RNA–Protein interactions for RNA: ENST00000599735.3

LINC02028-213, Transcript of long intergenic non-protein coding RNA 2028, humanhuman

TSL 5

Gene LINC02028, Length 726 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02028-213ENST00000599735 KCNQ3O43525 872 aa16.42■□□□□ 0.22
LINC02028-213ENST00000599735 NPHP1O15259 732 aa16.41■□□□□ 0.22
LINC02028-213ENST00000599735 U2AF1L5P0DN76 240 aaPredicted RBP16.41■□□□□ 0.22
LINC02028-213ENST00000599735 PPP2R1AP30153 589 aa16.41■□□□□ 0.22
LINC02028-213ENST00000599735 HTRA3P83110 453 aa16.41■□□□□ 0.22
LINC02028-213ENST00000599735 U2AF1Q01081 240 aaKnown RBP eCLIP16.41■□□□□ 0.22
LINC02028-213ENST00000599735 TPTE2Q6XPS3 522 aa16.41■□□□□ 0.22
LINC02028-213ENST00000599735 ANKRD31Q8N7Z5 1873 aa16.41■□□□□ 0.22
LINC02028-213ENST00000599735 PRPF40BQ6NWY9 871 aaKnown RBP16.4■□□□□ 0.22
LINC02028-213ENST00000599735 C7orf43Q8WVR3 580 aa16.4■□□□□ 0.22
LINC02028-213ENST00000599735 FER1L6Q2WGJ9 1857 aa16.39■□□□□ 0.22
LINC02028-213ENST00000599735 NPR1P16066 1061 aa16.39■□□□□ 0.21
LINC02028-213ENST00000599735 TAF7Q15545 349 aaPredicted RBP16.39■□□□□ 0.21
LINC02028-213ENST00000599735 NBPF5PQ86XG9 351 aaPredicted RBP16.39■□□□□ 0.21
LINC02028-213ENST00000599735 CCDC88AQ3V6T2 1871 aa16.38■□□□□ 0.21
LINC02028-213ENST00000599735 CNGB1Q14028 1251 aaPredicted RBP16.38■□□□□ 0.21
LINC02028-213ENST00000599735 MCM10Q7L590 875 aa16.38■□□□□ 0.21
LINC02028-213ENST00000599735 CCDC24Q8N4L8 307 aa16.38■□□□□ 0.21
LINC02028-213ENST00000599735 DICER1Q9UPY3 1922 aaKnown RBP16.37■□□□□ 0.21
LINC02028-213ENST00000599735 NBPF26B4DH59 902 aa16.37■□□□□ 0.21
LINC02028-213ENST00000599735 NBPF10Q6P3W6 841 aaKnown RBP16.37■□□□□ 0.21
LINC02028-213ENST00000599735 NBPF15Q8N660 670 aa16.37■□□□□ 0.21
LINC02028-213ENST00000599735 PNISRQ8TF01 805 aaKnown RBP16.37■□□□□ 0.21
LINC02028-213ENST00000599735 IQCA1LA6NCM1 817 aa16.36■□□□□ 0.21
LINC02028-213ENST00000599735 CCDC93Q567U6 631 aa16.36■□□□□ 0.21
LINC02028-213ENST00000599735 CHADLQ6NUI6 762 aa16.36■□□□□ 0.21
LINC02028-213ENST00000599735 L3MBTL3Q96JM7 780 aaPredicted RBP16.36■□□□□ 0.21
LINC02028-213ENST00000599735 ZNF219Q9P2Y4 722 aaPredicted RBP16.36■□□□□ 0.21
LINC02028-213ENST00000599735 TIAM2Q8IVF5 1701 aa16.36■□□□□ 0.21
LINC02028-213ENST00000599735 PRAMEF22A3QJZ6 481 aa16.35■□□□□ 0.21
LINC02028-213ENST00000599735 ERVV-1B6SEH8 477 aa16.35■□□□□ 0.21
LINC02028-213ENST00000599735 NEFMP07197 916 aa16.35■□□□□ 0.21
LINC02028-213ENST00000599735 ALDH1B1P30837 517 aa16.35■□□□□ 0.21
LINC02028-213ENST00000599735 RTKN2Q8IZC4 609 aa16.35■□□□□ 0.21
LINC02028-213ENST00000599735 CREBZFQ9NS37 354 aa16.35■□□□□ 0.21
LINC02028-213ENST00000599735 NIP7Q9Y221 180 aaKnown RBP eCLIP16.35■□□□□ 0.21
LINC02028-213ENST00000599735 BCORQ6W2J9 1755 aa16.35■□□□□ 0.21
LINC02028-213ENST00000599735 SLX4Q8IY92 1834 aa16.35■□□□□ 0.21
LINC02028-213ENST00000599735 COL11A2P13942 1736 aaPredicted RBP16.34■□□□□ 0.21
LINC02028-213ENST00000599735 DDNO94850 711 aaPredicted RBP16.34■□□□□ 0.21
LINC02028-213ENST00000599735 FKBP4Q02790 459 aaKnown RBP eCLIP16.34■□□□□ 0.21
LINC02028-213ENST00000599735 COL13A1Q5TAT6 717 aaPredicted RBP16.34■□□□□ 0.21
LINC02028-213ENST00000599735 PIP4K2AP48426 406 aaPredicted RBP16.33■□□□□ 0.2
LINC02028-213ENST00000599735 DCTN1Q14203 1278 aa16.33■□□□□ 0.2
LINC02028-213ENST00000599735 CC2D2BQ6DHV5 1058 aa16.33■□□□□ 0.2
LINC02028-213ENST00000599735 ARFGEF2Q9Y6D5 1785 aa16.33■□□□□ 0.2
LINC02028-213ENST00000599735 CRY2Q49AN0 593 aa16.32■□□□□ 0.2
LINC02028-213ENST00000599735 GRIPAP1Q4V328 841 aa16.32■□□□□ 0.2
LINC02028-213ENST00000599735 LDHDQ86WU2 507 aa16.32■□□□□ 0.2
LINC02028-213ENST00000599735 NYXQ9GZU5 481 aa16.32■□□□□ 0.2
LINC02028-213ENST00000599735 PNNQ9H307 717 aaKnown RBP16.32■□□□□ 0.2
LINC02028-213ENST00000599735 GTF2E1P29083 439 aaPredicted RBP16.3■□□□□ 0.2
LINC02028-213ENST00000599735 HLFQ16534 295 aa16.3■□□□□ 0.2
LINC02028-213ENST00000599735 PSMD1Q99460 953 aa16.3■□□□□ 0.2
LINC02028-213ENST00000599735 TAF1DQ9H5J8 278 aaPredicted RBP16.3■□□□□ 0.2
LINC02028-213ENST00000599735 ERBB4Q15303 1308 aa16.29■□□□□ 0.2
LINC02028-213ENST00000599735 FZD9O00144 591 aa16.29■□□□□ 0.2
LINC02028-213ENST00000599735 HSPA1AP0DMV8 641 aaKnown RBP16.29■□□□□ 0.2
LINC02028-213ENST00000599735 HSPA1BP0DMV9 641 aaKnown RBP16.29■□□□□ 0.2
LINC02028-213ENST00000599735 HOXA10P31260 410 aaPredicted RBP16.29■□□□□ 0.2
LINC02028-213ENST00000599735 PLEKHF1Q96S99 279 aa16.29■□□□□ 0.2
LINC02028-213ENST00000599735 IBTKQ9P2D0 1353 aaPredicted RBP16.28■□□□□ 0.2
LINC02028-213ENST00000599735 MAP3K15Q6ZN16 1313 aa16.28■□□□□ 0.2
LINC02028-213ENST00000599735 PASKQ96RG2 1323 aa16.28■□□□□ 0.2
LINC02028-213ENST00000599735 EIF4A1P60842 406 aaKnown RBP16.28■□□□□ 0.2
LINC02028-213ENST00000599735 PNMA8AQ86V59 439 aaPredicted RBP16.28■□□□□ 0.2
LINC02028-213ENST00000599735 TNS4Q8IZW8 715 aa16.28■□□□□ 0.2
LINC02028-213ENST00000599735 SCN4AP35499 1836 aa16.28■□□□□ 0.2
LINC02028-213ENST00000599735 RIC1Q4ADV7 1423 aa16.28■□□□□ 0.2
LINC02028-213ENST00000599735 IARSP41252 1262 aaKnown RBP16.27■□□□□ 0.2
LINC02028-213ENST00000599735 NFE2L2Q16236 605 aa16.27■□□□□ 0.2
LINC02028-213ENST00000599735 MIS18AQ9NYP9 233 aa16.27■□□□□ 0.2
LINC02028-213ENST00000599735 HACL1Q9UJ83 578 aa16.27■□□□□ 0.2
LINC02028-213ENST00000599735 ITGBL1O95965 494 aaPredicted RBP16.26■□□□□ 0.19
LINC02028-213ENST00000599735 POTEIP0CG38 1075 aa16.26■□□□□ 0.19
LINC02028-213ENST00000599735 POTEJP0CG39 1038 aa16.26■□□□□ 0.19
LINC02028-213ENST00000599735 KIF6Q6ZMV9 814 aa16.26■□□□□ 0.19
LINC02028-213ENST00000599735 GPC2Q8N158 579 aa16.26■□□□□ 0.19
LINC02028-213ENST00000599735 SYNE4Q8N205 404 aa16.26■□□□□ 0.19
LINC02028-213ENST00000599735 ZNF277Q9NRM2 450 aaPredicted RBP16.26■□□□□ 0.19
LINC02028-213ENST00000599735 BABAM1Q9NWV8 329 aa16.26■□□□□ 0.19
LINC02028-213ENST00000599735 JDP2Q8WYK2 163 aa16.25■□□□□ 0.19
LINC02028-213ENST00000599735 CRAMP1Q96RY5 1269 aa16.25■□□□□ 0.19
LINC02028-213ENST00000599735 SNED1Q8TER0 1413 aa16.25■□□□□ 0.19
LINC02028-213ENST00000599735 CNTNAP1P78357 1384 aa16.25■□□□□ 0.19
LINC02028-213ENST00000599735 TMEM88BA6NKF7 163 aa16.24■□□□□ 0.19
LINC02028-213ENST00000599735 EPHX2P34913 555 aa16.24■□□□□ 0.19
LINC02028-213ENST00000599735 GIGYF2Q6Y7W6 1299 aaKnown RBP16.24■□□□□ 0.19
LINC02028-213ENST00000599735 ZNF34Q8IZ26 560 aa16.24■□□□□ 0.19
LINC02028-213ENST00000599735 VPS33BQ9H267 617 aa16.24■□□□□ 0.19
LINC02028-213ENST00000599735 RRP7AQ9Y3A4 280 aaKnown RBP16.24■□□□□ 0.19
LINC02028-213ENST00000599735 PCNTO95613 3336 aa16.24■□□□□ 0.19
LINC02028-213ENST00000599735 ZNF541Q9H0D2 1346 aa16.23■□□□□ 0.19
LINC02028-213ENST00000599735 FAM177BA6PVY3 158 aa16.23■□□□□ 0.19
LINC02028-213ENST00000599735 PARP10Q53GL7 1025 aa16.23■□□□□ 0.19
LINC02028-213ENST00000599735 MKRN1Q9UHC7 482 aaKnown RBP16.23■□□□□ 0.19
LINC02028-213ENST00000599735 LAMB4A4D0S4 1761 aa16.23■□□□□ 0.19
LINC02028-213ENST00000599735 SLC10A5Q5PT55 438 aa16.22■□□□□ 0.19
LINC02028-213ENST00000599735 OLFM4Q6UX06 510 aa16.22■□□□□ 0.19
LINC02028-213ENST00000599735 TTLL7Q6ZT98 887 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms