RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 NUCB2P80303 420 aa13.97□□□□□ -0.17
ARHGEF1-220ENST00000600274 TCEANC2Q96MN5 208 aa13.97□□□□□ -0.17
ARHGEF1-220ENST00000600274 HSP90AB4PQ58FF6 505 aa13.96□□□□□ -0.17
ARHGEF1-220ENST00000600274 GPATCH3Q96I76 525 aa13.96□□□□□ -0.17
ARHGEF1-220ENST00000600274 DDX21Q9NR30 783 aaKnown RBP eCLIP13.96□□□□□ -0.17
ARHGEF1-220ENST00000600274 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.96□□□□□ -0.17
ARHGEF1-220ENST00000600274 PRPF40BQ6NWY9 871 aaKnown RBP13.96□□□□□ -0.17
ARHGEF1-220ENST00000600274 ZBTB3Q9H5J0 574 aa13.96□□□□□ -0.17
ARHGEF1-220ENST00000600274 PODXL2Q9NZ53 605 aa13.96□□□□□ -0.17
ARHGEF1-220ENST00000600274 TAOK2Q9UL54 1235 aa13.96□□□□□ -0.17
ARHGEF1-220ENST00000600274 CYP27B1O15528 508 aa13.96□□□□□ -0.18
ARHGEF1-220ENST00000600274 GAS2L3Q86XJ1 694 aa13.96□□□□□ -0.18
ARHGEF1-220ENST00000600274 LINS1Q8NG48 757 aa13.96□□□□□ -0.18
ARHGEF1-220ENST00000600274 DNAJC2Q99543 621 aaKnown RBP13.96□□□□□ -0.18
ARHGEF1-220ENST00000600274 FSD1Q9BTV5 496 aa13.96□□□□□ -0.18
ARHGEF1-220ENST00000600274 C1orf167Q5SNV9 1468 aa13.96□□□□□ -0.18
ARHGEF1-220ENST00000600274 DDIT3P35638 169 aa13.95□□□□□ -0.18
ARHGEF1-220ENST00000600274 CADPS2Q86UW7 1296 aa13.95□□□□□ -0.18
ARHGEF1-220ENST00000600274 ANP32BQ92688 251 aaKnown RBP13.95□□□□□ -0.18
ARHGEF1-220ENST00000600274 GRPEL1Q9HAV7 217 aa13.95□□□□□ -0.18
ARHGEF1-220ENST00000600274 ANKRD13DQ6ZTN6 518 aa13.95□□□□□ -0.18
ARHGEF1-220ENST00000600274 PI4K2BQ8TCG2 481 aa13.95□□□□□ -0.18
ARHGEF1-220ENST00000600274 HOXB7P09629 217 aa13.95□□□□□ -0.18
ARHGEF1-220ENST00000600274 CASTP20810 708 aaKnown RBP13.95□□□□□ -0.18
ARHGEF1-220ENST00000600274 POLA2Q14181 598 aa13.95□□□□□ -0.18
ARHGEF1-220ENST00000600274 NEUROD6Q96NK8 337 aa13.95□□□□□ -0.18
ARHGEF1-220ENST00000600274 ECHDC1Q9NTX5 307 aa13.95□□□□□ -0.18
ARHGEF1-220ENST00000600274 A0A087WZG4 1122 aa13.94□□□□□ -0.18
ARHGEF1-220ENST00000600274 GLRX3O76003 335 aaKnown RBP13.94□□□□□ -0.18
ARHGEF1-220ENST00000600274 EPHA10Q5JZY3 1008 aa13.94□□□□□ -0.18
ARHGEF1-220ENST00000600274 LARP1Q6PKG0 1096 aaKnown RBP13.94□□□□□ -0.18
ARHGEF1-220ENST00000600274 SYTL4Q96C24 671 aaPredicted RBP13.94□□□□□ -0.18
ARHGEF1-220ENST00000600274 SALL3Q9BXA9 1300 aa13.94□□□□□ -0.18
ARHGEF1-220ENST00000600274 IGKV5-2P06315 115 aa13.94□□□□□ -0.18
ARHGEF1-220ENST00000600274 RASEFQ8IZ41 740 aa13.94□□□□□ -0.18
ARHGEF1-220ENST00000600274 FAM227BQ96M60 508 aa13.94□□□□□ -0.18
ARHGEF1-220ENST00000600274 LTN1O94822 1766 aa13.94□□□□□ -0.18
ARHGEF1-220ENST00000600274 EAF2Q96CJ1 260 aaPredicted RBP13.93□□□□□ -0.18
ARHGEF1-220ENST00000600274 JAKMIP1Q96N16 626 aaKnown RBP13.93□□□□□ -0.18
ARHGEF1-220ENST00000600274 STAP2Q9UGK3 403 aa13.93□□□□□ -0.18
ARHGEF1-220ENST00000600274 HSP90AA2PQ14568 343 aaPredicted RBP13.93□□□□□ -0.18
ARHGEF1-220ENST00000600274 RGPD2P0DJD1 1756 aa13.93□□□□□ -0.18
ARHGEF1-220ENST00000600274 NFAT5O94916 1531 aa13.92□□□□□ -0.18
ARHGEF1-220ENST00000600274 A1BGP04217 495 aa13.92□□□□□ -0.18
ARHGEF1-220ENST00000600274 SNRPA1P09661 255 aaKnown RBP13.92□□□□□ -0.18
ARHGEF1-220ENST00000600274 PTH1RQ03431 593 aa13.92□□□□□ -0.18
ARHGEF1-220ENST00000600274 FMNL2Q96PY5 1086 aa13.92□□□□□ -0.18
ARHGEF1-220ENST00000600274 ALDH1L1O75891 902 aa13.92□□□□□ -0.18
ARHGEF1-220ENST00000600274 RNF214Q8ND24 703 aa13.92□□□□□ -0.18
ARHGEF1-220ENST00000600274 NCOA3Q9Y6Q9 1424 aa13.91□□□□□ -0.18
ARHGEF1-220ENST00000600274 NEURL1BA8MQ27 555 aa13.91□□□□□ -0.18
ARHGEF1-220ENST00000600274 SGSM2O43147 1006 aa13.91□□□□□ -0.18
ARHGEF1-220ENST00000600274 CHGBP05060 677 aa13.91□□□□□ -0.18
ARHGEF1-220ENST00000600274 MRE11P49959 708 aa13.91□□□□□ -0.18
ARHGEF1-220ENST00000600274 PDIA6Q15084 440 aa13.91□□□□□ -0.18
ARHGEF1-220ENST00000600274 SKOR2Q2VWA4 1001 aaPredicted RBP13.91□□□□□ -0.18
ARHGEF1-220ENST00000600274 NAP1L2Q9ULW6 460 aaPredicted RBP13.91□□□□□ -0.18
ARHGEF1-220ENST00000600274 SASH1O94885 1247 aa13.91□□□□□ -0.18
ARHGEF1-220ENST00000600274 GCKRQ14397 625 aa13.9□□□□□ -0.18
ARHGEF1-220ENST00000600274 CCDC83Q8IWF9 413 aa13.9□□□□□ -0.18
ARHGEF1-220ENST00000600274 KAZALD1Q96I82 304 aa13.9□□□□□ -0.18
ARHGEF1-220ENST00000600274 STK3Q13188 491 aa13.9□□□□□ -0.18
ARHGEF1-220ENST00000600274 CWC22Q9HCG8 908 aaKnown RBP13.9□□□□□ -0.18
ARHGEF1-220ENST00000600274 SNX14Q9Y5W7 946 aa13.9□□□□□ -0.18
ARHGEF1-220ENST00000600274 TTLL7Q6ZT98 887 aa13.9□□□□□ -0.18
ARHGEF1-220ENST00000600274 DCAF5Q96JK2 942 aa13.9□□□□□ -0.18
ARHGEF1-220ENST00000600274 HDAC5Q9UQL6 1122 aa13.9□□□□□ -0.18
ARHGEF1-220ENST00000600274 ZDHHC9Q9Y397 364 aa13.9□□□□□ -0.18
ARHGEF1-220ENST00000600274 PPFIA3O75145 1194 aa13.89□□□□□ -0.19
ARHGEF1-220ENST00000600274 AK2P54819 239 aa13.89□□□□□ -0.19
ARHGEF1-220ENST00000600274 NMIQ13287 307 aaPredicted RBP13.89□□□□□ -0.19
ARHGEF1-220ENST00000600274 LMBR1LQ6UX01 489 aa13.89□□□□□ -0.19
ARHGEF1-220ENST00000600274 ERC1Q8IUD2 1116 aa13.89□□□□□ -0.19
ARHGEF1-220ENST00000600274 NECAB1Q8N987 351 aa13.89□□□□□ -0.19
ARHGEF1-220ENST00000600274 RUFY2Q8WXA3 655 aa13.89□□□□□ -0.19
ARHGEF1-220ENST00000600274 VPS37CA5D8V6 355 aaPredicted RBP13.89□□□□□ -0.19
ARHGEF1-220ENST00000600274 TFCP2Q12800 502 aa13.89□□□□□ -0.19
ARHGEF1-220ENST00000600274 ADCK5Q3MIX3 580 aa13.89□□□□□ -0.19
ARHGEF1-220ENST00000600274 CHD2O14647 1828 aaKnown RBP13.89□□□□□ -0.19
ARHGEF1-220ENST00000600274 ZCRB1Q8TBF4 217 aaKnown RBP13.89□□□□□ -0.19
ARHGEF1-220ENST00000600274 FOSBP53539 338 aa13.88□□□□□ -0.19
ARHGEF1-220ENST00000600274 DDX46Q7L014 1031 aaKnown RBP13.88□□□□□ -0.19
ARHGEF1-220ENST00000600274 NSFL1CQ9UNZ2 370 aaKnown RBP13.88□□□□□ -0.19
ARHGEF1-220ENST00000600274 MEGF6O75095 1541 aa13.88□□□□□ -0.19
ARHGEF1-220ENST00000600274 FGD1P98174 961 aa13.88□□□□□ -0.19
ARHGEF1-220ENST00000600274 ZNF594Q96JF6 807 aaPredicted RBP13.88□□□□□ -0.19
ARHGEF1-220ENST00000600274 METTL22Q9BUU2 404 aaPredicted RBP13.88□□□□□ -0.19
ARHGEF1-220ENST00000600274 SYCE3A1L190 88 aa13.87□□□□□ -0.19
ARHGEF1-220ENST00000600274 HSPA4P34932 840 aa13.87□□□□□ -0.19
ARHGEF1-220ENST00000600274 SLFNL1Q499Z3 407 aa13.87□□□□□ -0.19
ARHGEF1-220ENST00000600274 BRINP3Q76B58 766 aa13.87□□□□□ -0.19
ARHGEF1-220ENST00000600274 SMC3Q9UQE7 1217 aa13.87□□□□□ -0.19
ARHGEF1-220ENST00000600274 ZNF335Q9H4Z2 1342 aaPredicted RBP13.87□□□□□ -0.19
ARHGEF1-220ENST00000600274 FAM177BA6PVY3 158 aa13.87□□□□□ -0.19
ARHGEF1-220ENST00000600274 ZKSCAN1P17029 563 aaPredicted RBP13.87□□□□□ -0.19
ARHGEF1-220ENST00000600274 CCDC129Q6ZRS4 1044 aa13.87□□□□□ -0.19
ARHGEF1-220ENST00000600274 MPNDQ8N594 471 aa13.87□□□□□ -0.19
ARHGEF1-220ENST00000600274 FIBPO43427 364 aa13.87□□□□□ -0.19
ARHGEF1-220ENST00000600274 NASPP49321 788 aaPredicted RBP13.87□□□□□ -0.19
ARHGEF1-220ENST00000600274 LSG1Q9H089 658 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms