RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 ZBED9Q6R2W3 1325 aa18.33■□□□□ 0.53
CTSA-219ENST00000607841 MAP3K15Q6ZN16 1313 aa18.33■□□□□ 0.53
CTSA-219ENST00000607841 COPS6Q7L5N1 327 aa18.33■□□□□ 0.52
CTSA-219ENST00000607841 TRMT2AQ8IZ69 625 aaKnown RBP18.33■□□□□ 0.52
CTSA-219ENST00000607841 LRP5O75197 1615 aa18.33■□□□□ 0.52
CTSA-219ENST00000607841 TM4SF1P30408 202 aa18.32■□□□□ 0.52
CTSA-219ENST00000607841 AIMP1Q12904 312 aaKnown RBP18.32■□□□□ 0.52
CTSA-219ENST00000607841 TTLL7Q6ZT98 887 aa18.32■□□□□ 0.52
CTSA-219ENST00000607841 XAGE3Q8WTP9 111 aa18.32■□□□□ 0.52
CTSA-219ENST00000607841 NFIXQ14938 502 aa18.31■□□□□ 0.52
CTSA-219ENST00000607841 SETDB2Q96T68 719 aa18.31■□□□□ 0.52
CTSA-219ENST00000607841 C4AP0C0L4 1744 aa18.3■□□□□ 0.52
CTSA-219ENST00000607841 SLC4A2P04920 1241 aa18.3■□□□□ 0.52
CTSA-219ENST00000607841 ZNF428Q96B54 188 aa18.3■□□□□ 0.52
CTSA-219ENST00000607841 ZBTB3Q9H5J0 574 aa18.3■□□□□ 0.52
CTSA-219ENST00000607841 DDX58O95786 925 aaKnown RBP18.29■□□□□ 0.52
CTSA-219ENST00000607841 CT47B1P0C2W7 299 aaPredicted RBP18.29■□□□□ 0.52
CTSA-219ENST00000607841 TBC1D9BQ66K14 1250 aa18.29■□□□□ 0.52
CTSA-219ENST00000607841 BICDL1Q6ZP65 573 aa18.29■□□□□ 0.52
CTSA-219ENST00000607841 ANKRD13DQ6ZTN6 518 aa18.29■□□□□ 0.52
CTSA-219ENST00000607841 POLRMTO00411 1230 aaKnown RBP18.28■□□□□ 0.52
CTSA-219ENST00000607841 TCERG1O14776 1098 aaKnown RBP18.28■□□□□ 0.52
CTSA-219ENST00000607841 HLFQ16534 295 aa18.28■□□□□ 0.52
CTSA-219ENST00000607841 HSP90AB3PQ58FF7 597 aa18.28■□□□□ 0.52
CTSA-219ENST00000607841 GIGYF2Q6Y7W6 1299 aaKnown RBP18.28■□□□□ 0.52
CTSA-219ENST00000607841 PLBD2Q8NHP8 589 aa18.28■□□□□ 0.52
CTSA-219ENST00000607841 DDR1Q08345 913 aa18.27■□□□□ 0.52
CTSA-219ENST00000607841 KLHL34Q8N239 644 aa18.27■□□□□ 0.52
CTSA-219ENST00000607841 PHAXQ9H814 394 aaKnown RBP18.27■□□□□ 0.52
CTSA-219ENST00000607841 NIP7Q9Y221 180 aaKnown RBP eCLIP18.27■□□□□ 0.52
CTSA-219ENST00000607841 CD2APQ9Y5K6 639 aa18.27■□□□□ 0.52
CTSA-219ENST00000607841 CARMIL3Q8ND23 1372 aa18.27■□□□□ 0.51
CTSA-219ENST00000607841 COL24A1Q17RW2 1714 aa18.26■□□□□ 0.51
CTSA-219ENST00000607841 SERPINB2P05120 415 aa18.26■□□□□ 0.51
CTSA-219ENST00000607841 RIC3Q7Z5B4 369 aa18.26■□□□□ 0.51
CTSA-219ENST00000607841 FHDC1Q9C0D6 1143 aaPredicted RBP18.26■□□□□ 0.51
CTSA-219ENST00000607841 NPHP1O15259 732 aa18.25■□□□□ 0.51
CTSA-219ENST00000607841 SCN7AQ01118 1682 aa18.25■□□□□ 0.51
CTSA-219ENST00000607841 SYT17Q9BSW7 474 aa18.24■□□□□ 0.51
CTSA-219ENST00000607841 ATP10DQ9P241 1426 aa18.23■□□□□ 0.51
CTSA-219ENST00000607841 FLIIQ13045 1269 aa18.23■□□□□ 0.51
CTSA-219ENST00000607841 TCIRG1Q13488 830 aa18.23■□□□□ 0.51
CTSA-219ENST00000607841 ALDH1L2Q3SY69 923 aa18.23■□□□□ 0.51
CTSA-219ENST00000607841 PARP10Q53GL7 1025 aa18.23■□□□□ 0.51
CTSA-219ENST00000607841 TPTE2Q6XPS3 522 aa18.23■□□□□ 0.51
CTSA-219ENST00000607841 NBPF5PQ86XG9 351 aaPredicted RBP18.23■□□□□ 0.51
CTSA-219ENST00000607841 ZNF34Q8IZ26 560 aa18.23■□□□□ 0.51
CTSA-219ENST00000607841 NYXQ9GZU5 481 aa18.23■□□□□ 0.51
CTSA-219ENST00000607841 KSR2Q6VAB6 950 aa18.22■□□□□ 0.51
CTSA-219ENST00000607841 CNBD1Q8NA66 436 aa18.22■□□□□ 0.51
CTSA-219ENST00000607841 GPTP24298 496 aa18.21■□□□□ 0.51
CTSA-219ENST00000607841 GTF2E1P29083 439 aaPredicted RBP18.21■□□□□ 0.51
CTSA-219ENST00000607841 ST5P78524 1137 aa18.21■□□□□ 0.51
CTSA-219ENST00000607841 FKBP5Q13451 457 aaPredicted RBP18.21■□□□□ 0.51
CTSA-219ENST00000607841 G2E3Q7L622 706 aa18.21■□□□□ 0.51
CTSA-219ENST00000607841 PPP1R42Q7Z4L9 355 aa18.21■□□□□ 0.51
CTSA-219ENST00000607841 BCORQ6W2J9 1755 aa18.21■□□□□ 0.51
CTSA-219ENST00000607841 PI4KAP2A4QPH2 592 aa18.2■□□□□ 0.5
CTSA-219ENST00000607841 TGFB2P61812 414 aa18.2■□□□□ 0.5
CTSA-219ENST00000607841 PI4KAP1Q8N8J0 262 aa18.2■□□□□ 0.5
CTSA-219ENST00000607841 FAM177BA6PVY3 158 aa18.19■□□□□ 0.5
CTSA-219ENST00000607841 NEXNQ0ZGT2 675 aa18.19■□□□□ 0.5
CTSA-219ENST00000607841 PRR5LQ6MZQ0 368 aa18.19■□□□□ 0.5
CTSA-219ENST00000607841 C10orf71Q711Q0 1435 aa18.19■□□□□ 0.5
CTSA-219ENST00000607841 MRPL50Q8N5N7 158 aaKnown RBP18.19■□□□□ 0.5
CTSA-219ENST00000607841 SSH1Q8WYL5 1049 aa18.19■□□□□ 0.5
CTSA-219ENST00000607841 METTL22Q9BUU2 404 aaPredicted RBP18.19■□□□□ 0.5
CTSA-219ENST00000607841 MAP3K2Q9Y2U5 619 aa18.19■□□□□ 0.5
CTSA-219ENST00000607841 TRIM28Q13263 835 aaKnown RBP18.18■□□□□ 0.5
CTSA-219ENST00000607841 SUSD4Q5VX71 490 aa18.18■□□□□ 0.5
CTSA-219ENST00000607841 NLRP10Q86W26 655 aa18.18■□□□□ 0.5
CTSA-219ENST00000607841 ISCA1Q9BUE6 129 aa18.18■□□□□ 0.5
CTSA-219ENST00000607841 UTP14AQ9BVJ6 771 aaKnown RBP18.18■□□□□ 0.5
CTSA-219ENST00000607841 BRIP1Q9BX63 1249 aa18.18■□□□□ 0.5
CTSA-219ENST00000607841 SMC4Q9NTJ3 1288 aa18.18■□□□□ 0.5
CTSA-219ENST00000607841 PDZRN3Q9UPQ7 1066 aa18.18■□□□□ 0.5
CTSA-219ENST00000607841 UBN2Q6ZU65 1347 aa18.18■□□□□ 0.5
CTSA-219ENST00000607841 IBTKQ9P2D0 1353 aaPredicted RBP18.17■□□□□ 0.5
CTSA-219ENST00000607841 PDE6BP35913 854 aa18.17■□□□□ 0.5
CTSA-219ENST00000607841 MYD88Q99836 296 aa18.17■□□□□ 0.5
CTSA-219ENST00000607841 RNF123Q5XPI4 1314 aa18.17■□□□□ 0.5
CTSA-219ENST00000607841 ATP5J2-PTCD1G3V325 749 aa18.16■□□□□ 0.5
CTSA-219ENST00000607841 DNAAF4Q8WXU2 420 aa18.16■□□□□ 0.5
CTSA-219ENST00000607841 YTHDC1Q96MU7 727 aaKnown RBP18.16■□□□□ 0.5
CTSA-219ENST00000607841 BCL2L13Q9BXK5 485 aa18.16■□□□□ 0.5
CTSA-219ENST00000607841 PTPRCP08575 1304 aa18.16■□□□□ 0.5
CTSA-219ENST00000607841 ADCY9O60503 1353 aa18.16■□□□□ 0.5
CTSA-219ENST00000607841 DCAF8L1A6NGE4 600 aa18.15■□□□□ 0.5
CTSA-219ENST00000607841 RARSP54136 660 aaKnown RBP18.15■□□□□ 0.5
CTSA-219ENST00000607841 CCDC191Q8NCU4 936 aa18.15■□□□□ 0.5
CTSA-219ENST00000607841 NLGN2Q8NFZ4 835 aa18.15■□□□□ 0.5
CTSA-219ENST00000607841 TRMT112Q9UI30 125 aaKnown RBP18.15■□□□□ 0.5
CTSA-219ENST00000607841 NTSR2O95665 410 aa18.14■□□□□ 0.49
CTSA-219ENST00000607841 BRPF1P55201 1214 aaPredicted RBP18.14■□□□□ 0.49
CTSA-219ENST00000607841 CWC25Q9NXE8 425 aaPredicted RBP18.14■□□□□ 0.49
CTSA-219ENST00000607841 H0YIN7 160 aa18.13■□□□□ 0.49
CTSA-219ENST00000607841 ERFEQ4G0M1 354 aa18.13■□□□□ 0.49
CTSA-219ENST00000607841 NUTM1Q86Y26 1132 aa18.13■□□□□ 0.49
CTSA-219ENST00000607841 CCDC24Q8N4L8 307 aa18.13■□□□□ 0.49
CTSA-219ENST00000607841 SH3TC1Q8TE82 1336 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms