RNA–Protein interactions for RNA: ENST00000601170.5

SMG9-211, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG9, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-211ENST00000601170 CAMTA1Q9Y6Y1 1673 aa17.46■□□□□ 0.39
SMG9-211ENST00000601170 LMOD2Q6P5Q4 547 aa17.46■□□□□ 0.39
SMG9-211ENST00000601170 ZSCAN30Q86W11 494 aa17.46■□□□□ 0.39
SMG9-211ENST00000601170 PA2G4Q9UQ80 394 aaKnown RBP17.46■□□□□ 0.39
SMG9-211ENST00000601170 RPAP1Q9BWH6 1393 aaPredicted RBP17.45■□□□□ 0.38
SMG9-211ENST00000601170 AK2P54819 239 aa17.45■□□□□ 0.38
SMG9-211ENST00000601170 DIAPH3Q9NSV4 1193 aa17.45■□□□□ 0.38
SMG9-211ENST00000601170 ECHDC1Q9NTX5 307 aa17.45■□□□□ 0.38
SMG9-211ENST00000601170 PDLIM2Q96JY6 352 aa17.44■□□□□ 0.38
SMG9-211ENST00000601170 GDPD2Q9HCC8 539 aa17.44■□□□□ 0.38
SMG9-211ENST00000601170 TCHHQ07283 1943 aa17.44■□□□□ 0.38
SMG9-211ENST00000601170 ERC1Q8IUD2 1116 aa17.44■□□□□ 0.38
SMG9-211ENST00000601170 IFIT2P09913 472 aaKnown RBP17.43■□□□□ 0.38
SMG9-211ENST00000601170 RUFY2Q8WXA3 655 aa17.43■□□□□ 0.38
SMG9-211ENST00000601170 GPATCH3Q96I76 525 aa17.43■□□□□ 0.38
SMG9-211ENST00000601170 LARP6Q9BRS8 491 aaKnown RBP17.43■□□□□ 0.38
SMG9-211ENST00000601170 HYPKQ9NX55 129 aa17.43■□□□□ 0.38
SMG9-211ENST00000601170 AXIN2Q9Y2T1 843 aa17.43■□□□□ 0.38
SMG9-211ENST00000601170 RUFY3Q7L099 469 aa17.43■□□□□ 0.38
SMG9-211ENST00000601170 LIMCH1Q9UPQ0 1083 aa17.43■□□□□ 0.38
SMG9-211ENST00000601170 HDAC5Q9UQL6 1122 aa17.43■□□□□ 0.38
SMG9-211ENST00000601170 RGPD5Q99666 1765 aa17.42■□□□□ 0.38
SMG9-211ENST00000601170 CASTP20810 708 aaKnown RBP17.42■□□□□ 0.38
SMG9-211ENST00000601170 MSNP26038 577 aaKnown RBP17.42■□□□□ 0.38
SMG9-211ENST00000601170 TRPM3Q9HCF6 1732 aaPredicted RBP17.42■□□□□ 0.38
SMG9-211ENST00000601170 ADAMTS7Q9UKP4 1686 aa17.42■□□□□ 0.38
SMG9-211ENST00000601170 GADD45BO75293 160 aaPredicted RBP17.42■□□□□ 0.38
SMG9-211ENST00000601170 CPA1P15085 419 aa17.42■□□□□ 0.38
SMG9-211ENST00000601170 PTH1RQ03431 593 aa17.42■□□□□ 0.38
SMG9-211ENST00000601170 LINS1Q8NG48 757 aa17.42■□□□□ 0.38
SMG9-211ENST00000601170 SYAP1Q96A49 352 aaPredicted RBP17.42■□□□□ 0.38
SMG9-211ENST00000601170 SUCLG2Q96I99 432 aa17.42■□□□□ 0.38
SMG9-211ENST00000601170 GRM8O00222 908 aa17.41■□□□□ 0.38
SMG9-211ENST00000601170 HS1BP3Q53T59 392 aa17.41■□□□□ 0.38
SMG9-211ENST00000601170 USP48Q86UV5 1035 aa17.41■□□□□ 0.38
SMG9-211ENST00000601170 AACSQ86V21 672 aa17.41■□□□□ 0.38
SMG9-211ENST00000601170 AIMP1Q12904 312 aaKnown RBP17.4■□□□□ 0.38
SMG9-211ENST00000601170 KAZALD1Q96I82 304 aa17.4■□□□□ 0.38
SMG9-211ENST00000601170 DDX21Q9NR30 783 aaKnown RBP eCLIP17.4■□□□□ 0.38
SMG9-211ENST00000601170 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.4■□□□□ 0.38
SMG9-211ENST00000601170 DDX58O95786 925 aaKnown RBP17.4■□□□□ 0.38
SMG9-211ENST00000601170 RNF214Q8ND24 703 aa17.4■□□□□ 0.38
SMG9-211ENST00000601170 EVI5LQ96CN4 794 aa17.4■□□□□ 0.38
SMG9-211ENST00000601170 BICC1Q9H694 974 aaKnown RBP17.4■□□□□ 0.38
SMG9-211ENST00000601170 ZSCAN22P10073 491 aaPredicted RBP17.39■□□□□ 0.38
SMG9-211ENST00000601170 PRPF40BQ6NWY9 871 aaKnown RBP17.39■□□□□ 0.38
SMG9-211ENST00000601170 UTYO14607 1347 aa17.39■□□□□ 0.37
SMG9-211ENST00000601170 NPHP4O75161 1426 aaPredicted RBP17.39■□□□□ 0.37
SMG9-211ENST00000601170 SASH1O94885 1247 aa17.39■□□□□ 0.37
SMG9-211ENST00000601170 LARGE1O95461 756 aa17.39■□□□□ 0.37
SMG9-211ENST00000601170 ADCK5Q3MIX3 580 aa17.39■□□□□ 0.37
SMG9-211ENST00000601170 SMC3Q9UQE7 1217 aa17.39■□□□□ 0.37
SMG9-211ENST00000601170 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.39■□□□□ 0.37
SMG9-211ENST00000601170 LMTK3Q96Q04 1460 aa17.39■□□□□ 0.37
SMG9-211ENST00000601170 C5P01031 1676 aa17.38■□□□□ 0.37
SMG9-211ENST00000601170 STX6O43752 255 aa17.38■□□□□ 0.37
SMG9-211ENST00000601170 SYT1P21579 422 aa17.38■□□□□ 0.37
SMG9-211ENST00000601170 PDIA6Q15084 440 aa17.38■□□□□ 0.37
SMG9-211ENST00000601170 TMEM87AQ8NBN3 555 aa17.38■□□□□ 0.37
SMG9-211ENST00000601170 JAKMIP1Q96N16 626 aaKnown RBP17.38■□□□□ 0.37
SMG9-211ENST00000601170 TSPY26PQ9H489 355 aa17.38■□□□□ 0.37
SMG9-211ENST00000601170 ERBB3P21860 1342 aa17.37■□□□□ 0.37
SMG9-211ENST00000601170 G3BP1Q13283 466 aaKnown RBP eCLIP17.37■□□□□ 0.37
SMG9-211ENST00000601170 KRT28Q7Z3Y7 464 aa17.37■□□□□ 0.37
SMG9-211ENST00000601170 EAF2Q96CJ1 260 aaPredicted RBP17.37■□□□□ 0.37
SMG9-211ENST00000601170 PDRG1Q9NUG6 133 aa17.37■□□□□ 0.37
SMG9-211ENST00000601170 NOL7Q9UMY1 257 aaKnown RBP17.37■□□□□ 0.37
SMG9-211ENST00000601170 CNPY2Q9Y2B0 182 aa17.37■□□□□ 0.37
SMG9-211ENST00000601170 CCDC171Q6TFL3 1326 aa17.37■□□□□ 0.37
SMG9-211ENST00000601170 PHF14O94880 888 aa17.37■□□□□ 0.37
SMG9-211ENST00000601170 SLC39A6Q13433 755 aa17.37■□□□□ 0.37
SMG9-211ENST00000601170 VPS53Q5VIR6 699 aa17.37■□□□□ 0.37
SMG9-211ENST00000601170 KCNB2Q92953 911 aa17.37■□□□□ 0.37
SMG9-211ENST00000601170 CCDC8Q9H0W5 538 aaPredicted RBP17.37■□□□□ 0.37
SMG9-211ENST00000601170 IGKV5-2P06315 115 aa17.36■□□□□ 0.37
SMG9-211ENST00000601170 RIC3Q7Z5B4 369 aa17.36■□□□□ 0.37
SMG9-211ENST00000601170 CCDC83Q8IWF9 413 aa17.36■□□□□ 0.37
SMG9-211ENST00000601170 TM6SF1Q9BZW5 370 aa17.36■□□□□ 0.37
SMG9-211ENST00000601170 ZSWIM6Q9HCJ5 1215 aa17.36■□□□□ 0.37
SMG9-211ENST00000601170 SCN11AQ9UI33 1791 aa17.36■□□□□ 0.37
SMG9-211ENST00000601170 F13A1P00488 732 aa17.36■□□□□ 0.37
SMG9-211ENST00000601170 NECTIN1Q15223 517 aa17.36■□□□□ 0.37
SMG9-211ENST00000601170 ZNF790Q6PG37 636 aa17.36■□□□□ 0.37
SMG9-211ENST00000601170 FAM227BQ96M60 508 aa17.36■□□□□ 0.37
SMG9-211ENST00000601170 CYP46A1Q9Y6A2 500 aa17.36■□□□□ 0.37
SMG9-211ENST00000601170 SIL1Q9H173 461 aa17.35■□□□□ 0.37
SMG9-211ENST00000601170 TLR7Q9NYK1 1049 aaKnown RBP17.35■□□□□ 0.37
SMG9-211ENST00000601170 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.35■□□□□ 0.37
SMG9-211ENST00000601170 KIF1AQ12756 1690 aa17.35■□□□□ 0.37
SMG9-211ENST00000601170 MYL6BP14649 208 aa17.35■□□□□ 0.37
SMG9-211ENST00000601170 GJB2P29033 226 aa17.35■□□□□ 0.37
SMG9-211ENST00000601170 ZC3H6P61129 1189 aaKnown RBP17.35■□□□□ 0.37
SMG9-211ENST00000601170 NMIQ13287 307 aaPredicted RBP17.35■□□□□ 0.37
SMG9-211ENST00000601170 RBM8AQ9Y5S9 174 aaKnown RBP17.35■□□□□ 0.37
SMG9-211ENST00000601170 KDM6AO15550 1401 aaPredicted RBP17.34■□□□□ 0.37
SMG9-211ENST00000601170 ZKSCAN1P17029 563 aaPredicted RBP17.34■□□□□ 0.37
SMG9-211ENST00000601170 LARP1Q6PKG0 1096 aaKnown RBP17.34■□□□□ 0.37
SMG9-211ENST00000601170 ZSCAN31Q96LW9 406 aaPredicted RBP17.34■□□□□ 0.37
SMG9-211ENST00000601170 HIP1O00291 1037 aa17.33■□□□□ 0.37
SMG9-211ENST00000601170 KLHDC4Q8TBB5 520 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms