RNA–Protein interactions for RNA: ENST00000599227.5

ZNF544-213, Transcript of zinc finger protein 544, humanhuman

TSL 1 (best) BASIC

Gene ZNF544, Length 3,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-213ENST00000599227 PPP1R9BQ96SB3 815 aa13.45□□□□□ -0.26
ZNF544-213ENST00000599227 CPSF1Q10570 1443 aaKnown RBP13.44□□□□□ -0.26
ZNF544-213ENST00000599227 NEURL4Q96JN8 1562 aa13.44□□□□□ -0.26
ZNF544-213ENST00000599227 GCP02774 474 aa13.44□□□□□ -0.26
ZNF544-213ENST00000599227 ATP2B1P20020 1258 aa13.44□□□□□ -0.26
ZNF544-213ENST00000599227 ATP7BP35670 1465 aa13.44□□□□□ -0.26
ZNF544-213ENST00000599227 CABP4P57796 275 aa13.44□□□□□ -0.26
ZNF544-213ENST00000599227 SLFNL1Q499Z3 407 aa13.44□□□□□ -0.26
ZNF544-213ENST00000599227 COPS6Q7L5N1 327 aa13.44□□□□□ -0.26
ZNF544-213ENST00000599227 NEO1Q92859 1461 aa13.44□□□□□ -0.26
ZNF544-213ENST00000599227 CDK12Q9NYV4 1490 aaPredicted RBP13.44□□□□□ -0.26
ZNF544-213ENST00000599227 USP32Q8NFA0 1604 aa13.44□□□□□ -0.26
ZNF544-213ENST00000599227 BRD1O95696 1058 aa13.43□□□□□ -0.26
ZNF544-213ENST00000599227 DNM1Q05193 864 aaKnown RBP13.43□□□□□ -0.26
ZNF544-213ENST00000599227 SLC4A8Q2Y0W8 1093 aa13.43□□□□□ -0.26
ZNF544-213ENST00000599227 ZMYND15Q9H091 742 aa13.43□□□□□ -0.26
ZNF544-213ENST00000599227 AATKQ6ZMQ8 1374 aa13.43□□□□□ -0.26
ZNF544-213ENST00000599227 LARGE1O95461 756 aa13.43□□□□□ -0.26
ZNF544-213ENST00000599227 KIAA2012Q0VF49 1180 aa13.43□□□□□ -0.26
ZNF544-213ENST00000599227 DDX46Q7L014 1031 aaKnown RBP13.43□□□□□ -0.26
ZNF544-213ENST00000599227 PRDM10Q9NQV6 1147 aa13.43□□□□□ -0.26
ZNF544-213ENST00000599227 WDR33Q9C0J8 1336 aaKnown RBP13.43□□□□□ -0.26
ZNF544-213ENST00000599227 A0A0U1RQG5 324 aaPredicted RBP13.42□□□□□ -0.26
ZNF544-213ENST00000599227 RRP9O43818 475 aaKnown RBP13.42□□□□□ -0.26
ZNF544-213ENST00000599227 XAGE3Q8WTP9 111 aa13.42□□□□□ -0.26
ZNF544-213ENST00000599227 RGS12O14924 1447 aa13.42□□□□□ -0.26
ZNF544-213ENST00000599227 CHGBP05060 677 aa13.42□□□□□ -0.26
ZNF544-213ENST00000599227 PIP4K2BP78356 416 aa13.42□□□□□ -0.26
ZNF544-213ENST00000599227 ADCK5Q3MIX3 580 aa13.42□□□□□ -0.26
ZNF544-213ENST00000599227 CCDC82Q8N4S0 544 aa13.42□□□□□ -0.26
ZNF544-213ENST00000599227 TMEM131LA2VDJ0 1609 aa13.42□□□□□ -0.26
ZNF544-213ENST00000599227 OFD1O75665 1012 aa13.42□□□□□ -0.26
ZNF544-213ENST00000599227 GJB2P29033 226 aa13.42□□□□□ -0.26
ZNF544-213ENST00000599227 MCM2P49736 904 aa13.42□□□□□ -0.26
ZNF544-213ENST00000599227 PTH1RQ03431 593 aa13.42□□□□□ -0.26
ZNF544-213ENST00000599227 CREBRFQ8IUR6 639 aa13.42□□□□□ -0.26
ZNF544-213ENST00000599227 CKAP2LQ8IYA6 745 aa13.42□□□□□ -0.26
ZNF544-213ENST00000599227 CCDC39Q9UFE4 941 aa13.42□□□□□ -0.26
ZNF544-213ENST00000599227 SNX14Q9Y5W7 946 aa13.42□□□□□ -0.26
ZNF544-213ENST00000599227 SYT1P21579 422 aa13.41□□□□□ -0.26
ZNF544-213ENST00000599227 HAND2P61296 217 aa13.41□□□□□ -0.26
ZNF544-213ENST00000599227 BICDL1Q6ZP65 573 aa13.41□□□□□ -0.26
ZNF544-213ENST00000599227 ZBTB9Q96C00 473 aa13.41□□□□□ -0.26
ZNF544-213ENST00000599227 IQSEC3Q9UPP2 1182 aaPredicted RBP13.41□□□□□ -0.26
ZNF544-213ENST00000599227 STX6O43752 255 aa13.41□□□□□ -0.26
ZNF544-213ENST00000599227 KIF1BPQ96EK5 621 aa13.41□□□□□ -0.26
ZNF544-213ENST00000599227 PDRG1Q9NUG6 133 aa13.41□□□□□ -0.26
ZNF544-213ENST00000599227 ZKSCAN5Q9Y2L8 839 aa13.41□□□□□ -0.26
ZNF544-213ENST00000599227 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.41□□□□□ -0.26
ZNF544-213ENST00000599227 ADCY5O95622 1261 aa13.41□□□□□ -0.26
ZNF544-213ENST00000599227 TPM2P07951 284 aa13.41□□□□□ -0.26
ZNF544-213ENST00000599227 TATP17735 454 aaPredicted RBP13.41□□□□□ -0.26
ZNF544-213ENST00000599227 SRCAPQ6ZRS2 3230 aa13.4□□□□□ -0.26
ZNF544-213ENST00000599227 FLT4P35916 1363 aa13.4□□□□□ -0.26
ZNF544-213ENST00000599227 KIAA0232Q92628 1395 aa13.4□□□□□ -0.26
ZNF544-213ENST00000599227 CCDC129Q6ZRS4 1044 aa13.4□□□□□ -0.26
ZNF544-213ENST00000599227 FAM227BQ96M60 508 aa13.4□□□□□ -0.26
ZNF544-213ENST00000599227 FMNL2Q96PY5 1086 aa13.4□□□□□ -0.26
ZNF544-213ENST00000599227 A0A087WZG4 1122 aa13.4□□□□□ -0.26
ZNF544-213ENST00000599227 GPATCH3Q96I76 525 aa13.4□□□□□ -0.26
ZNF544-213ENST00000599227 PIBF1Q8WXW3 757 aa13.4□□□□□ -0.27
ZNF544-213ENST00000599227 GTF2E1P29083 439 aaPredicted RBP13.39□□□□□ -0.27
ZNF544-213ENST00000599227 ZNF594Q96JF6 807 aaPredicted RBP13.39□□□□□ -0.27
ZNF544-213ENST00000599227 NOL7Q9UMY1 257 aaKnown RBP13.39□□□□□ -0.27
ZNF544-213ENST00000599227 LARP1BQ659C4 914 aaKnown RBP13.39□□□□□ -0.27
ZNF544-213ENST00000599227 RUFY3Q7L099 469 aa13.39□□□□□ -0.27
ZNF544-213ENST00000599227 CRB1P82279 1406 aa13.39□□□□□ -0.27
ZNF544-213ENST00000599227 PLEKHG3A1L390 1219 aa13.38□□□□□ -0.27
ZNF544-213ENST00000599227 H3BQV1 296 aa13.38□□□□□ -0.27
ZNF544-213ENST00000599227 DDX58O95786 925 aaKnown RBP13.38□□□□□ -0.27
ZNF544-213ENST00000599227 ZKSCAN1P17029 563 aaPredicted RBP13.38□□□□□ -0.27
ZNF544-213ENST00000599227 CCT2P78371 535 aaKnown RBP13.38□□□□□ -0.27
ZNF544-213ENST00000599227 COL9A3Q14050 684 aaPredicted RBP13.38□□□□□ -0.27
ZNF544-213ENST00000599227 IFFO2Q5TF58 517 aa13.38□□□□□ -0.27
ZNF544-213ENST00000599227 CCDC24Q8N4L8 307 aa13.38□□□□□ -0.27
ZNF544-213ENST00000599227 LIMCH1Q9UPQ0 1083 aa13.38□□□□□ -0.27
ZNF544-213ENST00000599227 IBTKQ9P2D0 1353 aaPredicted RBP13.38□□□□□ -0.27
ZNF544-213ENST00000599227 RAB11FIP3O75154 756 aa13.38□□□□□ -0.27
ZNF544-213ENST00000599227 PHF14O94880 888 aa13.38□□□□□ -0.27
ZNF544-213ENST00000599227 HELBQ8NG08 1087 aaPredicted RBP13.38□□□□□ -0.27
ZNF544-213ENST00000599227 USP16Q9Y5T5 823 aa13.38□□□□□ -0.27
ZNF544-213ENST00000599227 PREX1Q8TCU6 1659 aa13.38□□□□□ -0.27
ZNF544-213ENST00000599227 SGSM2O43147 1006 aa13.38□□□□□ -0.27
ZNF544-213ENST00000599227 ZSCAN22P10073 491 aaPredicted RBP13.38□□□□□ -0.27
ZNF544-213ENST00000599227 KCNQ4P56696 695 aa13.38□□□□□ -0.27
ZNF544-213ENST00000599227 OSBPL3Q9H4L5 887 aa13.38□□□□□ -0.27
ZNF544-213ENST00000599227 AXIN2Q9Y2T1 843 aa13.38□□□□□ -0.27
ZNF544-213ENST00000599227 TIMM10P62072 90 aa13.37□□□□□ -0.27
ZNF544-213ENST00000599227 CYP46A1Q9Y6A2 500 aa13.37□□□□□ -0.27
ZNF544-213ENST00000599227 KNDC1Q76NI1 1749 aa13.37□□□□□ -0.27
ZNF544-213ENST00000599227 A1BGP04217 495 aa13.37□□□□□ -0.27
ZNF544-213ENST00000599227 HSPA4P34932 840 aa13.37□□□□□ -0.27
ZNF544-213ENST00000599227 RRP12Q5JTH9 1297 aaKnown RBP13.37□□□□□ -0.27
ZNF544-213ENST00000599227 BICD2Q8TD16 824 aa13.37□□□□□ -0.27
ZNF544-213ENST00000599227 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.37□□□□□ -0.27
ZNF544-213ENST00000599227 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.37□□□□□ -0.27
ZNF544-213ENST00000599227 USP6P35125 1406 aa13.37□□□□□ -0.27
ZNF544-213ENST00000599227 FAM184AQ8NB25 1140 aa13.37□□□□□ -0.27
ZNF544-213ENST00000599227 ACSBG1Q96GR2 724 aa13.37□□□□□ -0.27
ZNF544-213ENST00000599227 GNL2Q13823 731 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms