RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 PSMD1Q99460 953 aa13.65□□□□□ -0.22
SCN8A-208ENST00000599343 CEP135Q66GS9 1140 aa13.65□□□□□ -0.22
SCN8A-208ENST00000599343 CCDC150Q8NCX0 1101 aa13.65□□□□□ -0.22
SCN8A-208ENST00000599343 CUL5Q93034 780 aa13.65□□□□□ -0.22
SCN8A-208ENST00000599343 NAA15Q9BXJ9 866 aaKnown RBP13.65□□□□□ -0.22
SCN8A-208ENST00000599343 JADE2Q9NQC1 790 aa13.65□□□□□ -0.22
SCN8A-208ENST00000599343 POTEB2H3BUK9 544 aa13.65□□□□□ -0.22
SCN8A-208ENST00000599343 SLC4A8Q2Y0W8 1093 aa13.65□□□□□ -0.22
SCN8A-208ENST00000599343 MYO1BO43795 1136 aa13.65□□□□□ -0.22
SCN8A-208ENST00000599343 AQRO60306 1485 aaKnown RBP eCLIP13.65□□□□□ -0.22
SCN8A-208ENST00000599343 NEMFO60524 1076 aa13.64□□□□□ -0.23
SCN8A-208ENST00000599343 IDEP14735 1019 aa13.64□□□□□ -0.23
SCN8A-208ENST00000599343 CCDC12Q8WUD4 166 aaPredicted RBP13.64□□□□□ -0.23
SCN8A-208ENST00000599343 TAOK3Q9H2K8 898 aa13.64□□□□□ -0.23
SCN8A-208ENST00000599343 STX6O43752 255 aa13.64□□□□□ -0.23
SCN8A-208ENST00000599343 RNF216Q9NWF9 866 aaPredicted RBP13.64□□□□□ -0.23
SCN8A-208ENST00000599343 THEMISQ8N1K5 641 aaPredicted RBP13.64□□□□□ -0.23
SCN8A-208ENST00000599343 DNAI2Q9GZS0 605 aa13.64□□□□□ -0.23
SCN8A-208ENST00000599343 ATAD2Q6PL18 1390 aa13.64□□□□□ -0.23
SCN8A-208ENST00000599343 COMMD10Q9Y6G5 202 aa13.64□□□□□ -0.23
SCN8A-208ENST00000599343 IFIT5Q13325 482 aaKnown RBP13.64□□□□□ -0.23
SCN8A-208ENST00000599343 TSHZ3Q63HK5 1081 aa13.64□□□□□ -0.23
SCN8A-208ENST00000599343 CATIPQ7Z7H3 387 aa13.64□□□□□ -0.23
SCN8A-208ENST00000599343 FERMT2Q96AC1 680 aa13.64□□□□□ -0.23
SCN8A-208ENST00000599343 ZNF830Q96NB3 372 aaPredicted RBP13.64□□□□□ -0.23
SCN8A-208ENST00000599343 MMRN2Q9H8L6 949 aa13.64□□□□□ -0.23
SCN8A-208ENST00000599343 VAT1LQ9HCJ6 419 aa13.64□□□□□ -0.23
SCN8A-208ENST00000599343 PRC1O43663 620 aa13.63□□□□□ -0.23
SCN8A-208ENST00000599343 SLC5A1P13866 664 aa13.63□□□□□ -0.23
SCN8A-208ENST00000599343 GNG11P61952 73 aa13.63□□□□□ -0.23
SCN8A-208ENST00000599343 NUDT16Q96DE0 195 aaKnown RBP13.63□□□□□ -0.23
SCN8A-208ENST00000599343 HAND2P61296 217 aa13.63□□□□□ -0.23
SCN8A-208ENST00000599343 SRRTQ9BXP5 876 aaKnown RBP13.63□□□□□ -0.23
SCN8A-208ENST00000599343 HOMER2Q9NSB8 354 aa13.63□□□□□ -0.23
SCN8A-208ENST00000599343 USP16Q9Y5T5 823 aa13.63□□□□□ -0.23
SCN8A-208ENST00000599343 ALDH1L2Q3SY69 923 aa13.63□□□□□ -0.23
SCN8A-208ENST00000599343 GIGYF2Q6Y7W6 1299 aaKnown RBP13.63□□□□□ -0.23
SCN8A-208ENST00000599343 TMOD3Q9NYL9 352 aa13.63□□□□□ -0.23
SCN8A-208ENST00000599343 CALML4Q96GE6 196 aa13.62□□□□□ -0.23
SCN8A-208ENST00000599343 WDR97A6NE52 1622 aa13.62□□□□□ -0.23
SCN8A-208ENST00000599343 A0A087WZG4 1122 aa13.62□□□□□ -0.23
SCN8A-208ENST00000599343 WDR78Q5VTH9 848 aa13.62□□□□□ -0.23
SCN8A-208ENST00000599343 TBC1D9Q6ZT07 1266 aa13.62□□□□□ -0.23
SCN8A-208ENST00000599343 DRC1Q96MC2 740 aa13.62□□□□□ -0.23
SCN8A-208ENST00000599343 PUF60Q9UHX1 559 aaKnown RBP13.62□□□□□ -0.23
SCN8A-208ENST00000599343 ZNF165P49910 485 aa13.62□□□□□ -0.23
SCN8A-208ENST00000599343 PIP4K2BP78356 416 aa13.62□□□□□ -0.23
SCN8A-208ENST00000599343 GOLIM4O00461 696 aa13.62□□□□□ -0.23
SCN8A-208ENST00000599343 KIF20AO95235 890 aa13.62□□□□□ -0.23
SCN8A-208ENST00000599343 NKTRP30414 1462 aaKnown RBP13.62□□□□□ -0.23
SCN8A-208ENST00000599343 FSD2A1L4K1 749 aa13.62□□□□□ -0.23
SCN8A-208ENST00000599343 BAG4O95429 457 aaKnown RBP13.62□□□□□ -0.23
SCN8A-208ENST00000599343 MYCNP04198 464 aaPredicted RBP13.62□□□□□ -0.23
SCN8A-208ENST00000599343 GIMAP6Q6P9H5 292 aa13.62□□□□□ -0.23
SCN8A-208ENST00000599343 PUS7Q96PZ0 661 aaKnown RBP13.62□□□□□ -0.23
SCN8A-208ENST00000599343 TMEM67Q5HYA8 995 aa13.61□□□□□ -0.23
SCN8A-208ENST00000599343 TTC16Q8NEE8 873 aa13.61□□□□□ -0.23
SCN8A-208ENST00000599343 TRMT112Q9UI30 125 aaKnown RBP13.61□□□□□ -0.23
SCN8A-208ENST00000599343 ZNF652Q9Y2D9 606 aa13.61□□□□□ -0.23
SCN8A-208ENST00000599343 ZPR1O75312 459 aa13.61□□□□□ -0.23
SCN8A-208ENST00000599343 ZSCAN23Q3MJ62 389 aa13.61□□□□□ -0.23
SCN8A-208ENST00000599343 DNAAF4Q8WXU2 420 aa13.61□□□□□ -0.23
SCN8A-208ENST00000599343 SPECC1LQ69YQ0 1117 aa13.61□□□□□ -0.23
SCN8A-208ENST00000599343 MPRIPQ6WCQ1 1025 aa13.61□□□□□ -0.23
SCN8A-208ENST00000599343 MICU3Q86XE3 530 aa13.61□□□□□ -0.23
SCN8A-208ENST00000599343 RNF41Q9H4P4 317 aaPredicted RBP13.61□□□□□ -0.23
SCN8A-208ENST00000599343 HSP90AA4PQ58FG1 418 aa13.61□□□□□ -0.23
SCN8A-208ENST00000599343 CEP112Q8N8E3 955 aa13.61□□□□□ -0.23
SCN8A-208ENST00000599343 HSF2BPO75031 334 aa13.61□□□□□ -0.23
SCN8A-208ENST00000599343 IARSP41252 1262 aaKnown RBP13.61□□□□□ -0.23
SCN8A-208ENST00000599343 SNRKQ9NRH2 765 aa13.61□□□□□ -0.23
SCN8A-208ENST00000599343 BMS1Q14692 1282 aaKnown RBP13.6□□□□□ -0.23
SCN8A-208ENST00000599343 PPM1EQ8WY54 764 aa13.6□□□□□ -0.23
SCN8A-208ENST00000599343 SLC26A6Q9BXS9 759 aa13.6□□□□□ -0.23
SCN8A-208ENST00000599343 TCP11L1Q9NUJ3 509 aa13.6□□□□□ -0.23
SCN8A-208ENST00000599343 EVI5LQ96CN4 794 aa13.6□□□□□ -0.23
SCN8A-208ENST00000599343 ZNF219Q9P2Y4 722 aaPredicted RBP13.6□□□□□ -0.23
SCN8A-208ENST00000599343 HCLS1P14317 486 aaPredicted RBP13.6□□□□□ -0.23
SCN8A-208ENST00000599343 SYCP3Q8IZU3 236 aa13.6□□□□□ -0.23
SCN8A-208ENST00000599343 ORC3Q9UBD5 711 aaPredicted RBP13.6□□□□□ -0.23
SCN8A-208ENST00000599343 AMPD3Q01432 767 aa13.6□□□□□ -0.23
SCN8A-208ENST00000599343 CETN1Q12798 172 aa13.6□□□□□ -0.23
SCN8A-208ENST00000599343 ZBTB9Q96C00 473 aa13.6□□□□□ -0.23
SCN8A-208ENST00000599343 SYNJ2O15056 1496 aa13.59□□□□□ -0.23
SCN8A-208ENST00000599343 ANKRD18BA2A2Z9 1011 aa13.59□□□□□ -0.23
SCN8A-208ENST00000599343 FAM114A1Q8IWE2 563 aa13.59□□□□□ -0.23
SCN8A-208ENST00000599343 POLA1P09884 1462 aaPredicted RBP13.59□□□□□ -0.23
SCN8A-208ENST00000599343 GPTP24298 496 aa13.59□□□□□ -0.23
SCN8A-208ENST00000599343 ERICH3Q5RHP9 1530 aa13.59□□□□□ -0.23
SCN8A-208ENST00000599343 GOLGA6L9A6NEM1 432 aa13.59□□□□□ -0.23
SCN8A-208ENST00000599343 METAP2P50579 478 aaKnown RBP eCLIP13.59□□□□□ -0.23
SCN8A-208ENST00000599343 WAPLQ7Z5K2 1190 aa13.59□□□□□ -0.23
SCN8A-208ENST00000599343 TRIM47Q96LD4 638 aa13.59□□□□□ -0.23
SCN8A-208ENST00000599343 TRIM27P14373 513 aa13.58□□□□□ -0.23
SCN8A-208ENST00000599343 UBE2HP62256 183 aa13.58□□□□□ -0.23
SCN8A-208ENST00000599343 N4BP3O15049 544 aa13.58□□□□□ -0.24
SCN8A-208ENST00000599343 PAIP2Q9BPZ3 127 aaKnown RBP13.58□□□□□ -0.24
SCN8A-208ENST00000599343 EHMT1Q9H9B1 1298 aa13.58□□□□□ -0.24
SCN8A-208ENST00000599343 CCDC102BQ68D86 513 aa13.58□□□□□ -0.24
SCN8A-208ENST00000599343 NME9Q86XW9 330 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms