RNA–Protein interactions for RNA: ENST00000600528.1

COPE-210, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 261 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-210ENST00000600528 SETDB2Q96T68 719 aa12.66□□□□□ -0.38
COPE-210ENST00000600528 SCN4AP35499 1836 aa12.65□□□□□ -0.38
COPE-210ENST00000600528 SLX4Q8IY92 1834 aa12.65□□□□□ -0.38
COPE-210ENST00000600528 KLRG2A4D1S0 409 aaPredicted RBP12.65□□□□□ -0.38
COPE-210ENST00000600528 RASSF10A6NK89 507 aa12.65□□□□□ -0.38
COPE-210ENST00000600528 CAMTA2O94983 1202 aa12.65□□□□□ -0.38
COPE-210ENST00000600528 AMER1Q5JTC6 1135 aaPredicted RBP12.65□□□□□ -0.38
COPE-210ENST00000600528 ZNF790Q6PG37 636 aa12.65□□□□□ -0.38
COPE-210ENST00000600528 CNBD1Q8NA66 436 aa12.65□□□□□ -0.38
COPE-210ENST00000600528 KNSTRNQ9Y448 316 aa12.65□□□□□ -0.38
COPE-210ENST00000600528 SCN7AQ01118 1682 aa12.64□□□□□ -0.39
COPE-210ENST00000600528 LBX1P52954 281 aa12.64□□□□□ -0.39
COPE-210ENST00000600528 IL17REQ8NFR9 667 aa12.64□□□□□ -0.39
COPE-210ENST00000600528 VIRMAQ69YN4 1812 aaKnown RBP12.63□□□□□ -0.39
COPE-210ENST00000600528 A1BGP04217 495 aa12.63□□□□□ -0.39
COPE-210ENST00000600528 ST5P78524 1137 aa12.63□□□□□ -0.39
COPE-210ENST00000600528 HACL1Q9UJ83 578 aa12.63□□□□□ -0.39
COPE-210ENST00000600528 ADAMTSL1Q8N6G6 1762 aa12.62□□□□□ -0.39
COPE-210ENST00000600528 ARFGEF2Q9Y6D5 1785 aa12.62□□□□□ -0.39
COPE-210ENST00000600528 DIAPH1O60610 1272 aaKnown RBP12.62□□□□□ -0.39
COPE-210ENST00000600528 HSPA8P11142 646 aaKnown RBP12.62□□□□□ -0.39
COPE-210ENST00000600528 EPHX2P34913 555 aa12.62□□□□□ -0.39
COPE-210ENST00000600528 FKBP4Q02790 459 aaKnown RBP eCLIP12.62□□□□□ -0.39
COPE-210ENST00000600528 DEFB115Q30KQ5 88 aa12.62□□□□□ -0.39
COPE-210ENST00000600528 CCDC93Q567U6 631 aa12.62□□□□□ -0.39
COPE-210ENST00000600528 CLEC4GQ6UXB4 293 aa12.62□□□□□ -0.39
COPE-210ENST00000600528 PNMA8AQ86V59 439 aaPredicted RBP12.62□□□□□ -0.39
COPE-210ENST00000600528 ABHD8Q96I13 439 aa12.62□□□□□ -0.39
COPE-210ENST00000600528 ZNF541Q9H0D2 1346 aa12.62□□□□□ -0.39
COPE-210ENST00000600528 FZD9O00144 591 aa12.61□□□□□ -0.39
COPE-210ENST00000600528 NPR1P16066 1061 aa12.61□□□□□ -0.39
COPE-210ENST00000600528 MAP2K1Q02750 393 aaPredicted RBP12.61□□□□□ -0.39
COPE-210ENST00000600528 TEFQ10587 303 aa12.61□□□□□ -0.39
COPE-210ENST00000600528 CNTROBQ8N137 903 aa12.61□□□□□ -0.39
COPE-210ENST00000600528 FMNL2Q96PY5 1086 aa12.61□□□□□ -0.39
COPE-210ENST00000600528 ZNF330Q9Y3S2 320 aaPredicted RBP12.61□□□□□ -0.39
COPE-210ENST00000600528 WDR33Q9C0J8 1336 aaKnown RBP12.61□□□□□ -0.39
COPE-210ENST00000600528 GNAT3A8MTJ3 354 aa12.6□□□□□ -0.39
COPE-210ENST00000600528 RGL2O15211 777 aa12.6□□□□□ -0.39
COPE-210ENST00000600528 EAPPQ56P03 285 aaPredicted RBP12.6□□□□□ -0.39
COPE-210ENST00000600528 DZIP3Q86Y13 1208 aaKnown RBP12.6□□□□□ -0.39
COPE-210ENST00000600528 RTKN2Q8IZC4 609 aa12.6□□□□□ -0.39
COPE-210ENST00000600528 KIF7Q2M1P5 1343 aa12.6□□□□□ -0.39
COPE-210ENST00000600528 CEMIPQ8WUJ3 1361 aa12.59□□□□□ -0.39
COPE-210ENST00000600528 NPHP1O15259 732 aa12.59□□□□□ -0.39
COPE-210ENST00000600528 RGS19P49795 217 aa12.59□□□□□ -0.39
COPE-210ENST00000600528 NPM2Q86SE8 214 aaKnown RBP12.59□□□□□ -0.39
COPE-210ENST00000600528 NBPF5PQ86XG9 351 aaPredicted RBP12.59□□□□□ -0.39
COPE-210ENST00000600528 GAS2L2Q8NHY3 880 aa12.59□□□□□ -0.39
COPE-210ENST00000600528 ZNF277Q9NRM2 450 aaPredicted RBP12.59□□□□□ -0.39
COPE-210ENST00000600528 CLEC11AQ9Y240 323 aa12.59□□□□□ -0.39
COPE-210ENST00000600528 PER1O15534 1290 aaPredicted RBP12.58□□□□□ -0.4
COPE-210ENST00000600528 KCNQ3O43525 872 aa12.58□□□□□ -0.4
COPE-210ENST00000600528 IARSP41252 1262 aaKnown RBP12.58□□□□□ -0.4
COPE-210ENST00000600528 FAM161AQ3B820 660 aa12.58□□□□□ -0.4
COPE-210ENST00000600528 MAP1SQ66K74 1059 aaPredicted RBP12.58□□□□□ -0.4
COPE-210ENST00000600528 TPTE2Q6XPS3 522 aa12.58□□□□□ -0.4
COPE-210ENST00000600528 GPC2Q8N158 579 aa12.58□□□□□ -0.4
COPE-210ENST00000600528 SNED1Q8TER0 1413 aa12.58□□□□□ -0.4
COPE-210ENST00000600528 USP16Q9Y5T5 823 aa12.58□□□□□ -0.4
COPE-210ENST00000600528 SIPA1L3O60292 1781 aaPredicted RBP12.58□□□□□ -0.4
COPE-210ENST00000600528 RNF123Q5XPI4 1314 aa12.58□□□□□ -0.4
COPE-210ENST00000600528 BCORQ6W2J9 1755 aa12.57□□□□□ -0.4
COPE-210ENST00000600528 ALDH1B1P30837 517 aa12.57□□□□□ -0.4
COPE-210ENST00000600528 OLFM4Q6UX06 510 aa12.57□□□□□ -0.4
COPE-210ENST00000600528 SYNE4Q8N205 404 aa12.57□□□□□ -0.4
COPE-210ENST00000600528 PSMD1Q99460 953 aa12.57□□□□□ -0.4
COPE-210ENST00000600528 DDX21Q9NR30 783 aaKnown RBP eCLIP12.57□□□□□ -0.4
COPE-210ENST00000600528 ZNF316A6NFI3 1004 aaPredicted RBP12.56□□□□□ -0.4
COPE-210ENST00000600528 BTBD11A6QL63 1104 aa12.56□□□□□ -0.4
COPE-210ENST00000600528 ZNF652Q9Y2D9 606 aa12.56□□□□□ -0.4
COPE-210ENST00000600528 CACNA1SQ13698 1873 aa12.55□□□□□ -0.4
COPE-210ENST00000600528 COL3A1P02461 1466 aaPredicted RBP12.55□□□□□ -0.4
COPE-210ENST00000600528 ABT1Q9ULW3 272 aaKnown RBP12.55□□□□□ -0.4
COPE-210ENST00000600528 NPC1L1Q9UHC9 1359 aa12.55□□□□□ -0.4
COPE-210ENST00000600528 PRAMEF22A3QJZ6 481 aa12.54□□□□□ -0.4
COPE-210ENST00000600528 NBPF26B4DH59 902 aa12.54□□□□□ -0.4
COPE-210ENST00000600528 SNRPA1P09661 255 aaKnown RBP12.54□□□□□ -0.4
COPE-210ENST00000600528 ECE1P42892 770 aa12.54□□□□□ -0.4
COPE-210ENST00000600528 PIP4K2AP48426 406 aaPredicted RBP12.54□□□□□ -0.4
COPE-210ENST00000600528 MLLT1Q03111 559 aaPredicted RBP12.54□□□□□ -0.4
COPE-210ENST00000600528 CRY2Q49AN0 593 aa12.54□□□□□ -0.4
COPE-210ENST00000600528 CC2D2BQ6DHV5 1058 aa12.54□□□□□ -0.4
COPE-210ENST00000600528 NBPF10Q6P3W6 841 aaKnown RBP12.54□□□□□ -0.4
COPE-210ENST00000600528 NBPF15Q8N660 670 aa12.54□□□□□ -0.4
COPE-210ENST00000600528 JDP2Q8WYK2 163 aa12.54□□□□□ -0.4
COPE-210ENST00000600528 CAPNS2Q96L46 248 aa12.54□□□□□ -0.4
COPE-210ENST00000600528 PCDH10Q9P2E7 1040 aa12.54□□□□□ -0.4
COPE-210ENST00000600528 NIP7Q9Y221 180 aaKnown RBP eCLIP12.54□□□□□ -0.4
COPE-210ENST00000600528 THSD7BQ9C0I4 1608 aa12.54□□□□□ -0.4
COPE-210ENST00000600528 SCNN1DP51172 638 aa12.53□□□□□ -0.4
COPE-210ENST00000600528 CST9Q5W186 159 aa12.53□□□□□ -0.4
COPE-210ENST00000600528 PHACTR3Q96KR7 559 aa12.53□□□□□ -0.4
COPE-210ENST00000600528 GPR101Q96P66 508 aaPredicted RBP12.53□□□□□ -0.4
COPE-210ENST00000600528 U2SURPO15042 1029 aaKnown RBP12.52□□□□□ -0.41
COPE-210ENST00000600528 MAP2K2P36507 400 aa12.52□□□□□ -0.41
COPE-210ENST00000600528 EIF6P56537 245 aaKnown RBP12.52□□□□□ -0.41
COPE-210ENST00000600528 FMR1Q06787 632 aaKnown RBP eCLIP12.52□□□□□ -0.41
COPE-210ENST00000600528 GRIPAP1Q4V328 841 aa12.52□□□□□ -0.41
COPE-210ENST00000600528 USP50Q70EL3 339 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms