RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-231ENST00000602190 FMNL2Q96PY5 1086 aa24.73■■□□□ 1.55
IRF3-231ENST00000602190 RGL2O15211 777 aa24.72■■□□□ 1.55
IRF3-231ENST00000602190 DDNO94850 711 aaPredicted RBP24.72■■□□□ 1.55
IRF3-231ENST00000602190 A1BGP04217 495 aa24.72■■□□□ 1.55
IRF3-231ENST00000602190 SOGA3Q5TF21 947 aa24.72■■□□□ 1.55
IRF3-231ENST00000602190 CCDC24Q8N4L8 307 aa24.72■■□□□ 1.55
IRF3-231ENST00000602190 SNED1Q8TER0 1413 aa24.71■■□□□ 1.55
IRF3-231ENST00000602190 CNTNAP1P78357 1384 aa24.71■■□□□ 1.55
IRF3-231ENST00000602190 MASTLQ96GX5 879 aa24.71■■□□□ 1.55
IRF3-231ENST00000602190 SETDB2Q96T68 719 aa24.71■■□□□ 1.55
IRF3-231ENST00000602190 PCGF6Q9BYE7 350 aa24.71■■□□□ 1.55
IRF3-231ENST00000602190 CLEC4GQ6UXB4 293 aa24.7■■□□□ 1.54
IRF3-231ENST00000602190 CAPN15O75808 1086 aa24.69■■□□□ 1.54
IRF3-231ENST00000602190 KCNQ3O43525 872 aa24.68■■□□□ 1.54
IRF3-231ENST00000602190 ST5P78524 1137 aa24.67■■□□□ 1.54
IRF3-231ENST00000602190 CC2D1BQ5T0F9 858 aaKnown RBP24.67■■□□□ 1.54
IRF3-231ENST00000602190 LDHDQ86WU2 507 aa24.67■■□□□ 1.54
IRF3-231ENST00000602190 DZIP3Q86Y13 1208 aaKnown RBP24.67■■□□□ 1.54
IRF3-231ENST00000602190 ZNF219Q9P2Y4 722 aaPredicted RBP24.67■■□□□ 1.54
IRF3-231ENST00000602190 IQCA1LA6NCM1 817 aa24.66■■□□□ 1.54
IRF3-231ENST00000602190 ITGBL1O95965 494 aaPredicted RBP24.66■■□□□ 1.54
IRF3-231ENST00000602190 TAF1DQ9H5J8 278 aaPredicted RBP24.66■■□□□ 1.54
IRF3-231ENST00000602190 USP16Q9Y5T5 823 aa24.66■■□□□ 1.54
IRF3-231ENST00000602190 PHACTR3Q96KR7 559 aa24.65■■□□□ 1.54
IRF3-231ENST00000602190 RSPH6AQ9H0K4 717 aa24.65■■□□□ 1.54
IRF3-231ENST00000602190 MKRN1Q9UHC7 482 aaKnown RBP24.64■■□□□ 1.54
IRF3-231ENST00000602190 LAMB4A4D0S4 1761 aa24.64■■□□□ 1.53
IRF3-231ENST00000602190 CCDC93Q567U6 631 aa24.63■■□□□ 1.53
IRF3-231ENST00000602190 PRDM10Q9NQV6 1147 aa24.63■■□□□ 1.53
IRF3-231ENST00000602190 ZNF330Q9Y3S2 320 aaPredicted RBP24.63■■□□□ 1.53
IRF3-231ENST00000602190 BTBD11A6QL63 1104 aa24.62■■□□□ 1.53
IRF3-231ENST00000602190 FOXN1O15353 648 aa24.62■■□□□ 1.53
IRF3-231ENST00000602190 NPR1P16066 1061 aa24.62■■□□□ 1.53
IRF3-231ENST00000602190 FKBP4Q02790 459 aaKnown RBP eCLIP24.62■■□□□ 1.53
IRF3-231ENST00000602190 PRAMEF22A3QJZ6 481 aa24.61■■□□□ 1.53
IRF3-231ENST00000602190 U2SURPO15042 1029 aaKnown RBP24.61■■□□□ 1.53
IRF3-231ENST00000602190 THSD7BQ9C0I4 1608 aa24.61■■□□□ 1.53
IRF3-231ENST00000602190 ZNF541Q9H0D2 1346 aa24.61■■□□□ 1.53
IRF3-231ENST00000602190 NBPF26B4DH59 902 aa24.6■■□□□ 1.53
IRF3-231ENST00000602190 NBPF10Q6P3W6 841 aaKnown RBP24.6■■□□□ 1.53
IRF3-231ENST00000602190 NBPF15Q8N660 670 aa24.6■■□□□ 1.53
IRF3-231ENST00000602190 PRKAR2BP31323 418 aa24.59■■□□□ 1.53
IRF3-231ENST00000602190 NBPF5PQ86XG9 351 aaPredicted RBP24.59■■□□□ 1.53
IRF3-231ENST00000602190 FZD9O00144 591 aa24.58■■□□□ 1.53
IRF3-231ENST00000602190 SNRPA1P09661 255 aaKnown RBP24.58■■□□□ 1.53
IRF3-231ENST00000602190 PIP4K2AP48426 406 aaPredicted RBP24.58■■□□□ 1.53
IRF3-231ENST00000602190 ZNF652Q9Y2D9 606 aa24.58■■□□□ 1.53
IRF3-231ENST00000602190 COL4A5P29400 1685 aa24.57■■□□□ 1.52
IRF3-231ENST00000602190 TMEM88BA6NKF7 163 aa24.57■■□□□ 1.52
IRF3-231ENST00000602190 NPM2Q86SE8 214 aaKnown RBP24.57■■□□□ 1.52
IRF3-231ENST00000602190 NUP98P52948 1817 aa24.56■■□□□ 1.52
IRF3-231ENST00000602190 LTBP1Q14766 1721 aa24.56■■□□□ 1.52
IRF3-231ENST00000602190 RIC1Q4ADV7 1423 aa24.56■■□□□ 1.52
IRF3-231ENST00000602190 VEGFBP49765 207 aa24.56■■□□□ 1.52
IRF3-231ENST00000602190 WBP1LQ9NX94 342 aa24.56■■□□□ 1.52
IRF3-231ENST00000602190 KDM3BQ7LBC6 1761 aa24.56■■□□□ 1.52
IRF3-231ENST00000602190 RASSF10A6NK89 507 aa24.55■■□□□ 1.52
IRF3-231ENST00000602190 CRY2Q49AN0 593 aa24.55■■□□□ 1.52
IRF3-231ENST00000602190 TPTE2Q6XPS3 522 aa24.55■■□□□ 1.52
IRF3-231ENST00000602190 RTKN2Q8IZC4 609 aa24.55■■□□□ 1.52
IRF3-231ENST00000602190 ZNF277Q9NRM2 450 aaPredicted RBP24.55■■□□□ 1.52
IRF3-231ENST00000602190 HACL1Q9UJ83 578 aa24.55■■□□□ 1.52
IRF3-231ENST00000602190 NPHP1O15259 732 aa24.54■■□□□ 1.52
IRF3-231ENST00000602190 OLFM4Q6UX06 510 aa24.54■■□□□ 1.52
IRF3-231ENST00000602190 EPHX2P34913 555 aa24.53■■□□□ 1.52
IRF3-231ENST00000602190 PSMD1Q99460 953 aa24.53■■□□□ 1.52
IRF3-231ENST00000602190 NIP7Q9Y221 180 aaKnown RBP eCLIP24.53■■□□□ 1.52
IRF3-231ENST00000602190 HTATSF1O43719 755 aaKnown RBP24.52■■□□□ 1.52
IRF3-231ENST00000602190 IARSP41252 1262 aaKnown RBP24.52■■□□□ 1.52
IRF3-231ENST00000602190 CTCFP49711 727 aaPredicted RBP24.52■■□□□ 1.52
IRF3-231ENST00000602190 PNMA8AQ86V59 439 aaPredicted RBP24.51■■□□□ 1.51
IRF3-231ENST00000602190 GPC2Q8N158 579 aa24.51■■□□□ 1.51
IRF3-231ENST00000602190 ABCC12Q96J65 1359 aa24.51■■□□□ 1.51
IRF3-231ENST00000602190 IBTKQ9P2D0 1353 aaPredicted RBP24.51■■□□□ 1.51
IRF3-231ENST00000602190 DLG5Q8TDM6 1919 aa24.51■■□□□ 1.51
IRF3-231ENST00000602190 ALDH1B1P30837 517 aa24.5■■□□□ 1.51
IRF3-231ENST00000602190 HLFQ16534 295 aa24.5■■□□□ 1.51
IRF3-231ENST00000602190 MCM10Q7L590 875 aa24.5■■□□□ 1.51
IRF3-231ENST00000602190 RNF123Q5XPI4 1314 aa24.49■■□□□ 1.51
IRF3-231ENST00000602190 SYNE4Q8N205 404 aa24.48■■□□□ 1.51
IRF3-231ENST00000602190 CCER1Q8TC90 406 aaPredicted RBP24.48■■□□□ 1.51
IRF3-231ENST00000602190 TRPM7Q96QT4 1865 aa24.48■■□□□ 1.51
IRF3-231ENST00000602190 HOXA10P31260 410 aaPredicted RBP24.47■■□□□ 1.51
IRF3-231ENST00000602190 CC2D2BQ6DHV5 1058 aa24.47■■□□□ 1.51
IRF3-231ENST00000602190 CNTROBQ8N137 903 aa24.47■■□□□ 1.51
IRF3-231ENST00000602190 CFAP53Q96M91 514 aa24.47■■□□□ 1.51
IRF3-231ENST00000602190 ERVV-1B6SEH8 477 aa24.46■■□□□ 1.51
IRF3-231ENST00000602190 EAPPQ56P03 285 aaPredicted RBP24.46■■□□□ 1.51
IRF3-231ENST00000602190 HSPA8P11142 646 aaKnown RBP24.45■■□□□ 1.5
IRF3-231ENST00000602190 NUDCQ9Y266 331 aa24.45■■□□□ 1.5
IRF3-231ENST00000602190 DCTN1Q14203 1278 aa24.44■■□□□ 1.5
IRF3-231ENST00000602190 TAF7Q15545 349 aaPredicted RBP24.44■■□□□ 1.5
IRF3-231ENST00000602190 DEFB115Q30KQ5 88 aa24.44■■□□□ 1.5
IRF3-231ENST00000602190 MAP1SQ66K74 1059 aaPredicted RBP24.44■■□□□ 1.5
IRF3-231ENST00000602190 RTF1Q92541 710 aaKnown RBP24.44■■□□□ 1.5
IRF3-231ENST00000602190 AIDAQ96BJ3 306 aa24.44■■□□□ 1.5
IRF3-231ENST00000602190 LBX1P52954 281 aa24.43■■□□□ 1.5
IRF3-231ENST00000602190 PPP2R1AP30153 589 aa24.42■■□□□ 1.5
IRF3-231ENST00000602190 SCNN1DP51172 638 aa24.42■■□□□ 1.5
IRF3-231ENST00000602190 GRIPAP1Q4V328 841 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms