RNA–Protein interactions for RNA: ENST00000603669.5

GRAMD1A-213, Transcript of GRAM domain containing 1A, humanhuman

TSL 5

Gene GRAMD1A, Length 552 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-213ENST00000603669 ST5P78524 1137 aa20.48■□□□□ 0.87
GRAMD1A-213ENST00000603669 DZIP3Q86Y13 1208 aaKnown RBP20.48■□□□□ 0.87
GRAMD1A-213ENST00000603669 MASTLQ96GX5 879 aa20.48■□□□□ 0.87
GRAMD1A-213ENST00000603669 PHACTR3Q96KR7 559 aa20.47■□□□□ 0.87
GRAMD1A-213ENST00000603669 BTBD11A6QL63 1104 aa20.46■□□□□ 0.87
GRAMD1A-213ENST00000603669 C7orf43Q8WVR3 580 aa20.46■□□□□ 0.87
GRAMD1A-213ENST00000603669 SLX4Q8IY92 1834 aa20.46■□□□□ 0.87
GRAMD1A-213ENST00000603669 FER1L6Q2WGJ9 1857 aa20.45■□□□□ 0.86
GRAMD1A-213ENST00000603669 COL11A2P13942 1736 aaPredicted RBP20.45■□□□□ 0.86
GRAMD1A-213ENST00000603669 PRAMEF22A3QJZ6 481 aa20.45■□□□□ 0.86
GRAMD1A-213ENST00000603669 SOGA3Q5TF21 947 aa20.45■□□□□ 0.86
GRAMD1A-213ENST00000603669 NBPF5PQ86XG9 351 aaPredicted RBP20.44■□□□□ 0.86
GRAMD1A-213ENST00000603669 CCER1Q8TC90 406 aaPredicted RBP20.44■□□□□ 0.86
GRAMD1A-213ENST00000603669 TAF1DQ9H5J8 278 aaPredicted RBP20.44■□□□□ 0.86
GRAMD1A-213ENST00000603669 FOXN1O15353 648 aa20.43■□□□□ 0.86
GRAMD1A-213ENST00000603669 OLFM4Q6UX06 510 aa20.43■□□□□ 0.86
GRAMD1A-213ENST00000603669 PASKQ96RG2 1323 aa20.43■□□□□ 0.86
GRAMD1A-213ENST00000603669 CEMIPQ8WUJ3 1361 aa20.43■□□□□ 0.86
GRAMD1A-213ENST00000603669 DICER1Q9UPY3 1922 aaKnown RBP20.43■□□□□ 0.86
GRAMD1A-213ENST00000603669 IQCA1LA6NCM1 817 aa20.42■□□□□ 0.86
GRAMD1A-213ENST00000603669 LDHDQ86WU2 507 aa20.42■□□□□ 0.86
GRAMD1A-213ENST00000603669 ZNF277Q9NRM2 450 aaPredicted RBP20.42■□□□□ 0.86
GRAMD1A-213ENST00000603669 COL3A1P02461 1466 aaPredicted RBP20.42■□□□□ 0.86
GRAMD1A-213ENST00000603669 SCN7AQ01118 1682 aa20.42■□□□□ 0.86
GRAMD1A-213ENST00000603669 ITGBL1O95965 494 aaPredicted RBP20.41■□□□□ 0.86
GRAMD1A-213ENST00000603669 PRKAR2BP31323 418 aa20.41■□□□□ 0.86
GRAMD1A-213ENST00000603669 CCDC93Q567U6 631 aa20.41■□□□□ 0.86
GRAMD1A-213ENST00000603669 EAPPQ56P03 285 aaPredicted RBP20.41■□□□□ 0.86
GRAMD1A-213ENST00000603669 CLEC4GQ6UXB4 293 aa20.41■□□□□ 0.86
GRAMD1A-213ENST00000603669 L3MBTL3Q96JM7 780 aaPredicted RBP20.41■□□□□ 0.86
GRAMD1A-213ENST00000603669 CNTNAP1P78357 1384 aa20.41■□□□□ 0.86
GRAMD1A-213ENST00000603669 FAM177BA6PVY3 158 aa20.4■□□□□ 0.86
GRAMD1A-213ENST00000603669 NPR1P16066 1061 aa20.4■□□□□ 0.86
GRAMD1A-213ENST00000603669 VEGFBP49765 207 aa20.4■□□□□ 0.86
GRAMD1A-213ENST00000603669 ZNF541Q9H0D2 1346 aa20.39■□□□□ 0.85
GRAMD1A-213ENST00000603669 KLRG2A4D1S0 409 aaPredicted RBP20.39■□□□□ 0.85
GRAMD1A-213ENST00000603669 FKBP4Q02790 459 aaKnown RBP eCLIP20.39■□□□□ 0.85
GRAMD1A-213ENST00000603669 TPTE2Q6XPS3 522 aa20.39■□□□□ 0.85
GRAMD1A-213ENST00000603669 CLEC11AQ9Y240 323 aa20.39■□□□□ 0.85
GRAMD1A-213ENST00000603669 TMEM88BA6NKF7 163 aa20.38■□□□□ 0.85
GRAMD1A-213ENST00000603669 NBPF26B4DH59 902 aa20.38■□□□□ 0.85
GRAMD1A-213ENST00000603669 SNRPA1P09661 255 aaKnown RBP20.38■□□□□ 0.85
GRAMD1A-213ENST00000603669 NBPF10Q6P3W6 841 aaKnown RBP20.38■□□□□ 0.85
GRAMD1A-213ENST00000603669 NBPF15Q8N660 670 aa20.38■□□□□ 0.85
GRAMD1A-213ENST00000603669 RSPH6AQ9H0K4 717 aa20.38■□□□□ 0.85
GRAMD1A-213ENST00000603669 NIP7Q9Y221 180 aaKnown RBP eCLIP20.38■□□□□ 0.85
GRAMD1A-213ENST00000603669 MCM10Q7L590 875 aa20.37■□□□□ 0.85
GRAMD1A-213ENST00000603669 HACL1Q9UJ83 578 aa20.37■□□□□ 0.85
GRAMD1A-213ENST00000603669 ZNF652Q9Y2D9 606 aa20.37■□□□□ 0.85
GRAMD1A-213ENST00000603669 SIPA1L3O60292 1781 aaPredicted RBP20.36■□□□□ 0.85
GRAMD1A-213ENST00000603669 EPHX2P34913 555 aa20.36■□□□□ 0.85
GRAMD1A-213ENST00000603669 PRDM10Q9NQV6 1147 aa20.36■□□□□ 0.85
GRAMD1A-213ENST00000603669 DCTN1Q14203 1278 aa20.35■□□□□ 0.85
GRAMD1A-213ENST00000603669 HLFQ16534 295 aa20.35■□□□□ 0.85
GRAMD1A-213ENST00000603669 RTKN2Q8IZC4 609 aa20.35■□□□□ 0.85
GRAMD1A-213ENST00000603669 SYNE4Q8N205 404 aa20.35■□□□□ 0.85
GRAMD1A-213ENST00000603669 CACNA1SQ13698 1873 aa20.35■□□□□ 0.85
GRAMD1A-213ENST00000603669 NPC1L1Q9UHC9 1359 aa20.34■□□□□ 0.85
GRAMD1A-213ENST00000603669 CTCFP49711 727 aaPredicted RBP20.34■□□□□ 0.85
GRAMD1A-213ENST00000603669 MAP1SQ66K74 1059 aaPredicted RBP20.34■□□□□ 0.85
GRAMD1A-213ENST00000603669 CNTROBQ8N137 903 aa20.34■□□□□ 0.85
GRAMD1A-213ENST00000603669 RTF1Q92541 710 aaKnown RBP20.34■□□□□ 0.85
GRAMD1A-213ENST00000603669 AIDAQ96BJ3 306 aa20.34■□□□□ 0.85
GRAMD1A-213ENST00000603669 RNF123Q5XPI4 1314 aa20.33■□□□□ 0.85
GRAMD1A-213ENST00000603669 FZD9O00144 591 aa20.33■□□□□ 0.85
GRAMD1A-213ENST00000603669 WBP1LQ9NX94 342 aa20.33■□□□□ 0.85
GRAMD1A-213ENST00000603669 GTF2E1P29083 439 aaPredicted RBP20.32■□□□□ 0.84
GRAMD1A-213ENST00000603669 ALDH1B1P30837 517 aa20.32■□□□□ 0.84
GRAMD1A-213ENST00000603669 IARSP41252 1262 aaKnown RBP20.32■□□□□ 0.84
GRAMD1A-213ENST00000603669 LBX1P52954 281 aa20.32■□□□□ 0.84
GRAMD1A-213ENST00000603669 MIS18AQ9NYP9 233 aa20.32■□□□□ 0.84
GRAMD1A-213ENST00000603669 U2AF1L5P0DN76 240 aaPredicted RBP20.31■□□□□ 0.84
GRAMD1A-213ENST00000603669 U2AF1Q01081 240 aaKnown RBP eCLIP20.31■□□□□ 0.84
GRAMD1A-213ENST00000603669 DEFB115Q30KQ5 88 aa20.31■□□□□ 0.84
GRAMD1A-213ENST00000603669 PNMA8AQ86V59 439 aaPredicted RBP20.31■□□□□ 0.84
GRAMD1A-213ENST00000603669 CFAP53Q96M91 514 aa20.31■□□□□ 0.84
GRAMD1A-213ENST00000603669 SCN4AP35499 1836 aa20.3■□□□□ 0.84
GRAMD1A-213ENST00000603669 NGEFQ8N5V2 710 aa20.3■□□□□ 0.84
GRAMD1A-213ENST00000603669 NUDCQ9Y266 331 aa20.3■□□□□ 0.84
GRAMD1A-213ENST00000603669 BCORQ6W2J9 1755 aa20.3■□□□□ 0.84
GRAMD1A-213ENST00000603669 RGL2O15211 777 aa20.29■□□□□ 0.84
GRAMD1A-213ENST00000603669 NUTM1Q86Y26 1132 aa20.29■□□□□ 0.84
GRAMD1A-213ENST00000603669 GPC2Q8N158 579 aa20.29■□□□□ 0.84
GRAMD1A-213ENST00000603669 ARFGEF2Q9Y6D5 1785 aa20.29■□□□□ 0.84
GRAMD1A-213ENST00000603669 RASSF10A6NK89 507 aa20.28■□□□□ 0.84
GRAMD1A-213ENST00000603669 TAF7Q15545 349 aaPredicted RBP20.28■□□□□ 0.84
GRAMD1A-213ENST00000603669 JDP2Q8WYK2 163 aa20.28■□□□□ 0.84
GRAMD1A-213ENST00000603669 GJA3Q9Y6H8 435 aa20.28■□□□□ 0.84
GRAMD1A-213ENST00000603669 FMR1Q06787 632 aaKnown RBP eCLIP20.27■□□□□ 0.84
GRAMD1A-213ENST00000603669 PSMD1Q99460 953 aa20.27■□□□□ 0.84
GRAMD1A-213ENST00000603669 ABT1Q9ULW3 272 aaKnown RBP20.27■□□□□ 0.84
GRAMD1A-213ENST00000603669 CRY2Q49AN0 593 aa20.26■□□□□ 0.83
GRAMD1A-213ENST00000603669 WDR33Q9C0J8 1336 aaKnown RBP20.26■□□□□ 0.83
GRAMD1A-213ENST00000603669 HTATSF1O43719 755 aaKnown RBP20.25■□□□□ 0.83
GRAMD1A-213ENST00000603669 HSPA8P11142 646 aaKnown RBP20.25■□□□□ 0.83
GRAMD1A-213ENST00000603669 SLC51AQ86UW1 340 aa20.25■□□□□ 0.83
GRAMD1A-213ENST00000603669 ABCC12Q96J65 1359 aa20.24■□□□□ 0.83
GRAMD1A-213ENST00000603669 TCERG1O14776 1098 aaKnown RBP20.24■□□□□ 0.83
GRAMD1A-213ENST00000603669 PPP2R1AP30153 589 aa20.24■□□□□ 0.83
GRAMD1A-213ENST00000603669 EPS15P42566 896 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms