RNA–Protein interactions for RNA: ENST00000602670.1

SFXN2-209, Transcript of sideroflexin 2, humanhuman

TSL 4

Gene SFXN2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-209ENST00000602670 HACL1Q9UJ83 578 aa17.31■□□□□ 0.36
SFXN2-209ENST00000602670 ZNF330Q9Y3S2 320 aaPredicted RBP17.31■□□□□ 0.36
SFXN2-209ENST00000602670 THSD7BQ9C0I4 1608 aa17.31■□□□□ 0.36
SFXN2-209ENST00000602670 BCORQ6W2J9 1755 aa17.3■□□□□ 0.36
SFXN2-209ENST00000602670 WDR33Q9C0J8 1336 aaKnown RBP17.3■□□□□ 0.36
SFXN2-209ENST00000602670 CAMTA2O94983 1202 aa17.3■□□□□ 0.36
SFXN2-209ENST00000602670 EPHX2P34913 555 aa17.3■□□□□ 0.36
SFXN2-209ENST00000602670 ST5P78524 1137 aa17.3■□□□□ 0.36
SFXN2-209ENST00000602670 MAP2K1Q02750 393 aaPredicted RBP17.3■□□□□ 0.36
SFXN2-209ENST00000602670 CCDC93Q567U6 631 aa17.3■□□□□ 0.36
SFXN2-209ENST00000602670 SETDB2Q96T68 719 aa17.3■□□□□ 0.36
SFXN2-209ENST00000602670 CLEC11AQ9Y240 323 aa17.3■□□□□ 0.36
SFXN2-209ENST00000602670 HEG1Q9ULI3 1381 aa17.29■□□□□ 0.36
SFXN2-209ENST00000602670 HMOX1P09601 288 aa17.29■□□□□ 0.36
SFXN2-209ENST00000602670 IL6STP40189 918 aaPredicted RBP17.29■□□□□ 0.36
SFXN2-209ENST00000602670 MAP1SQ66K74 1059 aaPredicted RBP17.29■□□□□ 0.36
SFXN2-209ENST00000602670 TTC5Q8N0Z6 440 aa17.29■□□□□ 0.36
SFXN2-209ENST00000602670 CNTROBQ8N137 903 aa17.29■□□□□ 0.36
SFXN2-209ENST00000602670 ZNF496Q96IT1 587 aaPredicted RBP17.29■□□□□ 0.36
SFXN2-209ENST00000602670 ZNF277Q9NRM2 450 aaPredicted RBP17.29■□□□□ 0.36
SFXN2-209ENST00000602670 RNF123Q5XPI4 1314 aa17.28■□□□□ 0.36
SFXN2-209ENST00000602670 NPHP1O15259 732 aa17.28■□□□□ 0.36
SFXN2-209ENST00000602670 FKBP4Q02790 459 aaKnown RBP eCLIP17.28■□□□□ 0.36
SFXN2-209ENST00000602670 MLLT1Q03111 559 aaPredicted RBP17.28■□□□□ 0.36
SFXN2-209ENST00000602670 RGS19P49795 217 aa17.27■□□□□ 0.36
SFXN2-209ENST00000602670 PNMA8AQ86V59 439 aaPredicted RBP17.27■□□□□ 0.36
SFXN2-209ENST00000602670 PCDH10Q9P2E7 1040 aa17.27■□□□□ 0.36
SFXN2-209ENST00000602670 ABT1Q9ULW3 272 aaKnown RBP17.27■□□□□ 0.36
SFXN2-209ENST00000602670 SIPA1L3O60292 1781 aaPredicted RBP17.27■□□□□ 0.35
SFXN2-209ENST00000602670 CCDC85CA6NKD9 419 aa17.26■□□□□ 0.35
SFXN2-209ENST00000602670 TEX13AQ9BXU3 409 aaPredicted RBP17.26■□□□□ 0.35
SFXN2-209ENST00000602670 A1BGP04217 495 aa17.25■□□□□ 0.35
SFXN2-209ENST00000602670 ZNF790Q6PG37 636 aa17.25■□□□□ 0.35
SFXN2-209ENST00000602670 OLFM4Q6UX06 510 aa17.25■□□□□ 0.35
SFXN2-209ENST00000602670 FZD9O00144 591 aa17.24■□□□□ 0.35
SFXN2-209ENST00000602670 NPR1P16066 1061 aa17.24■□□□□ 0.35
SFXN2-209ENST00000602670 DDX21Q9NR30 783 aaKnown RBP eCLIP17.24■□□□□ 0.35
SFXN2-209ENST00000602670 DZIP3Q86Y13 1208 aaKnown RBP17.23■□□□□ 0.35
SFXN2-209ENST00000602670 LTBP1Q14766 1721 aa17.23■□□□□ 0.35
SFXN2-209ENST00000602670 SNED1Q8TER0 1413 aa17.22■□□□□ 0.35
SFXN2-209ENST00000602670 KLRG2A4D1S0 409 aaPredicted RBP17.22■□□□□ 0.35
SFXN2-209ENST00000602670 IARSP41252 1262 aaKnown RBP17.22■□□□□ 0.35
SFXN2-209ENST00000602670 NPM2Q86SE8 214 aaKnown RBP17.22■□□□□ 0.35
SFXN2-209ENST00000602670 NBPF5PQ86XG9 351 aaPredicted RBP17.22■□□□□ 0.35
SFXN2-209ENST00000602670 RTKN2Q8IZC4 609 aa17.22■□□□□ 0.35
SFXN2-209ENST00000602670 GPC2Q8N158 579 aa17.22■□□□□ 0.35
SFXN2-209ENST00000602670 IL17REQ8NFR9 667 aa17.22■□□□□ 0.35
SFXN2-209ENST00000602670 CAPNS2Q96L46 248 aa17.22■□□□□ 0.35
SFXN2-209ENST00000602670 FMR1Q06787 632 aaKnown RBP eCLIP17.21■□□□□ 0.35
SFXN2-209ENST00000602670 TEFQ10587 303 aa17.21■□□□□ 0.35
SFXN2-209ENST00000602670 FMNL2Q96PY5 1086 aa17.21■□□□□ 0.35
SFXN2-209ENST00000602670 COL4A5P29400 1685 aa17.2■□□□□ 0.34
SFXN2-209ENST00000602670 ECE1P42892 770 aa17.2■□□□□ 0.34
SFXN2-209ENST00000602670 AMER1Q5JTC6 1135 aaPredicted RBP17.2■□□□□ 0.34
SFXN2-209ENST00000602670 CYP4F22Q6NT55 531 aa17.2■□□□□ 0.34
SFXN2-209ENST00000602670 KNSTRNQ9Y448 316 aa17.2■□□□□ 0.34
SFXN2-209ENST00000602670 TNRC18O15417 2968 aaPredicted RBP17.2■□□□□ 0.34
SFXN2-209ENST00000602670 TRPM7Q96QT4 1865 aa17.19■□□□□ 0.34
SFXN2-209ENST00000602670 PIP4K2AP48426 406 aaPredicted RBP17.19■□□□□ 0.34
SFXN2-209ENST00000602670 CLEC4GQ6UXB4 293 aa17.19■□□□□ 0.34
SFXN2-209ENST00000602670 PAXIP1Q6ZW49 1069 aaPredicted RBP17.19■□□□□ 0.34
SFXN2-209ENST00000602670 SYNE4Q8N205 404 aa17.19■□□□□ 0.34
SFXN2-209ENST00000602670 GPR101Q96P66 508 aaPredicted RBP17.19■□□□□ 0.34
SFXN2-209ENST00000602670 BEGAINQ9BUH8 593 aa17.19■□□□□ 0.34
SFXN2-209ENST00000602670 KCNQ3O43525 872 aa17.18■□□□□ 0.34
SFXN2-209ENST00000602670 HSPA5P11021 654 aaKnown RBP17.18■□□□□ 0.34
SFXN2-209ENST00000602670 GRM1Q13255 1194 aa17.18■□□□□ 0.34
SFXN2-209ENST00000602670 TSKSQ9UJT2 592 aa17.18■□□□□ 0.34
SFXN2-209ENST00000602670 TIMELESSQ9UNS1 1208 aa17.18■□□□□ 0.34
SFXN2-209ENST00000602670 GNAT3A8MTJ3 354 aa17.17■□□□□ 0.34
SFXN2-209ENST00000602670 DIAPH1O60610 1272 aaKnown RBP17.17■□□□□ 0.34
SFXN2-209ENST00000602670 CST9Q5W186 159 aa17.17■□□□□ 0.34
SFXN2-209ENST00000602670 CEMIPQ8WUJ3 1361 aa17.16■□□□□ 0.34
SFXN2-209ENST00000602670 TRAF5O00463 557 aa17.16■□□□□ 0.34
SFXN2-209ENST00000602670 SCNN1DP51172 638 aa17.16■□□□□ 0.34
SFXN2-209ENST00000602670 EIF4G2P78344 907 aaKnown RBP eCLIP17.16■□□□□ 0.34
SFXN2-209ENST00000602670 TPTE2Q6XPS3 522 aa17.16■□□□□ 0.34
SFXN2-209ENST00000602670 PSMD1Q99460 953 aa17.16■□□□□ 0.34
SFXN2-209ENST00000602670 ZNF652Q9Y2D9 606 aa17.16■□□□□ 0.34
SFXN2-209ENST00000602670 USP16Q9Y5T5 823 aa17.16■□□□□ 0.34
SFXN2-209ENST00000602670 GJA3Q9Y6H8 435 aa17.16■□□□□ 0.34
SFXN2-209ENST00000602670 TLL2Q9Y6L7 1015 aa17.16■□□□□ 0.34
SFXN2-209ENST00000602670 PDE4DIPQ5VU43 2346 aa17.15■□□□□ 0.34
SFXN2-209ENST00000602670 LMOD1P29536 600 aaPredicted RBP17.15■□□□□ 0.34
SFXN2-209ENST00000602670 EPS15P42566 896 aa17.15■□□□□ 0.34
SFXN2-209ENST00000602670 GAS2L2Q8NHY3 880 aa17.15■□□□□ 0.34
SFXN2-209ENST00000602670 JDP2Q8WYK2 163 aa17.15■□□□□ 0.34
SFXN2-209ENST00000602670 MCOLN1Q9GZU1 580 aa17.15■□□□□ 0.34
SFXN2-209ENST00000602670 NIP7Q9Y221 180 aaKnown RBP eCLIP17.15■□□□□ 0.34
SFXN2-209ENST00000602670 COL3A1P02461 1466 aaPredicted RBP17.14■□□□□ 0.33
SFXN2-209ENST00000602670 PRAMEF22A3QJZ6 481 aa17.14■□□□□ 0.33
SFXN2-209ENST00000602670 AOC2O75106 756 aa17.14■□□□□ 0.33
SFXN2-209ENST00000602670 ALDH1B1P30837 517 aa17.14■□□□□ 0.33
SFXN2-209ENST00000602670 MAP2K2P36507 400 aa17.14■□□□□ 0.33
SFXN2-209ENST00000602670 EIF6P56537 245 aaKnown RBP17.14■□□□□ 0.33
SFXN2-209ENST00000602670 CASP8AP2Q9UKL3 1982 aa17.13■□□□□ 0.33
SFXN2-209ENST00000602670 FAM177BA6PVY3 158 aa17.13■□□□□ 0.33
SFXN2-209ENST00000602670 CFAP44Q96MT7 982 aa17.13■□□□□ 0.33
SFXN2-209ENST00000602670 BTBD11A6QL63 1104 aa17.12■□□□□ 0.33
SFXN2-209ENST00000602670 RGL2O15211 777 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms