RNA–Protein interactions for RNA: ENST00000599953.1

ZNF544-215, Transcript of zinc finger protein 544, humanhuman

TSL 5 BASIC

Gene ZNF544, Length 2,274 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-215ENST00000599953 KRT28Q7Z3Y7 464 aa13□□□□□ -0.33
ZNF544-215ENST00000599953 FOXD4L4Q8WXT5 416 aaPredicted RBP13□□□□□ -0.33
ZNF544-215ENST00000599953 EVI5LQ96CN4 794 aa13□□□□□ -0.33
ZNF544-215ENST00000599953 MST1RQ04912 1400 aa13□□□□□ -0.33
ZNF544-215ENST00000599953 UTYO14607 1347 aa13□□□□□ -0.33
ZNF544-215ENST00000599953 XPCQ01831 940 aaPredicted RBP13□□□□□ -0.33
ZNF544-215ENST00000599953 SIPA1L3O60292 1781 aaPredicted RBP12.99□□□□□ -0.33
ZNF544-215ENST00000599953 TRPM3Q9HCF6 1732 aaPredicted RBP12.99□□□□□ -0.33
ZNF544-215ENST00000599953 ADAMTS7Q9UKP4 1686 aa12.99□□□□□ -0.33
ZNF544-215ENST00000599953 PHF14O94880 888 aa12.99□□□□□ -0.33
ZNF544-215ENST00000599953 G3BP1Q13283 466 aaKnown RBP eCLIP12.99□□□□□ -0.33
ZNF544-215ENST00000599953 RAPGEF4Q8WZA2 1011 aa12.99□□□□□ -0.33
ZNF544-215ENST00000599953 LIMCH1Q9UPQ0 1083 aa12.99□□□□□ -0.33
ZNF544-215ENST00000599953 ERBB3P21860 1342 aa12.99□□□□□ -0.33
ZNF544-215ENST00000599953 NEXNQ0ZGT2 675 aa12.99□□□□□ -0.33
ZNF544-215ENST00000599953 PROSER3Q2NL68 480 aa12.99□□□□□ -0.33
ZNF544-215ENST00000599953 HS1BP3Q53T59 392 aa12.99□□□□□ -0.33
ZNF544-215ENST00000599953 TTC14Q96N46 770 aa12.99□□□□□ -0.33
ZNF544-215ENST00000599953 PRIM1P49642 420 aaKnown RBP12.98□□□□□ -0.33
ZNF544-215ENST00000599953 CWF19L2Q2TBE0 894 aaKnown RBP12.98□□□□□ -0.33
ZNF544-215ENST00000599953 LARP1Q6PKG0 1096 aaKnown RBP12.98□□□□□ -0.33
ZNF544-215ENST00000599953 AACSQ86V21 672 aa12.98□□□□□ -0.33
ZNF544-215ENST00000599953 TMEM63CQ9P1W3 806 aa12.98□□□□□ -0.33
ZNF544-215ENST00000599953 RBM27Q9P2N5 1060 aaKnown RBP12.98□□□□□ -0.33
ZNF544-215ENST00000599953 ADAMTSL3P82987 1691 aa12.98□□□□□ -0.33
ZNF544-215ENST00000599953 PROSER2Q86WR7 435 aaPredicted RBP12.97□□□□□ -0.33
ZNF544-215ENST00000599953 ATP6V1DQ9Y5K8 247 aa12.97□□□□□ -0.33
ZNF544-215ENST00000599953 PLEKHG2Q9H7P9 1386 aa12.97□□□□□ -0.33
ZNF544-215ENST00000599953 C1orf167Q5SNV9 1468 aa12.97□□□□□ -0.33
ZNF544-215ENST00000599953 SYCE3A1L190 88 aa12.97□□□□□ -0.33
ZNF544-215ENST00000599953 AK2P54819 239 aa12.97□□□□□ -0.33
ZNF544-215ENST00000599953 RIC3Q7Z5B4 369 aa12.97□□□□□ -0.33
ZNF544-215ENST00000599953 ZSCAN30Q86W11 494 aa12.97□□□□□ -0.33
ZNF544-215ENST00000599953 NAP1L5Q96NT1 182 aaPredicted RBP12.97□□□□□ -0.33
ZNF544-215ENST00000599953 TM6SF1Q9BZW5 370 aa12.97□□□□□ -0.33
ZNF544-215ENST00000599953 RBSNQ9H1K0 784 aa12.97□□□□□ -0.33
ZNF544-215ENST00000599953 SPG7Q9UQ90 795 aa12.97□□□□□ -0.33
ZNF544-215ENST00000599953 AXIN2Q9Y2T1 843 aa12.97□□□□□ -0.33
ZNF544-215ENST00000599953 ERBB4Q15303 1308 aa12.96□□□□□ -0.33
ZNF544-215ENST00000599953 ZKSCAN1P17029 563 aaPredicted RBP12.96□□□□□ -0.33
ZNF544-215ENST00000599953 TATP17735 454 aaPredicted RBP12.96□□□□□ -0.33
ZNF544-215ENST00000599953 CASTP20810 708 aaKnown RBP12.96□□□□□ -0.33
ZNF544-215ENST00000599953 MSNP26038 577 aaKnown RBP12.96□□□□□ -0.33
ZNF544-215ENST00000599953 ZNF790Q6PG37 636 aa12.96□□□□□ -0.33
ZNF544-215ENST00000599953 SUCLG2Q96I99 432 aa12.96□□□□□ -0.33
ZNF544-215ENST00000599953 ZSCAN31Q96LW9 406 aaPredicted RBP12.96□□□□□ -0.33
ZNF544-215ENST00000599953 PA2G4Q9UQ80 394 aaKnown RBP12.96□□□□□ -0.33
ZNF544-215ENST00000599953 SMC3Q9UQE7 1217 aa12.96□□□□□ -0.33
ZNF544-215ENST00000599953 AIMP1Q12904 312 aaKnown RBP12.96□□□□□ -0.34
ZNF544-215ENST00000599953 VPS53Q5VIR6 699 aa12.96□□□□□ -0.34
ZNF544-215ENST00000599953 RASEFQ8IZ41 740 aa12.96□□□□□ -0.34
ZNF544-215ENST00000599953 BICC1Q9H694 974 aaKnown RBP12.96□□□□□ -0.34
ZNF544-215ENST00000599953 C19orf44Q9H6X5 657 aa12.96□□□□□ -0.34
ZNF544-215ENST00000599953 SLC52A2Q9HAB3 445 aa12.96□□□□□ -0.34
ZNF544-215ENST00000599953 SH2B1Q9NRF2 756 aaPredicted RBP12.96□□□□□ -0.34
ZNF544-215ENST00000599953 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.96□□□□□ -0.34
ZNF544-215ENST00000599953 NPHP3Q7Z494 1330 aa12.95□□□□□ -0.34
ZNF544-215ENST00000599953 TMEM87AQ8NBN3 555 aa12.95□□□□□ -0.34
ZNF544-215ENST00000599953 KCNB2Q92953 911 aa12.95□□□□□ -0.34
ZNF544-215ENST00000599953 CYP46A1Q9Y6A2 500 aa12.95□□□□□ -0.34
ZNF544-215ENST00000599953 ABCC6O95255 1503 aa12.95□□□□□ -0.34
ZNF544-215ENST00000599953 PRAMEF22A3QJZ6 481 aa12.95□□□□□ -0.34
ZNF544-215ENST00000599953 ZSCAN22P10073 491 aaPredicted RBP12.95□□□□□ -0.34
ZNF544-215ENST00000599953 PDIA4P13667 645 aaKnown RBP12.95□□□□□ -0.34
ZNF544-215ENST00000599953 CSPP1Q1MSJ5 1256 aa12.95□□□□□ -0.34
ZNF544-215ENST00000599953 DNAJC5Q9H3Z4 198 aa12.95□□□□□ -0.34
ZNF544-215ENST00000599953 PDRG1Q9NUG6 133 aa12.95□□□□□ -0.34
ZNF544-215ENST00000599953 RPAP1Q9BWH6 1393 aaPredicted RBP12.95□□□□□ -0.34
ZNF544-215ENST00000599953 CCDC171Q6TFL3 1326 aa12.94□□□□□ -0.34
ZNF544-215ENST00000599953 STX6O43752 255 aa12.94□□□□□ -0.34
ZNF544-215ENST00000599953 PDIA6Q15084 440 aa12.94□□□□□ -0.34
ZNF544-215ENST00000599953 RUFY3Q7L099 469 aa12.94□□□□□ -0.34
ZNF544-215ENST00000599953 CHAMP1Q96JM3 812 aa12.94□□□□□ -0.34
ZNF544-215ENST00000599953 PDLIM2Q96JY6 352 aa12.94□□□□□ -0.34
ZNF544-215ENST00000599953 JAKMIP1Q96N16 626 aaKnown RBP12.94□□□□□ -0.34
ZNF544-215ENST00000599953 NLRP2Q9NX02 1062 aa12.94□□□□□ -0.34
ZNF544-215ENST00000599953 PSMA5P28066 241 aa12.93□□□□□ -0.34
ZNF544-215ENST00000599953 KCNJ4P48050 445 aa12.93□□□□□ -0.34
ZNF544-215ENST00000599953 PRPF40BQ6NWY9 871 aaKnown RBP12.93□□□□□ -0.34
ZNF544-215ENST00000599953 TSPY26PQ9H489 355 aa12.93□□□□□ -0.34
ZNF544-215ENST00000599953 ZSWIM6Q9HCJ5 1215 aa12.93□□□□□ -0.34
ZNF544-215ENST00000599953 NSFL1CQ9UNZ2 370 aaKnown RBP12.93□□□□□ -0.34
ZNF544-215ENST00000599953 ALS2Q96Q42 1657 aa12.93□□□□□ -0.34
ZNF544-215ENST00000599953 SCN11AQ9UI33 1791 aa12.93□□□□□ -0.34
ZNF544-215ENST00000599953 NEURL1BA8MQ27 555 aa12.93□□□□□ -0.34
ZNF544-215ENST00000599953 SASH1O94885 1247 aa12.93□□□□□ -0.34
ZNF544-215ENST00000599953 PHKG2P15735 406 aa12.93□□□□□ -0.34
ZNF544-215ENST00000599953 ZC3H6P61129 1189 aaKnown RBP12.93□□□□□ -0.34
ZNF544-215ENST00000599953 RNF20Q5VTR2 975 aa12.93□□□□□ -0.34
ZNF544-215ENST00000599953 USP48Q86UV5 1035 aa12.93□□□□□ -0.34
ZNF544-215ENST00000599953 IFNL2Q8IZJ0 200 aa12.93□□□□□ -0.34
ZNF544-215ENST00000599953 TTC5Q8N0Z6 440 aa12.93□□□□□ -0.34
ZNF544-215ENST00000599953 METTL22Q9BUU2 404 aaPredicted RBP12.93□□□□□ -0.34
ZNF544-215ENST00000599953 LETM1O95202 739 aaPredicted RBP12.92□□□□□ -0.34
ZNF544-215ENST00000599953 IGKV5-2P06315 115 aa12.92□□□□□ -0.34
ZNF544-215ENST00000599953 PTH1RQ03431 593 aa12.92□□□□□ -0.34
ZNF544-215ENST00000599953 NECTIN1Q15223 517 aa12.92□□□□□ -0.34
ZNF544-215ENST00000599953 KLHL34Q8N239 644 aa12.92□□□□□ -0.34
ZNF544-215ENST00000599953 EAF2Q96CJ1 260 aaPredicted RBP12.92□□□□□ -0.34
ZNF544-215ENST00000599953 KAZALD1Q96I82 304 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms