RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 PPP2R1AP30153 589 aa19.79■□□□□ 0.76
CTSA-216ENST00000607212 PRELPP51888 382 aa19.79■□□□□ 0.76
CTSA-216ENST00000607212 ERFEQ4G0M1 354 aa19.79■□□□□ 0.76
CTSA-216ENST00000607212 NBPF5PQ86XG9 351 aaPredicted RBP19.79■□□□□ 0.76
CTSA-216ENST00000607212 CNKSR1Q969H4 720 aa19.79■□□□□ 0.76
CTSA-216ENST00000607212 KLRG1Q96E93 195 aa19.79■□□□□ 0.76
CTSA-216ENST00000607212 PRAMEF22A3QJZ6 481 aa19.78■□□□□ 0.76
CTSA-216ENST00000607212 SNRPA1P09661 255 aaKnown RBP19.78■□□□□ 0.76
CTSA-216ENST00000607212 DCTN1Q14203 1278 aa19.78■□□□□ 0.76
CTSA-216ENST00000607212 FAM177BA6PVY3 158 aa19.77■□□□□ 0.76
CTSA-216ENST00000607212 TAOK3Q9H2K8 898 aa19.77■□□□□ 0.76
CTSA-216ENST00000607212 DICER1Q9UPY3 1922 aaKnown RBP19.76■□□□□ 0.75
CTSA-216ENST00000607212 FER1L6Q2WGJ9 1857 aa19.76■□□□□ 0.75
CTSA-216ENST00000607212 MASTLQ96GX5 879 aa19.76■□□□□ 0.75
CTSA-216ENST00000607212 SLX4Q8IY92 1834 aa19.75■□□□□ 0.75
CTSA-216ENST00000607212 SOGA3Q5TF21 947 aa19.75■□□□□ 0.75
CTSA-216ENST00000607212 STYK1Q6J9G0 422 aa19.75■□□□□ 0.75
CTSA-216ENST00000607212 PRPF40BQ6NWY9 871 aaKnown RBP19.75■□□□□ 0.75
CTSA-216ENST00000607212 GTF2E1P29083 439 aaPredicted RBP19.74■□□□□ 0.75
CTSA-216ENST00000607212 NIP7Q9Y221 180 aaKnown RBP eCLIP19.74■□□□□ 0.75
CTSA-216ENST00000607212 SRGNP10124 158 aa19.73■□□□□ 0.75
CTSA-216ENST00000607212 NGEFQ8N5V2 710 aa19.73■□□□□ 0.75
CTSA-216ENST00000607212 TAF7Q15545 349 aaPredicted RBP19.72■□□□□ 0.75
CTSA-216ENST00000607212 CLEC4GQ6UXB4 293 aa19.72■□□□□ 0.75
CTSA-216ENST00000607212 MIS18AQ9NYP9 233 aa19.72■□□□□ 0.75
CTSA-216ENST00000607212 ARFGEF2Q9Y6D5 1785 aa19.72■□□□□ 0.75
CTSA-216ENST00000607212 HTATSF1O43719 755 aaKnown RBP19.71■□□□□ 0.75
CTSA-216ENST00000607212 TPTE2Q6XPS3 522 aa19.71■□□□□ 0.75
CTSA-216ENST00000607212 CCDC93Q567U6 631 aa19.7■□□□□ 0.74
CTSA-216ENST00000607212 DLG5Q8TDM6 1919 aa19.69■□□□□ 0.74
CTSA-216ENST00000607212 NPR1P16066 1061 aa19.69■□□□□ 0.74
CTSA-216ENST00000607212 LAMB4A4D0S4 1761 aa19.69■□□□□ 0.74
CTSA-216ENST00000607212 LTBP3Q9NS15 1303 aa19.69■□□□□ 0.74
CTSA-216ENST00000607212 NBPF26B4DH59 902 aa19.68■□□□□ 0.74
CTSA-216ENST00000607212 DDNO94850 711 aaPredicted RBP19.68■□□□□ 0.74
CTSA-216ENST00000607212 NBPF10Q6P3W6 841 aaKnown RBP19.68■□□□□ 0.74
CTSA-216ENST00000607212 NBPF15Q8N660 670 aa19.68■□□□□ 0.74
CTSA-216ENST00000607212 JMYQ8N9B5 988 aa19.68■□□□□ 0.74
CTSA-216ENST00000607212 PNISRQ8TF01 805 aaKnown RBP19.67■□□□□ 0.74
CTSA-216ENST00000607212 MAPK8IP3Q9UPT6 1336 aa19.67■□□□□ 0.74
CTSA-216ENST00000607212 POTECB2RU33 542 aa19.66■□□□□ 0.74
CTSA-216ENST00000607212 KIF6Q6ZMV9 814 aa19.66■□□□□ 0.74
CTSA-216ENST00000607212 RRP7AQ9Y3A4 280 aaKnown RBP19.66■□□□□ 0.74
CTSA-216ENST00000607212 HLFQ16534 295 aa19.65■□□□□ 0.74
CTSA-216ENST00000607212 CHADLQ6NUI6 762 aa19.65■□□□□ 0.74
CTSA-216ENST00000607212 ZNF277Q9NRM2 450 aaPredicted RBP19.65■□□□□ 0.74
CTSA-216ENST00000607212 IQCA1LA6NCM1 817 aa19.64■□□□□ 0.73
CTSA-216ENST00000607212 MYL6BP14649 208 aa19.64■□□□□ 0.73
CTSA-216ENST00000607212 NYXQ9GZU5 481 aa19.64■□□□□ 0.73
CTSA-216ENST00000607212 ALDH1B1P30837 517 aa19.63■□□□□ 0.73
CTSA-216ENST00000607212 FKBP4Q02790 459 aaKnown RBP eCLIP19.63■□□□□ 0.73
CTSA-216ENST00000607212 EAPPQ56P03 285 aaPredicted RBP19.63■□□□□ 0.73
CTSA-216ENST00000607212 THUMPD2Q9BTF0 503 aaKnown RBP19.63■□□□□ 0.73
CTSA-216ENST00000607212 PNNQ9H307 717 aaKnown RBP19.63■□□□□ 0.73
CTSA-216ENST00000607212 CLEC11AQ9Y240 323 aa19.63■□□□□ 0.73
CTSA-216ENST00000607212 NUP98P52948 1817 aa19.62■□□□□ 0.73
CTSA-216ENST00000607212 KDM3BQ7LBC6 1761 aa19.62■□□□□ 0.73
CTSA-216ENST00000607212 CAPN15O75808 1086 aa19.62■□□□□ 0.73
CTSA-216ENST00000607212 NFE2L2Q16236 605 aa19.62■□□□□ 0.73
CTSA-216ENST00000607212 COL13A1Q5TAT6 717 aaPredicted RBP19.62■□□□□ 0.73
CTSA-216ENST00000607212 OLFM4Q6UX06 510 aa19.62■□□□□ 0.73
CTSA-216ENST00000607212 NUTM1Q86Y26 1132 aa19.62■□□□□ 0.73
CTSA-216ENST00000607212 RTKN2Q8IZC4 609 aa19.62■□□□□ 0.73
CTSA-216ENST00000607212 RGL2O15211 777 aa19.61■□□□□ 0.73
CTSA-216ENST00000607212 POTEIP0CG38 1075 aa19.61■□□□□ 0.73
CTSA-216ENST00000607212 POTEJP0CG39 1038 aa19.61■□□□□ 0.73
CTSA-216ENST00000607212 HSPA1AP0DMV8 641 aaKnown RBP19.61■□□□□ 0.73
CTSA-216ENST00000607212 HSPA1BP0DMV9 641 aaKnown RBP19.61■□□□□ 0.73
CTSA-216ENST00000607212 GPTP24298 496 aa19.61■□□□□ 0.73
CTSA-216ENST00000607212 RPGRQ92834 1020 aaKnown RBP19.61■□□□□ 0.73
CTSA-216ENST00000607212 ZBTB3Q9H5J0 574 aa19.61■□□□□ 0.73
CTSA-216ENST00000607212 MKRN1Q9UHC7 482 aaKnown RBP19.61■□□□□ 0.73
CTSA-216ENST00000607212 MAP3K15Q6ZN16 1313 aa19.6■□□□□ 0.73
CTSA-216ENST00000607212 TNS4Q8IZW8 715 aa19.6■□□□□ 0.73
CTSA-216ENST00000607212 SCN4AP35499 1836 aa19.6■□□□□ 0.73
CTSA-216ENST00000607212 ZNF541Q9H0D2 1346 aa19.59■□□□□ 0.73
CTSA-216ENST00000607212 TTLL7Q6ZT98 887 aa19.59■□□□□ 0.73
CTSA-216ENST00000607212 SYNE4Q8N205 404 aa19.59■□□□□ 0.73
CTSA-216ENST00000607212 C7orf43Q8WVR3 580 aa19.59■□□□□ 0.73
CTSA-216ENST00000607212 ERVV-1B6SEH8 477 aa19.58■□□□□ 0.72
CTSA-216ENST00000607212 TCERG1O14776 1098 aaKnown RBP19.58■□□□□ 0.72
CTSA-216ENST00000607212 IARSP41252 1262 aaKnown RBP19.58■□□□□ 0.72
CTSA-216ENST00000607212 EIF4A1P60842 406 aaKnown RBP19.58■□□□□ 0.72
CTSA-216ENST00000607212 LDHDQ86WU2 507 aa19.58■□□□□ 0.72
CTSA-216ENST00000607212 JDP2Q8WYK2 163 aa19.58■□□□□ 0.72
CTSA-216ENST00000607212 CREBZFQ9NS37 354 aa19.58■□□□□ 0.72
CTSA-216ENST00000607212 TSPYL4Q9UJ04 414 aa19.58■□□□□ 0.72
CTSA-216ENST00000607212 HACL1Q9UJ83 578 aa19.58■□□□□ 0.72
CTSA-216ENST00000607212 ABCC12Q96J65 1359 aa19.57■□□□□ 0.72
CTSA-216ENST00000607212 KLRG2A4D1S0 409 aaPredicted RBP19.57■□□□□ 0.72
CTSA-216ENST00000607212 TAF1DQ9H5J8 278 aaPredicted RBP19.57■□□□□ 0.72
CTSA-216ENST00000607212 EIF2S2P20042 333 aaKnown RBP19.56■□□□□ 0.72
CTSA-216ENST00000607212 PLEKHF1Q96S99 279 aa19.56■□□□□ 0.72
CTSA-216ENST00000607212 TMX4Q9H1E5 349 aaPredicted RBP19.56■□□□□ 0.72
CTSA-216ENST00000607212 EPHX2P34913 555 aa19.55■□□□□ 0.72
CTSA-216ENST00000607212 RBM17Q96I25 401 aaKnown RBP19.55■□□□□ 0.72
CTSA-216ENST00000607212 L3MBTL3Q96JM7 780 aaPredicted RBP19.55■□□□□ 0.72
CTSA-216ENST00000607212 GJA3Q9Y6H8 435 aa19.55■□□□□ 0.72
CTSA-216ENST00000607212 RNF123Q5XPI4 1314 aa19.54■□□□□ 0.72
CTSA-216ENST00000607212 EIF6P56537 245 aaKnown RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms