RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 ZBTB3Q9H5J0 574 aa12.27□□□□□ -0.45
CTCFL-216ENST00000608263 ZHX1Q9UKY1 873 aaPredicted RBP12.27□□□□□ -0.45
CTCFL-216ENST00000608263 LMTK3Q96Q04 1460 aa12.26□□□□□ -0.45
CTCFL-216ENST00000608263 RTL1A6NKG5 1358 aa12.26□□□□□ -0.45
CTCFL-216ENST00000608263 ATP5J2-PTCD1G3V325 749 aa12.26□□□□□ -0.45
CTCFL-216ENST00000608263 SMC2O95347 1197 aa12.26□□□□□ -0.45
CTCFL-216ENST00000608263 GCP02774 474 aa12.26□□□□□ -0.45
CTCFL-216ENST00000608263 CDK11BP21127 795 aaKnown RBP12.26□□□□□ -0.45
CTCFL-216ENST00000608263 TBX22Q9Y458 520 aa12.26□□□□□ -0.45
CTCFL-216ENST00000608263 FKBP4Q02790 459 aaKnown RBP eCLIP12.26□□□□□ -0.45
CTCFL-216ENST00000608263 MYD88Q99836 296 aa12.26□□□□□ -0.45
CTCFL-216ENST00000608263 KLHDC4Q8TBB5 520 aa12.26□□□□□ -0.45
CTCFL-216ENST00000608263 CHMP4CQ96CF2 233 aa12.26□□□□□ -0.45
CTCFL-216ENST00000608263 IGSF3O75054 1194 aa12.25□□□□□ -0.45
CTCFL-216ENST00000608263 ZNF445P59923 1031 aa12.25□□□□□ -0.45
CTCFL-216ENST00000608263 UBE2HP62256 183 aa12.25□□□□□ -0.45
CTCFL-216ENST00000608263 CNNM1Q9NRU3 951 aa12.25□□□□□ -0.45
CTCFL-216ENST00000608263 ZNF219Q9P2Y4 722 aaPredicted RBP12.25□□□□□ -0.45
CTCFL-216ENST00000608263 ZFYVE9O95405 1425 aa12.25□□□□□ -0.45
CTCFL-216ENST00000608263 NOLC1Q14978 699 aaKnown RBP eCLIP12.25□□□□□ -0.45
CTCFL-216ENST00000608263 SYNE3Q6ZMZ3 975 aa12.25□□□□□ -0.45
CTCFL-216ENST00000608263 ZSCAN31Q96LW9 406 aaPredicted RBP12.25□□□□□ -0.45
CTCFL-216ENST00000608263 TRMT1Q9NXH9 659 aaKnown RBP12.25□□□□□ -0.45
CTCFL-216ENST00000608263 RBM8AQ9Y5S9 174 aaKnown RBP12.25□□□□□ -0.45
CTCFL-216ENST00000608263 FAM177A1Q8N128 213 aaPredicted RBP12.25□□□□□ -0.45
CTCFL-216ENST00000608263 NDUFB9Q9Y6M9 179 aa12.25□□□□□ -0.45
CTCFL-216ENST00000608263 MADDQ8WXG6 1647 aa12.24□□□□□ -0.45
CTCFL-216ENST00000608263 F13A1P00488 732 aa12.24□□□□□ -0.45
CTCFL-216ENST00000608263 LGR6Q9HBX8 967 aa12.24□□□□□ -0.45
CTCFL-216ENST00000608263 RALYLQ86SE5 291 aaKnown RBP12.24□□□□□ -0.45
CTCFL-216ENST00000608263 NOL7Q9UMY1 257 aaKnown RBP12.24□□□□□ -0.45
CTCFL-216ENST00000608263 STK38Q15208 465 aa12.23□□□□□ -0.45
CTCFL-216ENST00000608263 DACT1Q9NYF0 836 aa12.23□□□□□ -0.45
CTCFL-216ENST00000608263 DBF4Q9UBU7 674 aaPredicted RBP12.23□□□□□ -0.45
CTCFL-216ENST00000608263 CLSTN1O94985 981 aa12.23□□□□□ -0.45
CTCFL-216ENST00000608263 NFXL1Q6ZNB6 911 aa12.23□□□□□ -0.45
CTCFL-216ENST00000608263 DDX46Q7L014 1031 aaKnown RBP12.23□□□□□ -0.45
CTCFL-216ENST00000608263 HIP1O00291 1037 aa12.23□□□□□ -0.45
CTCFL-216ENST00000608263 NCBP3Q53F19 620 aaKnown RBP12.23□□□□□ -0.45
CTCFL-216ENST00000608263 ISM2Q6H9L7 571 aa12.23□□□□□ -0.45
CTCFL-216ENST00000608263 PDCL2Q8N4E4 241 aa12.23□□□□□ -0.45
CTCFL-216ENST00000608263 ZCCHC11Q5TAX3 1644 aaKnown RBP12.23□□□□□ -0.45
CTCFL-216ENST00000608263 PES1O00541 588 aaKnown RBP12.22□□□□□ -0.45
CTCFL-216ENST00000608263 UNC13BO14795 1591 aa12.22□□□□□ -0.45
CTCFL-216ENST00000608263 ANAPC15P60006 121 aa12.22□□□□□ -0.45
CTCFL-216ENST00000608263 SOS1Q07889 1333 aaPredicted RBP12.22□□□□□ -0.45
CTCFL-216ENST00000608263 PIK3R4Q99570 1358 aa12.22□□□□□ -0.45
CTCFL-216ENST00000608263 KCNQ3O43525 872 aa12.22□□□□□ -0.45
CTCFL-216ENST00000608263 CCDC186Q7Z3E2 898 aa12.22□□□□□ -0.45
CTCFL-216ENST00000608263 MTERF4Q7Z6M4 381 aaKnown RBP12.22□□□□□ -0.45
CTCFL-216ENST00000608263 CCDC112Q8NEF3 446 aa12.22□□□□□ -0.45
CTCFL-216ENST00000608263 SNRKQ9NRH2 765 aa12.22□□□□□ -0.45
CTCFL-216ENST00000608263 SNX14Q9Y5W7 946 aa12.22□□□□□ -0.45
CTCFL-216ENST00000608263 ZNF853P0CG23 659 aa12.22□□□□□ -0.45
CTCFL-216ENST00000608263 TRDNQ13061 729 aa12.22□□□□□ -0.45
CTCFL-216ENST00000608263 PDILTQ8N807 584 aa12.22□□□□□ -0.45
CTCFL-216ENST00000608263 USP44Q9H0E7 712 aa12.22□□□□□ -0.45
CTCFL-216ENST00000608263 BTG4Q9NY30 223 aa12.22□□□□□ -0.45
CTCFL-216ENST00000608263 MYOM2P54296 1465 aa12.22□□□□□ -0.45
CTCFL-216ENST00000608263 BIN1O00499 593 aa12.21□□□□□ -0.45
CTCFL-216ENST00000608263 BRD1O95696 1058 aa12.21□□□□□ -0.45
CTCFL-216ENST00000608263 ZNF165P49910 485 aa12.21□□□□□ -0.45
CTCFL-216ENST00000608263 ANKRD1Q15327 319 aa12.21□□□□□ -0.45
CTCFL-216ENST00000608263 UBE3BQ7Z3V4 1068 aa12.21□□□□□ -0.45
CTCFL-216ENST00000608263 LUZP1Q86V48 1076 aa12.21□□□□□ -0.45
CTCFL-216ENST00000608263 STARD3NLO95772 234 aa12.21□□□□□ -0.45
CTCFL-216ENST00000608263 NMIQ13287 307 aaPredicted RBP12.21□□□□□ -0.45
CTCFL-216ENST00000608263 VPS53Q5VIR6 699 aa12.21□□□□□ -0.45
CTCFL-216ENST00000608263 CHST3Q7LGC8 479 aa12.21□□□□□ -0.45
CTCFL-216ENST00000608263 EDC3Q96F86 508 aaKnown RBP12.21□□□□□ -0.45
CTCFL-216ENST00000608263 FAM227BQ96M60 508 aa12.21□□□□□ -0.45
CTCFL-216ENST00000608263 MPHOSPH8Q99549 860 aa12.21□□□□□ -0.45
CTCFL-216ENST00000608263 PPP4R3BQ5MIZ7 849 aa12.21□□□□□ -0.46
CTCFL-216ENST00000608263 BRF1Q92994 677 aa12.21□□□□□ -0.46
CTCFL-216ENST00000608263 SH2B1Q9NRF2 756 aaPredicted RBP12.21□□□□□ -0.46
CTCFL-216ENST00000608263 E9PCH4 1651 aa12.21□□□□□ -0.46
CTCFL-216ENST00000608263 ZFYVE16Q7Z3T8 1539 aa12.21□□□□□ -0.46
CTCFL-216ENST00000608263 HAND2P61296 217 aa12.21□□□□□ -0.46
CTCFL-216ENST00000608263 RASEFQ8IZ41 740 aa12.21□□□□□ -0.46
CTCFL-216ENST00000608263 EVI5LQ96CN4 794 aa12.21□□□□□ -0.46
CTCFL-216ENST00000608263 PPP1R9BQ96SB3 815 aa12.21□□□□□ -0.46
CTCFL-216ENST00000608263 ANO6Q4KMQ2 910 aa12.2□□□□□ -0.46
CTCFL-216ENST00000608263 DNAJC25Q9H1X3 360 aa12.2□□□□□ -0.46
CTCFL-216ENST00000608263 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.2□□□□□ -0.46
CTCFL-216ENST00000608263 V9GYY5 206 aaPredicted RBP12.2□□□□□ -0.46
CTCFL-216ENST00000608263 RRP12Q5JTH9 1297 aaKnown RBP12.2□□□□□ -0.46
CTCFL-216ENST00000608263 IFNL2Q8IZJ0 200 aa12.2□□□□□ -0.46
CTCFL-216ENST00000608263 SLAIN2Q9P270 581 aa12.2□□□□□ -0.46
CTCFL-216ENST00000608263 CLIP2Q9UDT6 1046 aa12.2□□□□□ -0.46
CTCFL-216ENST00000608263 MAP3K4Q9Y6R4 1608 aa12.2□□□□□ -0.46
CTCFL-216ENST00000608263 DHX16O60231 1041 aaKnown RBP12.2□□□□□ -0.46
CTCFL-216ENST00000608263 TNNT1P13805 278 aa12.2□□□□□ -0.46
CTCFL-216ENST00000608263 PTGS1P23219 599 aa12.2□□□□□ -0.46
CTCFL-216ENST00000608263 CCDC57Q2TAC2 916 aa12.2□□□□□ -0.46
CTCFL-216ENST00000608263 AMOTQ4VCS5 1084 aa12.2□□□□□ -0.46
CTCFL-216ENST00000608263 IL17REQ8NFR9 667 aa12.2□□□□□ -0.46
CTCFL-216ENST00000608263 EDC4Q6P2E9 1401 aaKnown RBP12.19□□□□□ -0.46
CTCFL-216ENST00000608263 INTS4Q96HW7 963 aaKnown RBP12.19□□□□□ -0.46
CTCFL-216ENST00000608263 NOL10Q9BSC4 688 aaKnown RBP12.19□□□□□ -0.46
CTCFL-216ENST00000608263 A0A087WZG4 1122 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms