RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 PALLDQ8WX93 1383 aa18.07■□□□□ 0.48
ZNF548-212ENST00000602086 MYL6BP14649 208 aa18.07■□□□□ 0.48
ZNF548-212ENST00000602086 PLBD2Q8NHP8 589 aa18.07■□□□□ 0.48
ZNF548-212ENST00000602086 HDAC5Q9UQL6 1122 aa18.07■□□□□ 0.48
ZNF548-212ENST00000602086 BTAF1O14981 1849 aa18.07■□□□□ 0.48
ZNF548-212ENST00000602086 ARFGEF2Q9Y6D5 1785 aa18.07■□□□□ 0.48
ZNF548-212ENST00000602086 LOC102724428A0A0B4J2F2 783 aa18.06■□□□□ 0.48
ZNF548-212ENST00000602086 A1BGP04217 495 aa18.06■□□□□ 0.48
ZNF548-212ENST00000602086 SIK1P57059 783 aa18.06■□□□□ 0.48
ZNF548-212ENST00000602086 MEIS3Q99687 375 aa18.06■□□□□ 0.48
ZNF548-212ENST00000602086 METTL22Q9BUU2 404 aaPredicted RBP18.06■□□□□ 0.48
ZNF548-212ENST00000602086 RGPD3A6NKT7 1758 aaPredicted RBP18.05■□□□□ 0.48
ZNF548-212ENST00000602086 RGPD4Q7Z3J3 1758 aa18.05■□□□□ 0.48
ZNF548-212ENST00000602086 KCNQ2O43526 872 aa18.05■□□□□ 0.48
ZNF548-212ENST00000602086 GNAI2P04899 355 aa18.05■□□□□ 0.48
ZNF548-212ENST00000602086 NEXNQ0ZGT2 675 aa18.05■□□□□ 0.48
ZNF548-212ENST00000602086 RIC3Q7Z5B4 369 aa18.05■□□□□ 0.48
ZNF548-212ENST00000602086 SMC5Q8IY18 1101 aa18.05■□□□□ 0.48
ZNF548-212ENST00000602086 ANKRD44Q8N8A2 993 aa18.05■□□□□ 0.48
ZNF548-212ENST00000602086 USP44Q9H0E7 712 aa18.05■□□□□ 0.48
ZNF548-212ENST00000602086 COL5A3P25940 1745 aaPredicted RBP18.05■□□□□ 0.48
ZNF548-212ENST00000602086 UTYO14607 1347 aa18.04■□□□□ 0.48
ZNF548-212ENST00000602086 AIMP1Q12904 312 aaKnown RBP18.04■□□□□ 0.48
ZNF548-212ENST00000602086 IL6STP40189 918 aaPredicted RBP18.03■□□□□ 0.48
ZNF548-212ENST00000602086 GCC1Q96CN9 775 aa18.03■□□□□ 0.48
ZNF548-212ENST00000602086 LY75O60449 1722 aa18.03■□□□□ 0.48
ZNF548-212ENST00000602086 CASZ1Q86V15 1759 aa18.02■□□□□ 0.48
ZNF548-212ENST00000602086 UBTFL1P0CB47 393 aaPredicted RBP18.02■□□□□ 0.48
ZNF548-212ENST00000602086 CEP85Q6P2H3 762 aa18.02■□□□□ 0.48
ZNF548-212ENST00000602086 BCL11BQ9C0K0 894 aaPredicted RBP18.02■□□□□ 0.48
ZNF548-212ENST00000602086 ATP6V1AP38606 617 aa18.01■□□□□ 0.47
ZNF548-212ENST00000602086 SIRT2Q8IXJ6 389 aa18.01■□□□□ 0.47
ZNF548-212ENST00000602086 COL15A1P39059 1388 aa18.01■□□□□ 0.47
ZNF548-212ENST00000602086 HMMRO75330 724 aa18■□□□□ 0.47
ZNF548-212ENST00000602086 IGKV5-2P06315 115 aa18■□□□□ 0.47
ZNF548-212ENST00000602086 HMGB2P26583 209 aaKnown RBP18■□□□□ 0.47
ZNF548-212ENST00000602086 C1orf115Q9H7X2 142 aa18■□□□□ 0.47
ZNF548-212ENST00000602086 CCDC87Q9NVE4 849 aa18■□□□□ 0.47
ZNF548-212ENST00000602086 NEURL1BA8MQ27 555 aa17.99■□□□□ 0.47
ZNF548-212ENST00000602086 TRIM28Q13263 835 aaKnown RBP17.99■□□□□ 0.47
ZNF548-212ENST00000602086 AFDNP55196 1824 aaKnown RBP17.99■□□□□ 0.47
ZNF548-212ENST00000602086 ERVV-1B6SEH8 477 aa17.98■□□□□ 0.47
ZNF548-212ENST00000602086 GRM8O00222 908 aa17.98■□□□□ 0.47
ZNF548-212ENST00000602086 RGL2O15211 777 aa17.98■□□□□ 0.47
ZNF548-212ENST00000602086 PIP4K2AP48426 406 aaPredicted RBP17.98■□□□□ 0.47
ZNF548-212ENST00000602086 EIF5P55010 431 aaKnown RBP17.98■□□□□ 0.47
ZNF548-212ENST00000602086 ATP8B2P98198 1209 aa17.98■□□□□ 0.47
ZNF548-212ENST00000602086 ITPK1Q13572 414 aa17.98■□□□□ 0.47
ZNF548-212ENST00000602086 RC3H1Q5TC82 1133 aaKnown RBP17.98■□□□□ 0.47
ZNF548-212ENST00000602086 INTS5Q6P9B9 1019 aaKnown RBP17.98■□□□□ 0.47
ZNF548-212ENST00000602086 KIF6Q6ZMV9 814 aa17.98■□□□□ 0.47
ZNF548-212ENST00000602086 TTLL7Q6ZT98 887 aa17.98■□□□□ 0.47
ZNF548-212ENST00000602086 PTF1AQ7RTS3 328 aa17.98■□□□□ 0.47
ZNF548-212ENST00000602086 DCTPP1Q9H773 170 aa17.98■□□□□ 0.47
ZNF548-212ENST00000602086 ZBTB1Q9Y2K1 713 aa17.98■□□□□ 0.47
ZNF548-212ENST00000602086 MAP3K15Q6ZN16 1313 aa17.98■□□□□ 0.47
ZNF548-212ENST00000602086 CNTNAP4Q9C0A0 1308 aa17.98■□□□□ 0.47
ZNF548-212ENST00000602086 MYH14Q7Z406 1995 aaKnown RBP17.97■□□□□ 0.47
ZNF548-212ENST00000602086 MTX1Q13505 466 aa17.97■□□□□ 0.47
ZNF548-212ENST00000602086 GCKRQ14397 625 aa17.97■□□□□ 0.47
ZNF548-212ENST00000602086 MYD88Q99836 296 aa17.97■□□□□ 0.47
ZNF548-212ENST00000602086 C9orf78Q9NZ63 289 aaPredicted RBP17.97■□□□□ 0.47
ZNF548-212ENST00000602086 CRKLP46109 303 aaKnown RBP17.96■□□□□ 0.47
ZNF548-212ENST00000602086 CWF19L2Q2TBE0 894 aaKnown RBP17.96■□□□□ 0.47
ZNF548-212ENST00000602086 HSP90AB3PQ58FF7 597 aa17.96■□□□□ 0.47
ZNF548-212ENST00000602086 CCDC191Q8NCU4 936 aa17.96■□□□□ 0.47
ZNF548-212ENST00000602086 ANO8Q9HCE9 1232 aaPredicted RBP17.96■□□□□ 0.47
ZNF548-212ENST00000602086 PPP1R1BQ9UD71 204 aaPredicted RBP17.96■□□□□ 0.47
ZNF548-212ENST00000602086 LRRFIP2Q9Y608 721 aaKnown RBP17.96■□□□□ 0.47
ZNF548-212ENST00000602086 ANKRD36CQ5JPF3 1778 aa17.95■□□□□ 0.46
ZNF548-212ENST00000602086 NBPF7P0C2Y1 421 aaPredicted RBP17.95■□□□□ 0.46
ZNF548-212ENST00000602086 YY1P25490 414 aa17.95■□□□□ 0.46
ZNF548-212ENST00000602086 TCIRG1Q13488 830 aa17.95■□□□□ 0.46
ZNF548-212ENST00000602086 GIGYF2Q6Y7W6 1299 aaKnown RBP17.95■□□□□ 0.46
ZNF548-212ENST00000602086 NPM2Q86SE8 214 aaKnown RBP17.95■□□□□ 0.46
ZNF548-212ENST00000602086 ISCA1Q9BUE6 129 aa17.95■□□□□ 0.46
ZNF548-212ENST00000602086 PDZRN3Q9UPQ7 1066 aa17.95■□□□□ 0.46
ZNF548-212ENST00000602086 TAF1LQ8IZX4 1826 aa17.95■□□□□ 0.46
ZNF548-212ENST00000602086 NUCB1Q02818 461 aa17.94■□□□□ 0.46
ZNF548-212ENST00000602086 SSH3Q8TE77 659 aa17.94■□□□□ 0.46
ZNF548-212ENST00000602086 NUP98P52948 1817 aa17.93■□□□□ 0.46
ZNF548-212ENST00000602086 A0A087WZG4 1122 aa17.93■□□□□ 0.46
ZNF548-212ENST00000602086 POLA2Q14181 598 aa17.93■□□□□ 0.46
ZNF548-212ENST00000602086 SPON1Q9HCB6 807 aa17.93■□□□□ 0.46
ZNF548-212ENST00000602086 CWC25Q9NXE8 425 aaPredicted RBP17.93■□□□□ 0.46
ZNF548-212ENST00000602086 H7C1W4 665 aa17.92■□□□□ 0.46
ZNF548-212ENST00000602086 LINC00116Q8NCU8 138 aa17.92■□□□□ 0.46
ZNF548-212ENST00000602086 PDGFDQ9GZP0 370 aaPredicted RBP17.92■□□□□ 0.46
ZNF548-212ENST00000602086 ZBTB3Q9H5J0 574 aa17.92■□□□□ 0.46
ZNF548-212ENST00000602086 CASP7P55210 303 aa17.91■□□□□ 0.46
ZNF548-212ENST00000602086 SLC27A3Q5K4L6 730 aa17.91■□□□□ 0.46
ZNF548-212ENST00000602086 DZIP3Q86Y13 1208 aaKnown RBP17.91■□□□□ 0.46
ZNF548-212ENST00000602086 CCNL1Q9UK58 526 aaPredicted RBP17.91■□□□□ 0.46
ZNF548-212ENST00000602086 BCORQ6W2J9 1755 aa17.91■□□□□ 0.46
ZNF548-212ENST00000602086 CHD1LQ86WJ1 897 aa17.9■□□□□ 0.46
ZNF548-212ENST00000602086 PNMA6EA0A0J9YXQ4 647 aa17.89■□□□□ 0.45
ZNF548-212ENST00000602086 RPS6KA4O75676 772 aa17.89■□□□□ 0.45
ZNF548-212ENST00000602086 PPP1R42Q7Z4L9 355 aa17.89■□□□□ 0.45
ZNF548-212ENST00000602086 KAZALD1Q96I82 304 aa17.89■□□□□ 0.45
ZNF548-212ENST00000602086 ATP5J2-PTCD1G3V325 749 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms