RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	ZNF428	Q96B54	188 aa		28.15	■■■□□ 2.1
LTBP4-227	ENST00000600026	BCL2L12	Q9HB09	334 aa		28.15	■■■□□ 2.1
LTBP4-227	ENST00000600026	HYPK	Q9NX55	129 aa		28.15	■■■□□ 2.1
LTBP4-227	ENST00000600026	ARFGEF2	Q9Y6D5	1785 aa		28.14	■■■□□ 2.09
LTBP4-227	ENST00000600026	KIF6	Q6ZMV9	814 aa		28.13	■■■□□ 2.09
LTBP4-227	ENST00000600026	COPS6	Q7L5N1	327 aa		28.13	■■■□□ 2.09
LTBP4-227	ENST00000600026	ANKRD36C	Q5JPF3	1778 aa		28.13	■■■□□ 2.09
LTBP4-227	ENST00000600026	AIMP1	Q12904	312 aa	Known RBP	28.12	■■■□□ 2.09
LTBP4-227	ENST00000600026	FKBP8	Q14318	412 aa		28.12	■■■□□ 2.09
LTBP4-227	ENST00000600026	SPON1	Q9HCB6	807 aa		28.12	■■■□□ 2.09
LTBP4-227	ENST00000600026	MAP3K15	Q6ZN16	1313 aa		28.12	■■■□□ 2.09
LTBP4-227	ENST00000600026	NLGN1	Q8N2Q7	840 aa		28.11	■■■□□ 2.09
LTBP4-227	ENST00000600026	PHAX	Q9H814	394 aa	Known RBP	28.11	■■■□□ 2.09
LTBP4-227	ENST00000600026	ZBTB3	Q9H5J0	574 aa		28.1	■■■□□ 2.09
LTBP4-227	ENST00000600026	RCAN3	Q9UKA8	241 aa		28.1	■■■□□ 2.09
LTBP4-227	ENST00000600026	SLC4A2	P04920	1241 aa		28.09	■■■□□ 2.09
LTBP4-227	ENST00000600026	PTGER2	P43116	358 aa		28.09	■■■□□ 2.09
LTBP4-227	ENST00000600026	SGIP1	Q9BQI5	828 aa		28.09	■■■□□ 2.09
LTBP4-227	ENST00000600026	ERVV-1	B6SEH8	477 aa		28.08	■■■□□ 2.09
LTBP4-227	ENST00000600026	HLF	Q16534	295 aa		28.08	■■■□□ 2.09
LTBP4-227	ENST00000600026	ALDH1L2	Q3SY69	923 aa		28.08	■■■□□ 2.09
LTBP4-227	ENST00000600026	G2E3	Q7L622	706 aa		28.08	■■■□□ 2.09
LTBP4-227	ENST00000600026	AFDN	P55196	1824 aa	Known RBP	28.07	■■■□□ 2.08
LTBP4-227	ENST00000600026	RGL2	O15211	777 aa		28.07	■■■□□ 2.08
LTBP4-227	ENST00000600026	ZNF652	Q9Y2D9	606 aa		28.07	■■■□□ 2.08
LTBP4-227	ENST00000600026	POLD1	P28340	1107 aa		28.06	■■■□□ 2.08
LTBP4-227	ENST00000600026	RARS	P54136	660 aa	Known RBP	28.06	■■■□□ 2.08
LTBP4-227	ENST00000600026	MMP10	P09238	476 aa		28.05	■■■□□ 2.08
LTBP4-227	ENST00000600026	TBC1D9B	Q66K14	1250 aa		28.05	■■■□□ 2.08
LTBP4-227	ENST00000600026	CLEC4G	Q6UXB4	293 aa		28.05	■■■□□ 2.08
LTBP4-227	ENST00000600026	NRXN2	Q9P2S2	1712 aa		28.04	■■■□□ 2.08
LTBP4-227	ENST00000600026	NFIX	Q14938	502 aa		28.04	■■■□□ 2.08
LTBP4-227	ENST00000600026	SSH1	Q8WYL5	1049 aa		28.04	■■■□□ 2.08
LTBP4-227	ENST00000600026	ATP10D	Q9P241	1426 aa		28.03	■■■□□ 2.08
LTBP4-227	ENST00000600026	TM4SF1	P30408	202 aa		28.03	■■■□□ 2.08
LTBP4-227	ENST00000600026	DDR1	Q08345	913 aa		28.03	■■■□□ 2.08
LTBP4-227	ENST00000600026	FLII	Q13045	1269 aa		28.03	■■■□□ 2.08
LTBP4-227	ENST00000600026	GIGYF2	Q6Y7W6	1299 aa	Known RBP	28.03	■■■□□ 2.08
LTBP4-227	ENST00000600026	MRPL50	Q8N5N7	158 aa	Known RBP	28.03	■■■□□ 2.08
LTBP4-227	ENST00000600026	PLBD2	Q8NHP8	589 aa		28.03	■■■□□ 2.08
LTBP4-227	ENST00000600026	SMC4	Q9NTJ3	1288 aa		28.03	■■■□□ 2.08
LTBP4-227	ENST00000600026	BICDL1	Q6ZP65	573 aa		28.02	■■■□□ 2.08
LTBP4-227	ENST00000600026	ANKRD13D	Q6ZTN6	518 aa		28.02	■■■□□ 2.08
LTBP4-227	ENST00000600026	BCL2L13	Q9BXK5	485 aa		28.02	■■■□□ 2.08
LTBP4-227	ENST00000600026	POLRMT	O00411	1230 aa	Known RBP	28	■■■□□ 2.07
LTBP4-227	ENST00000600026	DDX58	O95786	925 aa	Known RBP	28	■■■□□ 2.07
LTBP4-227	ENST00000600026	PPP1R1B	Q9UD71	204 aa	Predicted RBP	28	■■■□□ 2.07
LTBP4-227	ENST00000600026	PARP3	Q9Y6F1	533 aa		28	■■■□□ 2.07
LTBP4-227	ENST00000600026	ADCY9	O60503	1353 aa		27.99	■■■□□ 2.07
LTBP4-227	ENST00000600026	CARMIL3	Q8ND23	1372 aa		27.99	■■■□□ 2.07
LTBP4-227	ENST00000600026	RIC3	Q7Z5B4	369 aa		27.99	■■■□□ 2.07
LTBP4-227	ENST00000600026	NIP7	Q9Y221	180 aa	Known RBP eCLIP	27.99	■■■□□ 2.07
LTBP4-227	ENST00000600026	FKBP5	Q13451	457 aa	Predicted RBP	27.98	■■■□□ 2.07
LTBP4-227	ENST00000600026	KIF13B	Q9NQT8	1826 aa		27.97	■■■□□ 2.07
LTBP4-227	ENST00000600026	BCAR3	O75815	825 aa		27.97	■■■□□ 2.07
LTBP4-227	ENST00000600026	HSP90AB3P	Q58FF7	597 aa		27.97	■■■□□ 2.07
LTBP4-227	ENST00000600026	KSR2	Q6VAB6	950 aa		27.97	■■■□□ 2.07
LTBP4-227	ENST00000600026	SETDB2	Q96T68	719 aa		27.97	■■■□□ 2.07
LTBP4-227	ENST00000600026	PI4KAP2	A4QPH2	592 aa		27.96	■■■□□ 2.07
LTBP4-227	ENST00000600026	GPT	P24298	496 aa		27.96	■■■□□ 2.07
LTBP4-227	ENST00000600026	BRPF1	P55201	1214 aa	Predicted RBP	27.96	■■■□□ 2.07
LTBP4-227	ENST00000600026	ZNF34	Q8IZ26	560 aa		27.96	■■■□□ 2.07
LTBP4-227	ENST00000600026	PI4KAP1	Q8N8J0	262 aa		27.96	■■■□□ 2.07
LTBP4-227	ENST00000600026	UBN2	Q6ZU65	1347 aa		27.95	■■■□□ 2.07
LTBP4-227	ENST00000600026	KIF16B	Q96L93	1317 aa		27.95	■■■□□ 2.07
LTBP4-227	ENST00000600026	TCIRG1	Q13488	830 aa		27.95	■■■□□ 2.06
LTBP4-227	ENST00000600026	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	27.95	■■■□□ 2.06
LTBP4-227	ENST00000600026	MAP3K2	Q9Y2U5	619 aa		27.95	■■■□□ 2.06
LTBP4-227	ENST00000600026	SERPINB2	P05120	415 aa		27.94	■■■□□ 2.06
LTBP4-227	ENST00000600026	C10orf71	Q711Q0	1435 aa		27.92	■■■□□ 2.06
LTBP4-227	ENST00000600026	MYD88	Q99836	296 aa		27.92	■■■□□ 2.06
LTBP4-227	ENST00000600026	METTL22	Q9BUU2	404 aa	Predicted RBP	27.92	■■■□□ 2.06
LTBP4-227	ENST00000600026	ANKRD31	Q8N7Z5	1873 aa		27.91	■■■□□ 2.06
LTBP4-227	ENST00000600026	IPO8	O15397	1037 aa	Known RBP	27.91	■■■□□ 2.06
LTBP4-227	ENST00000600026	FRAT1	Q92837	279 aa	Predicted RBP	27.91	■■■□□ 2.06
LTBP4-227	ENST00000600026	ISCA1	Q9BUE6	129 aa		27.91	■■■□□ 2.06
LTBP4-227	ENST00000600026	SUPT16H	Q9Y5B9	1047 aa	Known RBP	27.91	■■■□□ 2.06
LTBP4-227	ENST00000600026	N4BP2	Q86UW6	1770 aa	Predicted RBP	27.91	■■■□□ 2.06
LTBP4-227	ENST00000600026	PTPRC	P08575	1304 aa		27.91	■■■□□ 2.06
LTBP4-227	ENST00000600026	IBTK	Q9P2D0	1353 aa	Predicted RBP	27.9	■■■□□ 2.06
LTBP4-227	ENST00000600026	FAM177B	A6PVY3	158 aa		27.9	■■■□□ 2.06
LTBP4-227	ENST00000600026	ATP5J2-PTCD1	G3V325	749 aa		27.9	■■■□□ 2.06
LTBP4-227	ENST00000600026	PARP10	Q53GL7	1025 aa		27.9	■■■□□ 2.06
LTBP4-227	ENST00000600026	DNAAF4	Q8WXU2	420 aa		27.9	■■■□□ 2.06
LTBP4-227	ENST00000600026	KIAA1551	Q9HCM1	1747 aa		27.89	■■■□□ 2.06
LTBP4-227	ENST00000600026		F6X3S4	739 aa		27.89	■■■□□ 2.06
LTBP4-227	ENST00000600026	PRR5L	Q6MZQ0	368 aa		27.89	■■■□□ 2.06
LTBP4-227	ENST00000600026	NLRP10	Q86W26	655 aa		27.89	■■■□□ 2.06
LTBP4-227	ENST00000600026	NBPF5P	Q86XG9	351 aa	Predicted RBP	27.89	■■■□□ 2.06
LTBP4-227	ENST00000600026	NOB1	Q9ULX3	412 aa	Known RBP	27.89	■■■□□ 2.06
LTBP4-227	ENST00000600026	SUSD4	Q5VX71	490 aa		27.88	■■■□□ 2.05
LTBP4-227	ENST00000600026	KLHL34	Q8N239	644 aa		27.88	■■■□□ 2.05
LTBP4-227	ENST00000600026	CNBD1	Q8NA66	436 aa		27.88	■■■□□ 2.05
LTBP4-227	ENST00000600026	RRP1	P56182	461 aa	Known RBP	27.87	■■■□□ 2.05
LTBP4-227	ENST00000600026	ZKSCAN2	Q63HK3	967 aa		27.87	■■■□□ 2.05
LTBP4-227	ENST00000600026	NTSR2	O95665	410 aa		27.86	■■■□□ 2.05
LTBP4-227	ENST00000600026	NEXN	Q0ZGT2	675 aa		27.86	■■■□□ 2.05
LTBP4-227	ENST00000600026	PPP1R42	Q7Z4L9	355 aa		27.86	■■■□□ 2.05
LTBP4-227	ENST00000600026	ARHGAP45	Q92619	1136 aa		27.86	■■■□□ 2.05
LTBP4-227	ENST00000600026	FHDC1	Q9C0D6	1143 aa	Predicted RBP	27.86	■■■□□ 2.05

Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms