RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 CEP170Q5SW79 1584 aa11.51□□□□□ -0.57
NFKB1-212ENST00000600343 NF2P35240 595 aa11.51□□□□□ -0.57
NFKB1-212ENST00000600343 FBXW10Q5XX13 1052 aa11.51□□□□□ -0.57
NFKB1-212ENST00000600343 KCNV1Q6PIU1 500 aa11.51□□□□□ -0.57
NFKB1-212ENST00000600343 LRRC31Q6UY01 552 aa11.51□□□□□ -0.57
NFKB1-212ENST00000600343 CAND2O75155 1236 aa11.51□□□□□ -0.57
NFKB1-212ENST00000600343 FUT8Q9BYC5 575 aa11.51□□□□□ -0.57
NFKB1-212ENST00000600343 IPO8O15397 1037 aaKnown RBP11.5□□□□□ -0.57
NFKB1-212ENST00000600343 GCFC2P16383 781 aaKnown RBP11.5□□□□□ -0.57
NFKB1-212ENST00000600343 EVCP57679 992 aa11.5□□□□□ -0.57
NFKB1-212ENST00000600343 CCZ1BP86790 482 aa11.5□□□□□ -0.57
NFKB1-212ENST00000600343 CCZ1P86791 482 aaPredicted RBP11.5□□□□□ -0.57
NFKB1-212ENST00000600343 GNL2Q13823 731 aaKnown RBP11.5□□□□□ -0.57
NFKB1-212ENST00000600343 CAMK4Q16566 473 aa11.5□□□□□ -0.57
NFKB1-212ENST00000600343 TTC22Q5TAA0 569 aa11.5□□□□□ -0.57
NFKB1-212ENST00000600343 CTCFLQ8NI51 663 aaPredicted RBP11.5□□□□□ -0.57
NFKB1-212ENST00000600343 TRIM6Q9C030 488 aaPredicted RBP11.5□□□□□ -0.57
NFKB1-212ENST00000600343 ANKRD33BA6NCL7 494 aa11.5□□□□□ -0.57
NFKB1-212ENST00000600343 EFCAB8A8MWE9 144 aa11.5□□□□□ -0.57
NFKB1-212ENST00000600343 TADA3O75528 432 aa11.5□□□□□ -0.57
NFKB1-212ENST00000600343 CT47B1P0C2W7 299 aaPredicted RBP11.5□□□□□ -0.57
NFKB1-212ENST00000600343 RDXP35241 583 aaKnown RBP11.5□□□□□ -0.57
NFKB1-212ENST00000600343 CCDC27Q2M243 656 aa11.5□□□□□ -0.57
NFKB1-212ENST00000600343 TDRD7Q8NHU6 1098 aaKnown RBP11.5□□□□□ -0.57
NFKB1-212ENST00000600343 NUP62CLQ9H1M0 184 aa11.5□□□□□ -0.57
NFKB1-212ENST00000600343 EPC1Q9H2F5 836 aa11.5□□□□□ -0.57
NFKB1-212ENST00000600343 PPFIA4O75335 1185 aa11.5□□□□□ -0.57
NFKB1-212ENST00000600343 DNMT1P26358 1616 aaKnown RBP11.49□□□□□ -0.57
NFKB1-212ENST00000600343 SCRN1Q12765 414 aa11.49□□□□□ -0.57
NFKB1-212ENST00000600343 HOMER1Q86YM7 354 aa11.49□□□□□ -0.57
NFKB1-212ENST00000600343 PPIP5K1Q6PFW1 1433 aa11.49□□□□□ -0.57
NFKB1-212ENST00000600343 SRGAP3O43295 1099 aa11.49□□□□□ -0.57
NFKB1-212ENST00000600343 PLEKHM2Q8IWE5 1019 aa11.49□□□□□ -0.57
NFKB1-212ENST00000600343 DDX11Q96FC9 970 aa11.49□□□□□ -0.57
NFKB1-212ENST00000600343 C1orf115Q9H7X2 142 aa11.49□□□□□ -0.57
NFKB1-212ENST00000600343 ATP6V1DQ9Y5K8 247 aa11.49□□□□□ -0.57
NFKB1-212ENST00000600343 ZSCAN22P10073 491 aaPredicted RBP11.49□□□□□ -0.57
NFKB1-212ENST00000600343 ADCY2Q08462 1091 aa11.49□□□□□ -0.57
NFKB1-212ENST00000600343 CARD6Q9BX69 1037 aa11.49□□□□□ -0.57
NFKB1-212ENST00000600343 A1CFQ9NQ94 594 aaKnown RBP11.49□□□□□ -0.57
NFKB1-212ENST00000600343 KCND1Q9NSA2 647 aa11.49□□□□□ -0.57
NFKB1-212ENST00000600343 CPSF2Q9P2I0 782 aaKnown RBP11.49□□□□□ -0.57
NFKB1-212ENST00000600343 ECM2O94769 699 aaPredicted RBP11.48□□□□□ -0.57
NFKB1-212ENST00000600343 SKIDA1Q1XH10 827 aa11.48□□□□□ -0.57
NFKB1-212ENST00000600343 CKAP2LQ8IYA6 745 aa11.48□□□□□ -0.57
NFKB1-212ENST00000600343 TSR2Q969E8 191 aaKnown RBP11.48□□□□□ -0.57
NFKB1-212ENST00000600343 PHF23Q9BUL5 403 aaPredicted RBP11.48□□□□□ -0.57
NFKB1-212ENST00000600343 PDE11AQ9HCR9 933 aa11.48□□□□□ -0.57
NFKB1-212ENST00000600343 TRAK1Q9UPV9 953 aa11.48□□□□□ -0.57
NFKB1-212ENST00000600343 CHMP3Q9Y3E7 222 aa11.48□□□□□ -0.57
NFKB1-212ENST00000600343 ANAPC15P60006 121 aa11.48□□□□□ -0.57
NFKB1-212ENST00000600343 EXOSC9Q06265 439 aaKnown RBP11.48□□□□□ -0.57
NFKB1-212ENST00000600343 TBC1D8BQ0IIM8 1120 aa11.48□□□□□ -0.57
NFKB1-212ENST00000600343 PPP1R13BQ96KQ4 1090 aa11.48□□□□□ -0.57
NFKB1-212ENST00000600343 GPR161Q8N6U8 529 aaKnown RBP11.48□□□□□ -0.57
NFKB1-212ENST00000600343 TATDN2Q93075 761 aa11.48□□□□□ -0.57
NFKB1-212ENST00000600343 MCM8Q9UJA3 840 aa11.48□□□□□ -0.57
NFKB1-212ENST00000600343 AKAP2Q9Y2D5 859 aa11.48□□□□□ -0.57
NFKB1-212ENST00000600343 RPS6KL1Q9Y6S9 549 aa11.48□□□□□ -0.57
NFKB1-212ENST00000600343 URI1O94763 535 aaPredicted RBP11.47□□□□□ -0.57
NFKB1-212ENST00000600343 GPTP24298 496 aa11.47□□□□□ -0.57
NFKB1-212ENST00000600343 ZNF165P49910 485 aa11.47□□□□□ -0.57
NFKB1-212ENST00000600343 DNAI1Q9UI46 699 aa11.47□□□□□ -0.57
NFKB1-212ENST00000600343 FAN1Q9Y2M0 1017 aa11.47□□□□□ -0.57
NFKB1-212ENST00000600343 PRDM15P57071 1507 aaPredicted RBP11.47□□□□□ -0.57
NFKB1-212ENST00000600343 ERC2O15083 957 aa11.47□□□□□ -0.57
NFKB1-212ENST00000600343 TUBB4AP04350 444 aa11.47□□□□□ -0.57
NFKB1-212ENST00000600343 LONRF2Q1L5Z9 754 aa11.47□□□□□ -0.57
NFKB1-212ENST00000600343 SH3GL3Q99963 347 aa11.47□□□□□ -0.57
NFKB1-212ENST00000600343 GOLGA6L19H0YKK7 550 aa11.47□□□□□ -0.57
NFKB1-212ENST00000600343 APOBRQ0VD83 1088 aa11.47□□□□□ -0.57
NFKB1-212ENST00000600343 TNMDQ9H2S6 317 aa11.47□□□□□ -0.57
NFKB1-212ENST00000600343 USP16Q9Y5T5 823 aa11.47□□□□□ -0.57
NFKB1-212ENST00000600343 ZNF644Q9H582 1327 aaPredicted RBP11.46□□□□□ -0.57
NFKB1-212ENST00000600343 MCM6Q14566 821 aa11.46□□□□□ -0.57
NFKB1-212ENST00000600343 BICC1Q9H694 974 aaKnown RBP11.46□□□□□ -0.57
NFKB1-212ENST00000600343 SPATS2LQ9NUQ6 558 aaKnown RBP11.46□□□□□ -0.57
NFKB1-212ENST00000600343 CNNM3Q8NE01 707 aa11.46□□□□□ -0.57
NFKB1-212ENST00000600343 ATAD2BQ9ULI0 1458 aa11.46□□□□□ -0.57
NFKB1-212ENST00000600343 EIF3JO75822 258 aaKnown RBP11.46□□□□□ -0.58
NFKB1-212ENST00000600343 CCNHP51946 323 aaPredicted RBP11.46□□□□□ -0.58
NFKB1-212ENST00000600343 CRYMQ14894 314 aa11.46□□□□□ -0.58
NFKB1-212ENST00000600343 LRRFIP1Q32MZ4 808 aaKnown RBP11.46□□□□□ -0.58
NFKB1-212ENST00000600343 MRFAP1L1Q96HT8 127 aa11.46□□□□□ -0.58
NFKB1-212ENST00000600343 F13A1P00488 732 aa11.45□□□□□ -0.58
NFKB1-212ENST00000600343 SDSP20132 328 aa11.45□□□□□ -0.58
NFKB1-212ENST00000600343 E4F1Q66K89 784 aaPredicted RBP11.45□□□□□ -0.58
NFKB1-212ENST00000600343 PIK3R5Q8WYR1 880 aa11.45□□□□□ -0.58
NFKB1-212ENST00000600343 ERCC4Q92889 916 aaPredicted RBP11.45□□□□□ -0.58
NFKB1-212ENST00000600343 DNAJC25Q9H1X3 360 aa11.45□□□□□ -0.58
NFKB1-212ENST00000600343 ODF2LQ9ULJ1 636 aa11.45□□□□□ -0.58
NFKB1-212ENST00000600343 CLTCL1P53675 1640 aa11.45□□□□□ -0.58
NFKB1-212ENST00000600343 NUP155O75694 1391 aa11.45□□□□□ -0.58
NFKB1-212ENST00000600343 ZNF483Q8TF39 744 aaPredicted RBP11.45□□□□□ -0.58
NFKB1-212ENST00000600343 THOC1Q96FV9 657 aaKnown RBP11.45□□□□□ -0.58
NFKB1-212ENST00000600343 PARD6BQ9BYG5 372 aa11.45□□□□□ -0.58
NFKB1-212ENST00000600343 ERCC6Q03468 1493 aa11.45□□□□□ -0.58
NFKB1-212ENST00000600343 CABS1Q96KC9 395 aa11.45□□□□□ -0.58
NFKB1-212ENST00000600343 STX6O43752 255 aa11.44□□□□□ -0.58
NFKB1-212ENST00000600343 HMGB1P09429 215 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms