RNA–Protein interactions for RNA: ENST00000600252.5

SYDE1-203, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 2 BASIC

Gene SYDE1, Length 3,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-203ENST00000600252 TTLL7Q6ZT98 887 aa15.39■□□□□ 0.05
SYDE1-203ENST00000600252 PPP1R42Q7Z4L9 355 aa15.39■□□□□ 0.05
SYDE1-203ENST00000600252 RNF123Q5XPI4 1314 aa15.38■□□□□ 0.05
SYDE1-203ENST00000600252 CLASRPQ8N2M8 674 aaKnown RBP15.38■□□□□ 0.05
SYDE1-203ENST00000600252 GJD4Q96KN9 370 aaPredicted RBP15.38■□□□□ 0.05
SYDE1-203ENST00000600252 GNPATO15228 680 aa15.38■□□□□ 0.05
SYDE1-203ENST00000600252 GCC1Q96CN9 775 aa15.38■□□□□ 0.05
SYDE1-203ENST00000600252 HOXB7P09629 217 aa15.38■□□□□ 0.05
SYDE1-203ENST00000600252 CCDC57Q2TAC2 916 aa15.38■□□□□ 0.05
SYDE1-203ENST00000600252 ZBTB40Q9NUA8 1239 aa15.38■□□□□ 0.05
SYDE1-203ENST00000600252 PIK3C2AO00443 1686 aa15.38■□□□□ 0.05
SYDE1-203ENST00000600252 SPATA31A1Q5TZJ5 1347 aa15.37■□□□□ 0.05
SYDE1-203ENST00000600252 ZBTB7BO15156 539 aaPredicted RBP15.37■□□□□ 0.05
SYDE1-203ENST00000600252 FAM161AQ3B820 660 aa15.37■□□□□ 0.05
SYDE1-203ENST00000600252 MTERF4Q7Z6M4 381 aaKnown RBP15.37■□□□□ 0.05
SYDE1-203ENST00000600252 CHD1LQ86WJ1 897 aa15.37■□□□□ 0.05
SYDE1-203ENST00000600252 CWC25Q9NXE8 425 aaPredicted RBP15.37■□□□□ 0.05
SYDE1-203ENST00000600252 MON2Q7Z3U7 1717 aa15.37■□□□□ 0.05
SYDE1-203ENST00000600252 LINS1Q8NG48 757 aa15.37■□□□□ 0.05
SYDE1-203ENST00000600252 LOC102724428A0A0B4J2F2 783 aa15.37■□□□□ 0.05
SYDE1-203ENST00000600252 XRCC6P12956 609 aaKnown RBP eCLIP15.37■□□□□ 0.05
SYDE1-203ENST00000600252 SIK1P57059 783 aa15.37■□□□□ 0.05
SYDE1-203ENST00000600252 HSP90AB4PQ58FF6 505 aa15.37■□□□□ 0.05
SYDE1-203ENST00000600252 CNNM1Q9NRU3 951 aa15.37■□□□□ 0.05
SYDE1-203ENST00000600252 PPP1R1BQ9UD71 204 aaPredicted RBP15.37■□□□□ 0.05
SYDE1-203ENST00000600252 SPATA31A6Q5VVP1 1343 aa15.36■□□□□ 0.05
SYDE1-203ENST00000600252 MEGF6O75095 1541 aa15.36■□□□□ 0.05
SYDE1-203ENST00000600252 GRM8O00222 908 aa15.36■□□□□ 0.05
SYDE1-203ENST00000600252 IGSF3O75054 1194 aa15.36■□□□□ 0.05
SYDE1-203ENST00000600252 NBPF7P0C2Y1 421 aaPredicted RBP15.36■□□□□ 0.05
SYDE1-203ENST00000600252 LRRCC1Q9C099 1032 aa15.36■□□□□ 0.05
SYDE1-203ENST00000600252 MAP4K4O95819 1239 aaPredicted RBP15.36■□□□□ 0.05
SYDE1-203ENST00000600252 RFC4P35249 363 aa15.36■□□□□ 0.05
SYDE1-203ENST00000600252 NUTM1Q86Y26 1132 aa15.36■□□□□ 0.05
SYDE1-203ENST00000600252 THRAP3Q9Y2W1 955 aaKnown RBP15.36■□□□□ 0.05
SYDE1-203ENST00000600252 IRX3P78415 501 aaPredicted RBP15.36■□□□□ 0.05
SYDE1-203ENST00000600252 MARCH10Q8NA82 808 aaPredicted RBP15.36■□□□□ 0.05
SYDE1-203ENST00000600252 PPP4R3BQ5MIZ7 849 aa15.35■□□□□ 0.05
SYDE1-203ENST00000600252 PLCB2Q00722 1185 aa15.35■□□□□ 0.05
SYDE1-203ENST00000600252 ZNF652Q9Y2D9 606 aa15.35■□□□□ 0.05
SYDE1-203ENST00000600252 ZBTB1Q9Y2K1 713 aa15.35■□□□□ 0.05
SYDE1-203ENST00000600252 TSHZ3Q63HK5 1081 aa15.35■□□□□ 0.05
SYDE1-203ENST00000600252 FAM89AQ96GI7 184 aa15.35■□□□□ 0.05
SYDE1-203ENST00000600252 NIP7Q9Y221 180 aaKnown RBP eCLIP15.35■□□□□ 0.05
SYDE1-203ENST00000600252 PXDNQ92626 1479 aa15.35■□□□□ 0.05
SYDE1-203ENST00000600252 CCDC24Q8N4L8 307 aa15.34■□□□□ 0.05
SYDE1-203ENST00000600252 PA2G4Q9UQ80 394 aaKnown RBP15.34■□□□□ 0.05
SYDE1-203ENST00000600252 KIF1AQ12756 1690 aa15.34■□□□□ 0.05
SYDE1-203ENST00000600252 NWD1Q149M9 1564 aa15.34■□□□□ 0.05
SYDE1-203ENST00000600252 IQSEC2Q5JU85 1478 aa15.34■□□□□ 0.05
SYDE1-203ENST00000600252 RXRBP28702 533 aa15.34■□□□□ 0.05
SYDE1-203ENST00000600252 ATG3Q9NT62 314 aa15.34■□□□□ 0.05
SYDE1-203ENST00000600252 APBA3O96018 575 aa15.34■□□□□ 0.05
SYDE1-203ENST00000600252 INTS3Q68E01 1043 aaKnown RBP15.34■□□□□ 0.05
SYDE1-203ENST00000600252 KRT27Q7Z3Y8 459 aa15.34■□□□□ 0.05
SYDE1-203ENST00000600252 TMX4Q9H1E5 349 aaPredicted RBP15.34■□□□□ 0.05
SYDE1-203ENST00000600252 VPS72Q15906 364 aa15.33■□□□□ 0.04
SYDE1-203ENST00000600252 ZNF772Q68DY9 489 aaPredicted RBP15.33■□□□□ 0.04
SYDE1-203ENST00000600252 LMBR1LQ6UX01 489 aa15.33■□□□□ 0.04
SYDE1-203ENST00000600252 MPHOSPH8Q99549 860 aa15.33■□□□□ 0.04
SYDE1-203ENST00000600252 TFCP2L1Q9NZI6 479 aa15.33■□□□□ 0.04
SYDE1-203ENST00000600252 RTCBQ9Y3I0 505 aaKnown RBP15.33■□□□□ 0.04
SYDE1-203ENST00000600252 SPATA31A5Q5VU36 1347 aa15.33■□□□□ 0.04
SYDE1-203ENST00000600252 SPATA31A7Q8IWB4 1347 aa15.33■□□□□ 0.04
SYDE1-203ENST00000600252 TAOK2Q9UL54 1235 aa15.33■□□□□ 0.04
SYDE1-203ENST00000600252 AKAP12Q02952 1782 aa15.33■□□□□ 0.04
SYDE1-203ENST00000600252 COL5A2P05997 1499 aaPredicted RBP15.33■□□□□ 0.04
SYDE1-203ENST00000600252 PTMSP20962 102 aa15.32■□□□□ 0.04
SYDE1-203ENST00000600252 AACSQ86V21 672 aa15.32■□□□□ 0.04
SYDE1-203ENST00000600252 CERS3Q8IU89 383 aa15.32■□□□□ 0.04
SYDE1-203ENST00000600252 ZFP91Q96JP5 570 aaPredicted RBP15.32■□□□□ 0.04
SYDE1-203ENST00000600252 CCDC87Q9NVE4 849 aa15.32■□□□□ 0.04
SYDE1-203ENST00000600252 BRD2P25440 801 aaKnown RBP15.32■□□□□ 0.04
SYDE1-203ENST00000600252 HSP90AB3PQ58FF7 597 aa15.32■□□□□ 0.04
SYDE1-203ENST00000600252 SMIM5Q71RC9 77 aa15.32■□□□□ 0.04
SYDE1-203ENST00000600252 KLHDC4Q8TBB5 520 aa15.32■□□□□ 0.04
SYDE1-203ENST00000600252 TRERF1Q96PN7 1200 aa15.32■□□□□ 0.04
SYDE1-203ENST00000600252 GRPEL1Q9HAV7 217 aa15.32■□□□□ 0.04
SYDE1-203ENST00000600252 SOS1Q07889 1333 aaPredicted RBP15.32■□□□□ 0.04
SYDE1-203ENST00000600252 CAMTA1Q9Y6Y1 1673 aa15.32■□□□□ 0.04
SYDE1-203ENST00000600252 TRAK2O60296 914 aa15.31■□□□□ 0.04
SYDE1-203ENST00000600252 CEP85Q6P2H3 762 aa15.31■□□□□ 0.04
SYDE1-203ENST00000600252 PLBD2Q8NHP8 589 aa15.31■□□□□ 0.04
SYDE1-203ENST00000600252 ANKRD44Q8N8A2 993 aa15.31■□□□□ 0.04
SYDE1-203ENST00000600252 G3V3G9 751 aa15.31■□□□□ 0.04
SYDE1-203ENST00000600252 ALDH1L1O75891 902 aa15.31■□□□□ 0.04
SYDE1-203ENST00000600252 DCAF8Q5TAQ9 597 aa15.31■□□□□ 0.04
SYDE1-203ENST00000600252 VPS37DQ86XT2 251 aa15.31■□□□□ 0.04
SYDE1-203ENST00000600252 SMAP1Q8IYB5 467 aaPredicted RBP15.31■□□□□ 0.04
SYDE1-203ENST00000600252 DNAJC2Q99543 621 aaKnown RBP15.31■□□□□ 0.04
SYDE1-203ENST00000600252 METTL22Q9BUU2 404 aaPredicted RBP15.31■□□□□ 0.04
SYDE1-203ENST00000600252 CCDC8Q9H0W5 538 aaPredicted RBP15.31■□□□□ 0.04
SYDE1-203ENST00000600252 C16orf71Q8IYS4 520 aaPredicted RBP15.3■□□□□ 0.04
SYDE1-203ENST00000600252 HEG1Q9ULI3 1381 aa15.3■□□□□ 0.04
SYDE1-203ENST00000600252 USP44Q9H0E7 712 aa15.3■□□□□ 0.04
SYDE1-203ENST00000600252 CRKLP46109 303 aaKnown RBP15.3■□□□□ 0.04
SYDE1-203ENST00000600252 STRCQ7RTU9 1775 aa15.3■□□□□ 0.04
SYDE1-203ENST00000600252 ABCC4O15439 1325 aa15.29■□□□□ 0.04
SYDE1-203ENST00000600252 IFIT5Q13325 482 aaKnown RBP15.29■□□□□ 0.04
SYDE1-203ENST00000600252 BICC1Q9H694 974 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms