENST00000608788 NBPF15Q8N660 670 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms