RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 LAMB2P55268 1798 aa15.32■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 NEURL1BA8MQ27 555 aa15.32■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 GRM8O00222 908 aa15.32■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 RGL2O15211 777 aa15.32■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 CYP19A1P11511 503 aaPredicted RBP15.32■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 CHD1LQ86WJ1 897 aa15.32■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 DNAJC10Q8IXB1 793 aa15.32■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 SSH3Q8TE77 659 aa15.32■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 IL6STP40189 918 aaPredicted RBP15.31■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 TRIM28Q13263 835 aaKnown RBP15.31■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 POLA2Q14181 598 aa15.31■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 GCKRQ14397 625 aa15.31■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 SYTL4Q96C24 671 aaPredicted RBP15.31■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 RBM42Q9BTD8 480 aaKnown RBP15.31■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 C9orf78Q9NZ63 289 aaPredicted RBP15.31■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 LRRFIP2Q9Y608 721 aaKnown RBP15.31■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 SCN7AQ01118 1682 aa15.31■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 RGPD3A6NKT7 1758 aaPredicted RBP15.31■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 RGPD4Q7Z3J3 1758 aa15.31■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 LOC102724428A0A0B4J2F2 783 aa15.3■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 A1BGP04217 495 aa15.3■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 IGKV5-2P06315 115 aa15.3■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 HMGB2P26583 209 aaKnown RBP15.3■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 SIK1P57059 783 aa15.3■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 AIMP1Q12904 312 aaKnown RBP15.3■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 ZNF772Q68DY9 489 aaPredicted RBP15.3■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 SLC4A9Q96Q91 983 aa15.3■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 NBPF7P0C2Y1 421 aaPredicted RBP15.29■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 FAM161AQ3B820 660 aa15.29■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 HSP90AB4PQ58FF6 505 aa15.29■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 HSP90AB3PQ58FF7 597 aa15.29■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 KIF6Q6ZMV9 814 aa15.29■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 CCDC191Q8NCU4 936 aa15.29■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 ZBTB47Q9UFB7 747 aaPredicted RBP15.29■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 MAP3K15Q6ZN16 1313 aa15.28■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 ERVV-1B6SEH8 477 aa15.28■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 MYD88Q99836 296 aa15.28■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 BACH2Q9BYV9 841 aa15.28■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 QTRT2Q9H974 415 aaKnown RBP15.28■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 CNTNAP4Q9C0A0 1308 aa15.27■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 RAB11FIP3O75154 756 aa15.27■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 RGS3P49796 1198 aa15.27■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 CWF19L2Q2TBE0 894 aaKnown RBP15.27■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 CCDC87Q9NVE4 849 aa15.27■□□□□ 0.04
NEDD8-MDP1-203ENST00000604306 AK9Q5TCS8 1911 aa15.27■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 A0A0G2JS52 829 aa15.26■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 PDE4AP27815 886 aa15.26■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 MYT1Q01538 1121 aa15.26■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 ANKRD45Q5TZF3 282 aa15.26■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 SEPT12Q8IYM1 358 aa15.26■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 ACSBG1Q96GR2 724 aa15.26■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 ISCA1Q9BUE6 129 aa15.26■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 CWC25Q9NXE8 425 aaPredicted RBP15.26■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 NOP58Q9Y2X3 529 aaKnown RBP15.26■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 ATP6V1AP38606 617 aa15.25■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 EIF5P55010 431 aaKnown RBP15.25■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 TCIRG1Q13488 830 aa15.25■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 RABL6Q3YEC7 729 aaPredicted RBP15.25■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 GIGYF2Q6Y7W6 1299 aaKnown RBP15.25■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 TTLL7Q6ZT98 887 aa15.25■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 C4BP0C0L5 1744 aa15.25■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 PNMA6EA0A0J9YXQ4 647 aa15.24■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 H7C1W4 665 aa15.24■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 EIF5BO60841 1220 aaKnown RBP15.24■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 CASP7P55210 303 aa15.24■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 RBM6P78332 1123 aaKnown RBP15.24■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 BMP2KLQ5H9B9 411 aa15.24■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 RC3H1Q5TC82 1133 aaKnown RBP15.24■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 PPP1R42Q7Z4L9 355 aa15.24■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 NPM2Q86SE8 214 aaKnown RBP15.24■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 ZBTB1Q9Y2K1 713 aa15.24■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 C4AP0C0L4 1744 aa15.23■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 COL24A1Q17RW2 1714 aa15.23■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 UBR3Q6ZT12 1888 aa15.23■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 A0A087WZG4 1122 aa15.23■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 SRGAP3O43295 1099 aa15.23■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 KCNQ2O43526 872 aa15.23■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 CRKLP46109 303 aaKnown RBP15.23■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 PIP4K2AP48426 406 aaPredicted RBP15.23■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 INTS5Q6P9B9 1019 aaKnown RBP15.23■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 FAM196AQ6ZSG2 479 aa15.23■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 ERC1Q8IUD2 1116 aa15.23■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 LRRCC1Q9C099 1032 aa15.23■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 LNPKQ9C0E8 428 aa15.23■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 BCL11BQ9C0K0 894 aaPredicted RBP15.23■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 OSBPL3Q9H4L5 887 aa15.23■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 AOX1Q06278 1338 aa15.22■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 CDHR2Q9BYE9 1310 aa15.22■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 CASZ1Q86V15 1759 aa15.22■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 C8orf34Q49A92 452 aa15.22■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 KAZALD1Q96I82 304 aa15.22■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 SUCLG2Q96I99 432 aa15.22■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 RBM19Q9Y4C8 960 aaKnown RBP15.22■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 PCCAP05165 728 aaPredicted RBP15.21■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 ITPK1Q13572 414 aa15.21■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 SKAP1Q86WV1 359 aa15.21■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 KIF1BPQ96EK5 621 aa15.21■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 PLA2G12BQ9BX93 195 aa15.21■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 ZBTB3Q9H5J0 574 aa15.21■□□□□ 0.03
NEDD8-MDP1-203ENST00000604306 DDX60Q8IY21 1712 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms