RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 TIAM2Q8IVF5 1701 aa22.96■■□□□ 1.27
SMG9-210ENST00000600097 U2AF1L5P0DN76 240 aaPredicted RBP22.95■■□□□ 1.26
SMG9-210ENST00000600097 SRGNP10124 158 aa22.95■■□□□ 1.26
SMG9-210ENST00000600097 U2AF1Q01081 240 aaKnown RBP eCLIP22.95■■□□□ 1.26
SMG9-210ENST00000600097 MASTLQ96GX5 879 aa22.95■■□□□ 1.26
SMG9-210ENST00000600097 ZNF652Q9Y2D9 606 aa22.95■■□□□ 1.26
SMG9-210ENST00000600097 POTECB2RU33 542 aa22.94■■□□□ 1.26
SMG9-210ENST00000600097 PRPF40BQ6NWY9 871 aaKnown RBP22.94■■□□□ 1.26
SMG9-210ENST00000600097 HTATSF1O43719 755 aaKnown RBP22.93■■□□□ 1.26
SMG9-210ENST00000600097 NBPF5PQ86XG9 351 aaPredicted RBP22.93■■□□□ 1.26
SMG9-210ENST00000600097 COL11A2P13942 1736 aaPredicted RBP22.92■■□□□ 1.26
SMG9-210ENST00000600097 RGL2O15211 777 aa22.92■■□□□ 1.26
SMG9-210ENST00000600097 PPP2R1AP30153 589 aa22.92■■□□□ 1.26
SMG9-210ENST00000600097 MCM10Q7L590 875 aa22.92■■□□□ 1.26
SMG9-210ENST00000600097 CCDC88AQ3V6T2 1871 aa22.92■■□□□ 1.26
SMG9-210ENST00000600097 PIP4K2AP48426 406 aaPredicted RBP22.91■■□□□ 1.26
SMG9-210ENST00000600097 FER1L6Q2WGJ9 1857 aa22.9■■□□□ 1.26
SMG9-210ENST00000600097 PRAMEF22A3QJZ6 481 aa22.9■■□□□ 1.26
SMG9-210ENST00000600097 BCORQ6W2J9 1755 aa22.89■■□□□ 1.26
SMG9-210ENST00000600097 TPTE2Q6XPS3 522 aa22.89■■□□□ 1.25
SMG9-210ENST00000600097 NPR1P16066 1061 aa22.88■■□□□ 1.25
SMG9-210ENST00000600097 COL13A1Q5TAT6 717 aaPredicted RBP22.88■■□□□ 1.25
SMG9-210ENST00000600097 DICER1Q9UPY3 1922 aaKnown RBP22.88■■□□□ 1.25
SMG9-210ENST00000600097 KLRG2A4D1S0 409 aaPredicted RBP22.87■■□□□ 1.25
SMG9-210ENST00000600097 TAF7Q15545 349 aaPredicted RBP22.87■■□□□ 1.25
SMG9-210ENST00000600097 CCDC93Q567U6 631 aa22.87■■□□□ 1.25
SMG9-210ENST00000600097 C7orf43Q8WVR3 580 aa22.87■■□□□ 1.25
SMG9-210ENST00000600097 NIP7Q9Y221 180 aaKnown RBP eCLIP22.87■■□□□ 1.25
SMG9-210ENST00000600097 SLX4Q8IY92 1834 aa22.87■■□□□ 1.25
SMG9-210ENST00000600097 NBPF26B4DH59 902 aa22.86■■□□□ 1.25
SMG9-210ENST00000600097 DDNO94850 711 aaPredicted RBP22.86■■□□□ 1.25
SMG9-210ENST00000600097 DCTN1Q14203 1278 aa22.86■■□□□ 1.25
SMG9-210ENST00000600097 CHADLQ6NUI6 762 aa22.86■■□□□ 1.25
SMG9-210ENST00000600097 NBPF10Q6P3W6 841 aaKnown RBP22.86■■□□□ 1.25
SMG9-210ENST00000600097 NBPF15Q8N660 670 aa22.86■■□□□ 1.25
SMG9-210ENST00000600097 IQCA1LA6NCM1 817 aa22.84■■□□□ 1.25
SMG9-210ENST00000600097 NEFMP07197 916 aa22.84■■□□□ 1.25
SMG9-210ENST00000600097 ARFGEF2Q9Y6D5 1785 aa22.83■■□□□ 1.24
SMG9-210ENST00000600097 FKBP4Q02790 459 aaKnown RBP eCLIP22.82■■□□□ 1.24
SMG9-210ENST00000600097 RTKN2Q8IZC4 609 aa22.82■■□□□ 1.24
SMG9-210ENST00000600097 PNISRQ8TF01 805 aaKnown RBP22.82■■□□□ 1.24
SMG9-210ENST00000600097 L3MBTL3Q96JM7 780 aaPredicted RBP22.82■■□□□ 1.24
SMG9-210ENST00000600097 CREBZFQ9NS37 354 aa22.82■■□□□ 1.24
SMG9-210ENST00000600097 HSPA1AP0DMV8 641 aaKnown RBP22.81■■□□□ 1.24
SMG9-210ENST00000600097 HSPA1BP0DMV9 641 aaKnown RBP22.81■■□□□ 1.24
SMG9-210ENST00000600097 GTF2E1P29083 439 aaPredicted RBP22.81■■□□□ 1.24
SMG9-210ENST00000600097 ALDH1B1P30837 517 aa22.81■■□□□ 1.24
SMG9-210ENST00000600097 PCNTO95613 3336 aa22.8■■□□□ 1.24
SMG9-210ENST00000600097 FAM177BA6PVY3 158 aa22.79■■□□□ 1.24
SMG9-210ENST00000600097 POTEIP0CG38 1075 aa22.79■■□□□ 1.24
SMG9-210ENST00000600097 POTEJP0CG39 1038 aa22.79■■□□□ 1.24
SMG9-210ENST00000600097 HLFQ16534 295 aa22.79■■□□□ 1.24
SMG9-210ENST00000600097 LDHDQ86WU2 507 aa22.79■■□□□ 1.24
SMG9-210ENST00000600097 TNS4Q8IZW8 715 aa22.79■■□□□ 1.24
SMG9-210ENST00000600097 MIS18AQ9NYP9 233 aa22.79■■□□□ 1.24
SMG9-210ENST00000600097 ERVV-1B6SEH8 477 aa22.78■■□□□ 1.24
SMG9-210ENST00000600097 CACNA1SQ13698 1873 aa22.78■■□□□ 1.24
SMG9-210ENST00000600097 NYXQ9GZU5 481 aa22.78■■□□□ 1.24
SMG9-210ENST00000600097 TAF1DQ9H5J8 278 aaPredicted RBP22.78■■□□□ 1.24
SMG9-210ENST00000600097 ZNF277Q9NRM2 450 aaPredicted RBP22.78■■□□□ 1.24
SMG9-210ENST00000600097 CRY2Q49AN0 593 aa22.75■■□□□ 1.23
SMG9-210ENST00000600097 IARSP41252 1262 aaKnown RBP22.74■■□□□ 1.23
SMG9-210ENST00000600097 OLFM4Q6UX06 510 aa22.74■■□□□ 1.23
SMG9-210ENST00000600097 KIF6Q6ZMV9 814 aa22.74■■□□□ 1.23
SMG9-210ENST00000600097 NGEFQ8N5V2 710 aa22.74■■□□□ 1.23
SMG9-210ENST00000600097 MKRN1Q9UHC7 482 aaKnown RBP22.74■■□□□ 1.23
SMG9-210ENST00000600097 HACL1Q9UJ83 578 aa22.74■■□□□ 1.23
SMG9-210ENST00000600097 MAP3K15Q6ZN16 1313 aa22.74■■□□□ 1.23
SMG9-210ENST00000600097 ZNF541Q9H0D2 1346 aa22.74■■□□□ 1.23
SMG9-210ENST00000600097 SCN4AP35499 1836 aa22.73■■□□□ 1.23
SMG9-210ENST00000600097 EIF4A1P60842 406 aaKnown RBP22.73■■□□□ 1.23
SMG9-210ENST00000600097 CC2D2BQ6DHV5 1058 aa22.73■■□□□ 1.23
SMG9-210ENST00000600097 SYNE4Q8N205 404 aa22.73■■□□□ 1.23
SMG9-210ENST00000600097 PSMD1Q99460 953 aa22.73■■□□□ 1.23
SMG9-210ENST00000600097 PNNQ9H307 717 aaKnown RBP22.73■■□□□ 1.23
SMG9-210ENST00000600097 PASKQ96RG2 1323 aa22.73■■□□□ 1.23
SMG9-210ENST00000600097 LAMB4A4D0S4 1761 aa22.73■■□□□ 1.23
SMG9-210ENST00000600097 FZD9O00144 591 aa22.72■■□□□ 1.23
SMG9-210ENST00000600097 NFE2L2Q16236 605 aa22.72■■□□□ 1.23
SMG9-210ENST00000600097 PLEKHF1Q96S99 279 aa22.72■■□□□ 1.23
SMG9-210ENST00000600097 RRP7AQ9Y3A4 280 aaKnown RBP22.72■■□□□ 1.23
SMG9-210ENST00000600097 EAPPQ56P03 285 aaPredicted RBP22.71■■□□□ 1.23
SMG9-210ENST00000600097 PNMA8AQ86V59 439 aaPredicted RBP22.71■■□□□ 1.23
SMG9-210ENST00000600097 NUTM1Q86Y26 1132 aa22.71■■□□□ 1.23
SMG9-210ENST00000600097 JDP2Q8WYK2 163 aa22.71■■□□□ 1.23
SMG9-210ENST00000600097 IBTKQ9P2D0 1353 aaPredicted RBP22.71■■□□□ 1.23
SMG9-210ENST00000600097 EPHX2P34913 555 aa22.7■■□□□ 1.22
SMG9-210ENST00000600097 GRIPAP1Q4V328 841 aa22.7■■□□□ 1.22
SMG9-210ENST00000600097 TTLL7Q6ZT98 887 aa22.7■■□□□ 1.22
SMG9-210ENST00000600097 GPC2Q8N158 579 aa22.7■■□□□ 1.22
SMG9-210ENST00000600097 RPGRQ92834 1020 aaKnown RBP22.7■■□□□ 1.22
SMG9-210ENST00000600097 CNTNAP1P78357 1384 aa22.7■■□□□ 1.22
SMG9-210ENST00000600097 ABCC12Q96J65 1359 aa22.7■■□□□ 1.22
SMG9-210ENST00000600097 RIC1Q4ADV7 1423 aa22.7■■□□□ 1.22
SMG9-210ENST00000600097 ERBB4Q15303 1308 aa22.69■■□□□ 1.22
SMG9-210ENST00000600097 MAPK8IP3Q9UPT6 1336 aa22.69■■□□□ 1.22
SMG9-210ENST00000600097 TMEM88BA6NKF7 163 aa22.69■■□□□ 1.22
SMG9-210ENST00000600097 ITGBL1O95965 494 aaPredicted RBP22.69■■□□□ 1.22
SMG9-210ENST00000600097 MYL6BP14649 208 aa22.69■■□□□ 1.22
SMG9-210ENST00000600097 HOXA10P31260 410 aaPredicted RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms