RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 NBPF10Q6P3W6 841 aaKnown RBP17.79■□□□□ 0.44
POLR2J3-219ENST00000608621 NBPF15Q8N660 670 aa17.79■□□□□ 0.44
POLR2J3-219ENST00000608621 NEFMP07197 916 aa17.78■□□□□ 0.44
POLR2J3-219ENST00000608621 SRGNP10124 158 aa17.78■□□□□ 0.44
POLR2J3-219ENST00000608621 STYK1Q6J9G0 422 aa17.78■□□□□ 0.44
POLR2J3-219ENST00000608621 NBPF5PQ86XG9 351 aaPredicted RBP17.78■□□□□ 0.44
POLR2J3-219ENST00000608621 CNKSR1Q969H4 720 aa17.78■□□□□ 0.44
POLR2J3-219ENST00000608621 DPY19L2Q6NUT2 758 aa17.77■□□□□ 0.44
POLR2J3-219ENST00000608621 SMC1BQ8NDV3 1235 aa17.77■□□□□ 0.44
POLR2J3-219ENST00000608621 MASTLQ96GX5 879 aa17.77■□□□□ 0.44
POLR2J3-219ENST00000608621 ZNF652Q9Y2D9 606 aa17.77■□□□□ 0.44
POLR2J3-219ENST00000608621 TNRC6CQ9HCJ0 1690 aaKnown RBP17.77■□□□□ 0.43
POLR2J3-219ENST00000608621 ERFEQ4G0M1 354 aa17.76■□□□□ 0.43
POLR2J3-219ENST00000608621 PRPF40BQ6NWY9 871 aaKnown RBP17.75■□□□□ 0.43
POLR2J3-219ENST00000608621 TPTE2Q6XPS3 522 aa17.75■□□□□ 0.43
POLR2J3-219ENST00000608621 NIP7Q9Y221 180 aaKnown RBP eCLIP17.75■□□□□ 0.43
POLR2J3-219ENST00000608621 BCORQ6W2J9 1755 aa17.75■□□□□ 0.43
POLR2J3-219ENST00000608621 COL11A2P13942 1736 aaPredicted RBP17.75■□□□□ 0.43
POLR2J3-219ENST00000608621 SLX4Q8IY92 1834 aa17.75■□□□□ 0.43
POLR2J3-219ENST00000608621 FAM177BA6PVY3 158 aa17.74■□□□□ 0.43
POLR2J3-219ENST00000608621 POTECB2RU33 542 aa17.74■□□□□ 0.43
POLR2J3-219ENST00000608621 HLFQ16534 295 aa17.74■□□□□ 0.43
POLR2J3-219ENST00000608621 PNISRQ8TF01 805 aaKnown RBP17.74■□□□□ 0.43
POLR2J3-219ENST00000608621 PLEKHF1Q96S99 279 aa17.74■□□□□ 0.43
POLR2J3-219ENST00000608621 WDR90Q96KV7 1748 aa17.74■□□□□ 0.43
POLR2J3-219ENST00000608621 FER1L6Q2WGJ9 1857 aa17.73■□□□□ 0.43
POLR2J3-219ENST00000608621 NGEFQ8N5V2 710 aa17.73■□□□□ 0.43
POLR2J3-219ENST00000608621 KLRG1Q96E93 195 aa17.73■□□□□ 0.43
POLR2J3-219ENST00000608621 TAOK3Q9H2K8 898 aa17.73■□□□□ 0.43
POLR2J3-219ENST00000608621 LTBP3Q9NS15 1303 aa17.72■□□□□ 0.43
POLR2J3-219ENST00000608621 KLRG2A4D1S0 409 aaPredicted RBP17.72■□□□□ 0.43
POLR2J3-219ENST00000608621 RGL2O15211 777 aa17.72■□□□□ 0.43
POLR2J3-219ENST00000608621 NPR1P16066 1061 aa17.72■□□□□ 0.43
POLR2J3-219ENST00000608621 NFE2L2Q16236 605 aa17.72■□□□□ 0.43
POLR2J3-219ENST00000608621 SOGA3Q5TF21 947 aa17.72■□□□□ 0.43
POLR2J3-219ENST00000608621 C7orf43Q8WVR3 580 aa17.72■□□□□ 0.43
POLR2J3-219ENST00000608621 THUMPD2Q9BTF0 503 aaKnown RBP17.72■□□□□ 0.43
POLR2J3-219ENST00000608621 TIAM2Q8IVF5 1701 aa17.72■□□□□ 0.43
POLR2J3-219ENST00000608621 DLG5Q8TDM6 1919 aa17.71■□□□□ 0.43
POLR2J3-219ENST00000608621 EIF4A1P60842 406 aaKnown RBP17.71■□□□□ 0.43
POLR2J3-219ENST00000608621 RRP7AQ9Y3A4 280 aaKnown RBP17.71■□□□□ 0.43
POLR2J3-219ENST00000608621 CACNA1SQ13698 1873 aa17.71■□□□□ 0.43
POLR2J3-219ENST00000608621 DICER1Q9UPY3 1922 aaKnown RBP17.7■□□□□ 0.42
POLR2J3-219ENST00000608621 GTF2E1P29083 439 aaPredicted RBP17.7■□□□□ 0.42
POLR2J3-219ENST00000608621 PNNQ9H307 717 aaKnown RBP17.7■□□□□ 0.42
POLR2J3-219ENST00000608621 DDNO94850 711 aaPredicted RBP17.69■□□□□ 0.42
POLR2J3-219ENST00000608621 ERVV-1B6SEH8 477 aa17.68■□□□□ 0.42
POLR2J3-219ENST00000608621 MYL6BP14649 208 aa17.68■□□□□ 0.42
POLR2J3-219ENST00000608621 CCDC93Q567U6 631 aa17.68■□□□□ 0.42
POLR2J3-219ENST00000608621 TTLL7Q6ZT98 887 aa17.68■□□□□ 0.42
POLR2J3-219ENST00000608621 JMYQ8N9B5 988 aa17.68■□□□□ 0.42
POLR2J3-219ENST00000608621 MAPK8IP3Q9UPT6 1336 aa17.68■□□□□ 0.42
POLR2J3-219ENST00000608621 ALDH1B1P30837 517 aa17.67■□□□□ 0.42
POLR2J3-219ENST00000608621 OLFM4Q6UX06 510 aa17.67■□□□□ 0.42
POLR2J3-219ENST00000608621 NUTM1Q86Y26 1132 aa17.66■□□□□ 0.42
POLR2J3-219ENST00000608621 MAP3K15Q6ZN16 1313 aa17.66■□□□□ 0.42
POLR2J3-219ENST00000608621 ARFGEF2Q9Y6D5 1785 aa17.66■□□□□ 0.42
POLR2J3-219ENST00000608621 FKBP4Q02790 459 aaKnown RBP eCLIP17.65■□□□□ 0.42
POLR2J3-219ENST00000608621 KIF6Q6ZMV9 814 aa17.65■□□□□ 0.42
POLR2J3-219ENST00000608621 NYXQ9GZU5 481 aa17.65■□□□□ 0.42
POLR2J3-219ENST00000608621 KDM3BQ7LBC6 1761 aa17.65■□□□□ 0.42
POLR2J3-219ENST00000608621 LAMB4A4D0S4 1761 aa17.64■□□□□ 0.41
POLR2J3-219ENST00000608621 GPTP24298 496 aa17.64■□□□□ 0.41
POLR2J3-219ENST00000608621 RIPK4P57078 832 aa17.64■□□□□ 0.41
POLR2J3-219ENST00000608621 RTKN2Q8IZC4 609 aa17.64■□□□□ 0.41
POLR2J3-219ENST00000608621 ZBTB3Q9H5J0 574 aa17.64■□□□□ 0.41
POLR2J3-219ENST00000608621 ZNF277Q9NRM2 450 aaPredicted RBP17.64■□□□□ 0.41
POLR2J3-219ENST00000608621 NUP98P52948 1817 aa17.63■□□□□ 0.41
POLR2J3-219ENST00000608621 POTEIP0CG38 1075 aa17.63■□□□□ 0.41
POLR2J3-219ENST00000608621 POTEJP0CG39 1038 aa17.63■□□□□ 0.41
POLR2J3-219ENST00000608621 RALBP1Q15311 655 aa17.63■□□□□ 0.41
POLR2J3-219ENST00000608621 CHADLQ6NUI6 762 aa17.63■□□□□ 0.41
POLR2J3-219ENST00000608621 SYNE4Q8N205 404 aa17.63■□□□□ 0.41
POLR2J3-219ENST00000608621 TSPYL4Q9UJ04 414 aa17.63■□□□□ 0.41
POLR2J3-219ENST00000608621 EIF2S2P20042 333 aaKnown RBP17.62■□□□□ 0.41
POLR2J3-219ENST00000608621 SUSD4Q5VX71 490 aa17.62■□□□□ 0.41
POLR2J3-219ENST00000608621 CRY2Q49AN0 593 aa17.61■□□□□ 0.41
POLR2J3-219ENST00000608621 GIGYF2Q6Y7W6 1299 aaKnown RBP17.61■□□□□ 0.41
POLR2J3-219ENST00000608621 ZNF34Q8IZ26 560 aa17.61■□□□□ 0.41
POLR2J3-219ENST00000608621 UBN2Q6ZU65 1347 aa17.61■□□□□ 0.41
POLR2J3-219ENST00000608621 ABCC12Q96J65 1359 aa17.61■□□□□ 0.41
POLR2J3-219ENST00000608621 IQCA1LA6NCM1 817 aa17.6■□□□□ 0.41
POLR2J3-219ENST00000608621 IARSP41252 1262 aaKnown RBP17.6■□□□□ 0.41
POLR2J3-219ENST00000608621 TMPOP42166 694 aaKnown RBP17.6■□□□□ 0.41
POLR2J3-219ENST00000608621 L3MBTL3Q96JM7 780 aaPredicted RBP17.6■□□□□ 0.41
POLR2J3-219ENST00000608621 ERBB4Q15303 1308 aa17.6■□□□□ 0.41
POLR2J3-219ENST00000608621 ZNF541Q9H0D2 1346 aa17.59■□□□□ 0.41
POLR2J3-219ENST00000608621 DDX10Q13206 875 aaKnown RBP17.59■□□□□ 0.41
POLR2J3-219ENST00000608621 PDIA6Q15084 440 aa17.59■□□□□ 0.41
POLR2J3-219ENST00000608621 RPGRQ92834 1020 aaKnown RBP17.59■□□□□ 0.41
POLR2J3-219ENST00000608621 TAF1DQ9H5J8 278 aaPredicted RBP17.59■□□□□ 0.41
POLR2J3-219ENST00000608621 HOXA10P31260 410 aaPredicted RBP17.58■□□□□ 0.4
POLR2J3-219ENST00000608621 COL13A1Q5TAT6 717 aaPredicted RBP17.58■□□□□ 0.4
POLR2J3-219ENST00000608621 LRP10Q7Z4F1 713 aa17.58■□□□□ 0.4
POLR2J3-219ENST00000608621 PSMD1Q99460 953 aa17.58■□□□□ 0.4
POLR2J3-219ENST00000608621 BABAM1Q9NWV8 329 aa17.58■□□□□ 0.4
POLR2J3-219ENST00000608621 FZD9O00144 591 aa17.57■□□□□ 0.4
POLR2J3-219ENST00000608621 NTSR2O95665 410 aa17.57■□□□□ 0.4
POLR2J3-219ENST00000608621 ANXA1P04083 346 aa17.57■□□□□ 0.4
POLR2J3-219ENST00000608621 NEUROD2Q15784 382 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms