RNA–Protein interactions for RNA: ENST00000607320.5

RFTN1-212, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 3

Gene RFTN1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-212ENST00000607320 C9orf131Q5VYM1 1079 aa14.18□□□□□ -0.14
RFTN1-212ENST00000607320 PDZRN3Q9UPQ7 1066 aa14.18□□□□□ -0.14
RFTN1-212ENST00000607320 TBC1D2BQ9UPU7 963 aa14.18□□□□□ -0.14
RFTN1-212ENST00000607320 CCDC88AQ3V6T2 1871 aa14.17□□□□□ -0.14
RFTN1-212ENST00000607320 ANKRD31Q8N7Z5 1873 aa14.17□□□□□ -0.14
RFTN1-212ENST00000607320 H0YIN7 160 aa14.17□□□□□ -0.14
RFTN1-212ENST00000607320 KIF3CO14782 793 aa14.17□□□□□ -0.14
RFTN1-212ENST00000607320 KCNQ3O43525 872 aa14.17□□□□□ -0.14
RFTN1-212ENST00000607320 A1BGP04217 495 aa14.17□□□□□ -0.14
RFTN1-212ENST00000607320 SNRPA1P09661 255 aaKnown RBP14.17□□□□□ -0.14
RFTN1-212ENST00000607320 TBC1D9BQ66K14 1250 aa14.17□□□□□ -0.14
RFTN1-212ENST00000607320 PNNQ9H307 717 aaKnown RBP14.17□□□□□ -0.14
RFTN1-212ENST00000607320 CARMIL3Q8ND23 1372 aa14.17□□□□□ -0.14
RFTN1-212ENST00000607320 C2CD5Q86YS7 1000 aa14.16□□□□□ -0.14
RFTN1-212ENST00000607320 TTLL6Q8N841 843 aa14.16□□□□□ -0.14
RFTN1-212ENST00000607320 USP16Q9Y5T5 823 aa14.16□□□□□ -0.14
RFTN1-212ENST00000607320 LAMB4A4D0S4 1761 aa14.15□□□□□ -0.14
RFTN1-212ENST00000607320 NPHP1O15259 732 aa14.15□□□□□ -0.14
RFTN1-212ENST00000607320 HSPA6P17066 643 aa14.15□□□□□ -0.14
RFTN1-212ENST00000607320 PDE6BP35913 854 aa14.15□□□□□ -0.14
RFTN1-212ENST00000607320 DCTN1Q14203 1278 aa14.15□□□□□ -0.14
RFTN1-212ENST00000607320 TAF7Q15545 349 aaPredicted RBP14.15□□□□□ -0.14
RFTN1-212ENST00000607320 DZIP3Q86Y13 1208 aaKnown RBP14.15□□□□□ -0.14
RFTN1-212ENST00000607320 SETDB2Q96T68 719 aa14.15□□□□□ -0.14
RFTN1-212ENST00000607320 RNF181Q9P0P0 153 aa14.15□□□□□ -0.14
RFTN1-212ENST00000607320 CAMTA2O94983 1202 aa14.14□□□□□ -0.15
RFTN1-212ENST00000607320 PNISRQ8TF01 805 aaKnown RBP14.14□□□□□ -0.15
RFTN1-212ENST00000607320 BRIP1Q9BX63 1249 aa14.14□□□□□ -0.15
RFTN1-212ENST00000607320 ZNF652Q9Y2D9 606 aa14.14□□□□□ -0.15
RFTN1-212ENST00000607320 KDM2BQ8NHM5 1336 aa14.14□□□□□ -0.15
RFTN1-212ENST00000607320 CACNA1SQ13698 1873 aa14.13□□□□□ -0.15
RFTN1-212ENST00000607320 TOMM70O94826 608 aa14.13□□□□□ -0.15
RFTN1-212ENST00000607320 GSE1Q14687 1217 aa14.13□□□□□ -0.15
RFTN1-212ENST00000607320 PRR5LQ6MZQ0 368 aa14.13□□□□□ -0.15
RFTN1-212ENST00000607320 CLEC4GQ6UXB4 293 aa14.13□□□□□ -0.15
RFTN1-212ENST00000607320 CNBD1Q8NA66 436 aa14.13□□□□□ -0.15
RFTN1-212ENST00000607320 KDM3BQ7LBC6 1761 aa14.13□□□□□ -0.15
RFTN1-212ENST00000607320 CEP350Q5VT06 3117 aa14.13□□□□□ -0.15
RFTN1-212ENST00000607320 TNRC6CQ9HCJ0 1690 aaKnown RBP14.13□□□□□ -0.15
RFTN1-212ENST00000607320 MAPK8IP3Q9UPT6 1336 aa14.13□□□□□ -0.15
RFTN1-212ENST00000607320 ZC3H4Q9UPT8 1303 aaKnown RBP14.13□□□□□ -0.15
RFTN1-212ENST00000607320 PRAMEF22A3QJZ6 481 aa14.12□□□□□ -0.15
RFTN1-212ENST00000607320 ST5P78524 1137 aa14.12□□□□□ -0.15
RFTN1-212ENST00000607320 C16orf71Q8IYS4 520 aaPredicted RBP14.12□□□□□ -0.15
RFTN1-212ENST00000607320 ZNF622Q969S3 477 aaKnown RBP eCLIP14.12□□□□□ -0.15
RFTN1-212ENST00000607320 COL11A2P13942 1736 aaPredicted RBP14.12□□□□□ -0.15
RFTN1-212ENST00000607320 LMNB1P20700 586 aa14.11□□□□□ -0.15
RFTN1-212ENST00000607320 PIP4K2AP48426 406 aaPredicted RBP14.11□□□□□ -0.15
RFTN1-212ENST00000607320 RASSF7Q02833 373 aa14.11□□□□□ -0.15
RFTN1-212ENST00000607320 RALBP1Q15311 655 aa14.11□□□□□ -0.15
RFTN1-212ENST00000607320 NFE2L2Q16236 605 aa14.11□□□□□ -0.15
RFTN1-212ENST00000607320 FER1L6Q2WGJ9 1857 aa14.11□□□□□ -0.15
RFTN1-212ENST00000607320 PLEKHF1Q96S99 279 aa14.11□□□□□ -0.15
RFTN1-212ENST00000607320 NMRK2Q9NPI5 230 aa14.11□□□□□ -0.15
RFTN1-212ENST00000607320 DICER1Q9UPY3 1922 aaKnown RBP14.11□□□□□ -0.15
RFTN1-212ENST00000607320 ARFGEF2Q9Y6D5 1785 aa14.11□□□□□ -0.15
RFTN1-212ENST00000607320 TIAM2Q8IVF5 1701 aa14.1□□□□□ -0.15
RFTN1-212ENST00000607320 NBPF5PQ86XG9 351 aaPredicted RBP14.09□□□□□ -0.15
RFTN1-212ENST00000607320 CNKSR1Q969H4 720 aa14.09□□□□□ -0.15
RFTN1-212ENST00000607320 MIS18AQ9NYP9 233 aa14.09□□□□□ -0.15
RFTN1-212ENST00000607320 NUP98P52948 1817 aa14.08□□□□□ -0.15
RFTN1-212ENST00000607320 SLX4Q8IY92 1834 aa14.08□□□□□ -0.15
RFTN1-212ENST00000607320 NBPF26B4DH59 902 aa14.08□□□□□ -0.16
RFTN1-212ENST00000607320 STYK1Q6J9G0 422 aa14.08□□□□□ -0.16
RFTN1-212ENST00000607320 NBPF10Q6P3W6 841 aaKnown RBP14.08□□□□□ -0.16
RFTN1-212ENST00000607320 CCDC24Q8N4L8 307 aa14.08□□□□□ -0.16
RFTN1-212ENST00000607320 NBPF15Q8N660 670 aa14.08□□□□□ -0.16
RFTN1-212ENST00000607320 RBM46Q8TBY0 533 aaKnown RBP14.08□□□□□ -0.16
RFTN1-212ENST00000607320 APLP1P51693 650 aa14.07□□□□□ -0.16
RFTN1-212ENST00000607320 SOGA3Q5TF21 947 aa14.07□□□□□ -0.16
RFTN1-212ENST00000607320 TPTE2Q6XPS3 522 aa14.07□□□□□ -0.16
RFTN1-212ENST00000607320 MASTLQ96GX5 879 aa14.07□□□□□ -0.16
RFTN1-212ENST00000607320 NIP7Q9Y221 180 aaKnown RBP eCLIP14.07□□□□□ -0.16
RFTN1-212ENST00000607320 NFKBIEO00221 500 aa14.06□□□□□ -0.16
RFTN1-212ENST00000607320 C21orf2O43822 256 aa14.06□□□□□ -0.16
RFTN1-212ENST00000607320 SRGNP10124 158 aa14.06□□□□□ -0.16
RFTN1-212ENST00000607320 EIF4A1P60842 406 aaKnown RBP14.06□□□□□ -0.16
RFTN1-212ENST00000607320 NBR1Q14596 966 aa14.06□□□□□ -0.16
RFTN1-212ENST00000607320 RRAGCQ9HB90 399 aa14.06□□□□□ -0.16
RFTN1-212ENST00000607320 GLTPD2A6NH11 291 aa14.05□□□□□ -0.16
RFTN1-212ENST00000607320 LMOD3Q0VAK6 560 aa14.05□□□□□ -0.16
RFTN1-212ENST00000607320 FSTL1Q12841 308 aa14.05□□□□□ -0.16
RFTN1-212ENST00000607320 POTEDQ86YR6 584 aa14.05□□□□□ -0.16
RFTN1-212ENST00000607320 RNF25Q96BH1 459 aaPredicted RBP14.05□□□□□ -0.16
RFTN1-212ENST00000607320 THUMPD2Q9BTF0 503 aaKnown RBP14.05□□□□□ -0.16
RFTN1-212ENST00000607320 LTBP3Q9NS15 1303 aa14.05□□□□□ -0.16
RFTN1-212ENST00000607320 ERVV-1B6SEH8 477 aa14.04□□□□□ -0.16
RFTN1-212ENST00000607320 NPR1P16066 1061 aa14.04□□□□□ -0.16
RFTN1-212ENST00000607320 GTF2E1P29083 439 aaPredicted RBP14.04□□□□□ -0.16
RFTN1-212ENST00000607320 PRELPP51888 382 aa14.04□□□□□ -0.16
RFTN1-212ENST00000607320 RIPK4P57078 832 aa14.04□□□□□ -0.16
RFTN1-212ENST00000607320 DDX10Q13206 875 aaKnown RBP14.04□□□□□ -0.16
RFTN1-212ENST00000607320 DPY19L2Q6NUT2 758 aa14.04□□□□□ -0.16
RFTN1-212ENST00000607320 PRPF40BQ6NWY9 871 aaKnown RBP14.04□□□□□ -0.16
RFTN1-212ENST00000607320 KIF6Q6ZMV9 814 aa14.04□□□□□ -0.16
RFTN1-212ENST00000607320 TAOK3Q9H2K8 898 aa14.04□□□□□ -0.16
RFTN1-212ENST00000607320 TSPYL4Q9UJ04 414 aa14.04□□□□□ -0.16
RFTN1-212ENST00000607320 MYBBP1AQ9BQG0 1328 aaKnown RBP14.04□□□□□ -0.16
RFTN1-212ENST00000607320 WDR90Q96KV7 1748 aa14.04□□□□□ -0.16
RFTN1-212ENST00000607320 VEGFAP15692 232 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms