RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 PSMA5P28066 241 aa13.13□□□□□ -0.31
ZNF558-207ENST00000601372 RPAP2Q8IXW5 612 aaPredicted RBP13.13□□□□□ -0.31
ZNF558-207ENST00000601372 PLEKHG3A1L390 1219 aa13.13□□□□□ -0.31
ZNF558-207ENST00000601372 TRIM37O94972 964 aa13.13□□□□□ -0.31
ZNF558-207ENST00000601372 POLR3DP05423 398 aaPredicted RBP13.13□□□□□ -0.31
ZNF558-207ENST00000601372 TPTE2Q6XPS3 522 aa13.13□□□□□ -0.31
ZNF558-207ENST00000601372 ANKRD18AQ8IVF6 992 aa13.13□□□□□ -0.31
ZNF558-207ENST00000601372 NUCB1Q02818 461 aa13.12□□□□□ -0.31
ZNF558-207ENST00000601372 IQGAP3Q86VI3 1631 aa13.12□□□□□ -0.31
ZNF558-207ENST00000601372 SYCE3A1L190 88 aa13.12□□□□□ -0.31
ZNF558-207ENST00000601372 KIAA0232Q92628 1395 aa13.12□□□□□ -0.31
ZNF558-207ENST00000601372 PES1O00541 588 aaKnown RBP13.12□□□□□ -0.31
ZNF558-207ENST00000601372 FAM182BQ5T319 152 aa13.12□□□□□ -0.31
ZNF558-207ENST00000601372 AIDAQ96BJ3 306 aa13.12□□□□□ -0.31
ZNF558-207ENST00000601372 MCM2P49736 904 aa13.11□□□□□ -0.31
ZNF558-207ENST00000601372 MX1P20591 662 aa13.11□□□□□ -0.31
ZNF558-207ENST00000601372 BRINP3Q76B58 766 aa13.11□□□□□ -0.31
ZNF558-207ENST00000601372 MSL1Q68DK7 614 aa13.11□□□□□ -0.31
ZNF558-207ENST00000601372 JAKMIP1Q96N16 626 aaKnown RBP13.11□□□□□ -0.31
ZNF558-207ENST00000601372 SAFBQ15424 915 aaKnown RBP eCLIP13.11□□□□□ -0.31
ZNF558-207ENST00000601372 CCAR2Q8N163 923 aaKnown RBP13.11□□□□□ -0.31
ZNF558-207ENST00000601372 BRMS1Q9HCU9 246 aa13.11□□□□□ -0.31
ZNF558-207ENST00000601372 DIP2CQ9Y2E4 1556 aa13.1□□□□□ -0.31
ZNF558-207ENST00000601372 UPF3BQ9BZI7 483 aaKnown RBP13.1□□□□□ -0.31
ZNF558-207ENST00000601372 CYP46A1Q9Y6A2 500 aa13.1□□□□□ -0.31
ZNF558-207ENST00000601372 MBD3O95983 291 aa13.1□□□□□ -0.31
ZNF558-207ENST00000601372 CASTP20810 708 aaKnown RBP13.1□□□□□ -0.31
ZNF558-207ENST00000601372 TPD52L1Q16890 204 aaPredicted RBP13.1□□□□□ -0.31
ZNF558-207ENST00000601372 CCDC8Q9H0W5 538 aaPredicted RBP13.1□□□□□ -0.31
ZNF558-207ENST00000601372 PDRG1Q9NUG6 133 aa13.1□□□□□ -0.31
ZNF558-207ENST00000601372 POLR3AO14802 1390 aaPredicted RBP13.1□□□□□ -0.31
ZNF558-207ENST00000601372 KIF1BPQ96EK5 621 aa13.1□□□□□ -0.31
ZNF558-207ENST00000601372 ABCA6Q8N139 1617 aa13.1□□□□□ -0.31
ZNF558-207ENST00000601372 BLMP54132 1417 aaPredicted RBP13.1□□□□□ -0.31
ZNF558-207ENST00000601372 KRT27Q7Z3Y8 459 aa13.09□□□□□ -0.31
ZNF558-207ENST00000601372 SETD1BQ9UPS6 1966 aaKnown RBP13.09□□□□□ -0.31
ZNF558-207ENST00000601372 CLTCL1P53675 1640 aa13.09□□□□□ -0.31
ZNF558-207ENST00000601372 SLF2Q8IX21 1173 aa13.09□□□□□ -0.31
ZNF558-207ENST00000601372 C8orf58Q8NAV2 365 aa13.09□□□□□ -0.31
ZNF558-207ENST00000601372 CIZ1Q9ULV3 898 aaPredicted RBP13.09□□□□□ -0.31
ZNF558-207ENST00000601372 XBP1P17861 261 aa13.09□□□□□ -0.31
ZNF558-207ENST00000601372 KDM2BQ8NHM5 1336 aa13.09□□□□□ -0.31
ZNF558-207ENST00000601372 WDHD1O75717 1129 aaPredicted RBP13.09□□□□□ -0.31
ZNF558-207ENST00000601372 TSPYL6Q8N831 410 aa13.09□□□□□ -0.31
ZNF558-207ENST00000601372 PHACTR3Q96KR7 559 aa13.09□□□□□ -0.31
ZNF558-207ENST00000601372 ADGRB3O60242 1522 aa13.09□□□□□ -0.31
ZNF558-207ENST00000601372 F8W031 263 aaPredicted RBP13.09□□□□□ -0.31
ZNF558-207ENST00000601372 MYO1BO43795 1136 aa13.09□□□□□ -0.31
ZNF558-207ENST00000601372 BOLA2Q9H3K6 86 aa13.09□□□□□ -0.31
ZNF558-207ENST00000601372 PTPRMP28827 1452 aa13.09□□□□□ -0.31
ZNF558-207ENST00000601372 RIMBP2O15034 1052 aa13.08□□□□□ -0.31
ZNF558-207ENST00000601372 MRPL50Q8N5N7 158 aaKnown RBP13.08□□□□□ -0.31
ZNF558-207ENST00000601372 CCDC69A6NI79 296 aa13.08□□□□□ -0.32
ZNF558-207ENST00000601372 RAB11FIP3O75154 756 aa13.08□□□□□ -0.32
ZNF558-207ENST00000601372 LRRIQ1Q96JM4 1722 aa13.08□□□□□ -0.32
ZNF558-207ENST00000601372 RBM27Q9P2N5 1060 aaKnown RBP13.08□□□□□ -0.32
ZNF558-207ENST00000601372 HDAC1Q13547 482 aaPredicted RBP13.08□□□□□ -0.32
ZNF558-207ENST00000601372 UNC5CLQ8IV45 518 aa13.08□□□□□ -0.32
ZNF558-207ENST00000601372 CNBD1Q8NA66 436 aa13.08□□□□□ -0.32
ZNF558-207ENST00000601372 NUP133Q8WUM0 1156 aa13.08□□□□□ -0.32
ZNF558-207ENST00000601372 GLI2P10070 1586 aa13.08□□□□□ -0.32
ZNF558-207ENST00000601372 ARHGEF40Q8TER5 1519 aa13.08□□□□□ -0.32
ZNF558-207ENST00000601372 RBM17Q96I25 401 aaKnown RBP13.08□□□□□ -0.32
ZNF558-207ENST00000601372 CCDC73Q6ZRK6 1079 aa13.08□□□□□ -0.32
ZNF558-207ENST00000601372 SLC52A2Q9HAB3 445 aa13.08□□□□□ -0.32
ZNF558-207ENST00000601372 FER1L4A9Z1Z3 1794 aa13.08□□□□□ -0.32
ZNF558-207ENST00000601372 MINDY4BA8MYZ0 360 aa13.07□□□□□ -0.32
ZNF558-207ENST00000601372 LGR6Q9HBX8 967 aa13.07□□□□□ -0.32
ZNF558-207ENST00000601372 WDR33Q9C0J8 1336 aaKnown RBP13.07□□□□□ -0.32
ZNF558-207ENST00000601372 ZNF790Q6PG37 636 aa13.07□□□□□ -0.32
ZNF558-207ENST00000601372 AFF2P51816 1311 aa13.07□□□□□ -0.32
ZNF558-207ENST00000601372 SLC4A8Q2Y0W8 1093 aa13.07□□□□□ -0.32
ZNF558-207ENST00000601372 RNF123Q5XPI4 1314 aa13.07□□□□□ -0.32
ZNF558-207ENST00000601372 MAP3K12Q12852 859 aa13.07□□□□□ -0.32
ZNF558-207ENST00000601372 RBM26Q5T8P6 1007 aaKnown RBP13.07□□□□□ -0.32
ZNF558-207ENST00000601372 TTC22Q5TAA0 569 aa13.07□□□□□ -0.32
ZNF558-207ENST00000601372 IL13P35225 146 aa13.07□□□□□ -0.32
ZNF558-207ENST00000601372 TRIM5Q9C035 493 aa13.07□□□□□ -0.32
ZNF558-207ENST00000601372 LETM1O95202 739 aaPredicted RBP13.07□□□□□ -0.32
ZNF558-207ENST00000601372 CCDC83Q8IWF9 413 aa13.07□□□□□ -0.32
ZNF558-207ENST00000601372 JDP2Q8WYK2 163 aa13.07□□□□□ -0.32
ZNF558-207ENST00000601372 KRT24Q2M2I5 525 aa13.06□□□□□ -0.32
ZNF558-207ENST00000601372 MYOM2P54296 1465 aa13.06□□□□□ -0.32
ZNF558-207ENST00000601372 CAMK4Q16566 473 aa13.06□□□□□ -0.32
ZNF558-207ENST00000601372 BMP2KLQ5H9B9 411 aa13.06□□□□□ -0.32
ZNF558-207ENST00000601372 IL16Q14005 1332 aa13.06□□□□□ -0.32
ZNF558-207ENST00000601372 MKNK2Q9HBH9 465 aa13.06□□□□□ -0.32
ZNF558-207ENST00000601372 PRPF40BQ6NWY9 871 aaKnown RBP13.06□□□□□ -0.32
ZNF558-207ENST00000601372 FAM196AQ6ZSG2 479 aa13.06□□□□□ -0.32
ZNF558-207ENST00000601372 GDPD2Q9HCC8 539 aa13.06□□□□□ -0.32
ZNF558-207ENST00000601372 GJA3Q9Y6H8 435 aa13.06□□□□□ -0.32
ZNF558-207ENST00000601372 ESPNB1AK53 854 aa13.05□□□□□ -0.32
ZNF558-207ENST00000601372 IRS4O14654 1257 aaPredicted RBP13.05□□□□□ -0.32
ZNF558-207ENST00000601372 LARP1BQ659C4 914 aaKnown RBP13.05□□□□□ -0.32
ZNF558-207ENST00000601372 HDAC9Q9UKV0 1011 aa13.05□□□□□ -0.32
ZNF558-207ENST00000601372 RNF17Q9BXT8 1623 aaKnown RBP13.05□□□□□ -0.32
ZNF558-207ENST00000601372 CCDC87Q9NVE4 849 aa13.05□□□□□ -0.32
ZNF558-207ENST00000601372 HOMER1Q86YM7 354 aa13.05□□□□□ -0.32
ZNF558-207ENST00000601372 MEIS3Q99687 375 aa13.05□□□□□ -0.32
ZNF558-207ENST00000601372 ADGRL3Q9HAR2 1447 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms