RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 PDE6BP35913 854 aa19.59■□□□□ 0.73
IRF3-223ENST00000599223 ZEB1P37275 1124 aaPredicted RBP19.59■□□□□ 0.73
IRF3-223ENST00000599223 IFFO2Q5TF58 517 aa19.59■□□□□ 0.73
IRF3-223ENST00000599223 SETDB2Q96T68 719 aa19.59■□□□□ 0.73
IRF3-223ENST00000599223 FSTL1Q12841 308 aa19.58■□□□□ 0.72
IRF3-223ENST00000599223 RTF1Q92541 710 aaKnown RBP19.58■□□□□ 0.72
IRF3-223ENST00000599223 GLTPD2A6NH11 291 aa19.57■□□□□ 0.72
IRF3-223ENST00000599223 SNRPA1P09661 255 aaKnown RBP19.57■□□□□ 0.72
IRF3-223ENST00000599223 SRGNP10124 158 aa19.56■□□□□ 0.72
IRF3-223ENST00000599223 PRPF40BQ6NWY9 871 aaKnown RBP19.56■□□□□ 0.72
IRF3-223ENST00000599223 MIS18AQ9NYP9 233 aa19.56■□□□□ 0.72
IRF3-223ENST00000599223 NUP98P52948 1817 aa19.55■□□□□ 0.72
IRF3-223ENST00000599223 ST5P78524 1137 aa19.55■□□□□ 0.72
IRF3-223ENST00000599223 PDZRN3Q9UPQ7 1066 aa19.55■□□□□ 0.72
IRF3-223ENST00000599223 POTECB2RU33 542 aa19.54■□□□□ 0.72
IRF3-223ENST00000599223 HTATSF1O43719 755 aaKnown RBP19.54■□□□□ 0.72
IRF3-223ENST00000599223 STYK1Q6J9G0 422 aa19.54■□□□□ 0.72
IRF3-223ENST00000599223 NPM2Q86SE8 214 aaKnown RBP19.54■□□□□ 0.72
IRF3-223ENST00000599223 LTBP3Q9NS15 1303 aa19.53■□□□□ 0.72
IRF3-223ENST00000599223 NPHP1O15259 732 aa19.53■□□□□ 0.72
IRF3-223ENST00000599223 NBPF5PQ86XG9 351 aaPredicted RBP19.53■□□□□ 0.72
IRF3-223ENST00000599223 SMC1BQ8NDV3 1235 aa19.53■□□□□ 0.72
IRF3-223ENST00000599223 THUMPD2Q9BTF0 503 aaKnown RBP19.53■□□□□ 0.72
IRF3-223ENST00000599223 VEGFAP15692 232 aaPredicted RBP19.52■□□□□ 0.72
IRF3-223ENST00000599223 CLEC4GQ6UXB4 293 aa19.52■□□□□ 0.72
IRF3-223ENST00000599223 KLRG1Q96E93 195 aa19.52■□□□□ 0.72
IRF3-223ENST00000599223 PLEKHF1Q96S99 279 aa19.52■□□□□ 0.72
IRF3-223ENST00000599223 TAOK3Q9H2K8 898 aa19.52■□□□□ 0.72
IRF3-223ENST00000599223 TAF7Q15545 349 aaPredicted RBP19.51■□□□□ 0.71
IRF3-223ENST00000599223 HLFQ16534 295 aa19.51■□□□□ 0.71
IRF3-223ENST00000599223 ERFEQ4G0M1 354 aa19.51■□□□□ 0.71
IRF3-223ENST00000599223 CNKSR1Q969H4 720 aa19.51■□□□□ 0.71
IRF3-223ENST00000599223 MASTLQ96GX5 879 aa19.51■□□□□ 0.71
IRF3-223ENST00000599223 ZNF652Q9Y2D9 606 aa19.51■□□□□ 0.71
IRF3-223ENST00000599223 ABCC12Q96J65 1359 aa19.51■□□□□ 0.71
IRF3-223ENST00000599223 NIP7Q9Y221 180 aaKnown RBP eCLIP19.5■□□□□ 0.71
IRF3-223ENST00000599223 FAM177BA6PVY3 158 aa19.49■□□□□ 0.71
IRF3-223ENST00000599223 OLFM4Q6UX06 510 aa19.49■□□□□ 0.71
IRF3-223ENST00000599223 C7orf43Q8WVR3 580 aa19.49■□□□□ 0.71
IRF3-223ENST00000599223 KLRG2A4D1S0 409 aaPredicted RBP19.48■□□□□ 0.71
IRF3-223ENST00000599223 JMYQ8N9B5 988 aa19.48■□□□□ 0.71
IRF3-223ENST00000599223 SNED1Q8TER0 1413 aa19.48■□□□□ 0.71
IRF3-223ENST00000599223 RGL2O15211 777 aa19.47■□□□□ 0.71
IRF3-223ENST00000599223 NFE2L2Q16236 605 aa19.47■□□□□ 0.71
IRF3-223ENST00000599223 POTEIP0CG38 1075 aa19.46■□□□□ 0.71
IRF3-223ENST00000599223 POTEJP0CG39 1038 aa19.46■□□□□ 0.71
IRF3-223ENST00000599223 NPR1P16066 1061 aa19.46■□□□□ 0.71
IRF3-223ENST00000599223 EIF4A1P60842 406 aaKnown RBP19.46■□□□□ 0.71
IRF3-223ENST00000599223 SCN4AP35499 1836 aa19.46■□□□□ 0.71
IRF3-223ENST00000599223 DDNO94850 711 aaPredicted RBP19.45■□□□□ 0.7
IRF3-223ENST00000599223 TTLL7Q6ZT98 887 aa19.45■□□□□ 0.7
IRF3-223ENST00000599223 NGEFQ8N5V2 710 aa19.45■□□□□ 0.7
IRF3-223ENST00000599223 COL4A5P29400 1685 aa19.45■□□□□ 0.7
IRF3-223ENST00000599223 CCDC93Q567U6 631 aa19.44■□□□□ 0.7
IRF3-223ENST00000599223 SOGA3Q5TF21 947 aa19.44■□□□□ 0.7
IRF3-223ENST00000599223 TPTE2Q6XPS3 522 aa19.44■□□□□ 0.7
IRF3-223ENST00000599223 SLC51AQ86UW1 340 aa19.44■□□□□ 0.7
IRF3-223ENST00000599223 UBN2Q6ZU65 1347 aa19.44■□□□□ 0.7
IRF3-223ENST00000599223 ADAMTSL1Q8N6G6 1762 aa19.44■□□□□ 0.7
IRF3-223ENST00000599223 ANKRD36CQ5JPF3 1778 aa19.43■□□□□ 0.7
IRF3-223ENST00000599223 DPY19L2Q6NUT2 758 aa19.43■□□□□ 0.7
IRF3-223ENST00000599223 NUTM1Q86Y26 1132 aa19.43■□□□□ 0.7
IRF3-223ENST00000599223 MAP3K15Q6ZN16 1313 aa19.43■□□□□ 0.7
IRF3-223ENST00000599223 ZNF541Q9H0D2 1346 aa19.43■□□□□ 0.7
IRF3-223ENST00000599223 PNISRQ8TF01 805 aaKnown RBP19.42■□□□□ 0.7
IRF3-223ENST00000599223 ZNF277Q9NRM2 450 aaPredicted RBP19.42■□□□□ 0.7
IRF3-223ENST00000599223 RIC1Q4ADV7 1423 aa19.42■□□□□ 0.7
IRF3-223ENST00000599223 NEFMP07197 916 aa19.41■□□□□ 0.7
IRF3-223ENST00000599223 MYL6BP14649 208 aa19.41■□□□□ 0.7
IRF3-223ENST00000599223 FKBP4Q02790 459 aaKnown RBP eCLIP19.41■□□□□ 0.7
IRF3-223ENST00000599223 CRY2Q49AN0 593 aa19.41■□□□□ 0.7
IRF3-223ENST00000599223 ZBTB3Q9H5J0 574 aa19.41■□□□□ 0.7
IRF3-223ENST00000599223 RRP7AQ9Y3A4 280 aaKnown RBP19.41■□□□□ 0.7
IRF3-223ENST00000599223 MAPK8IP3Q9UPT6 1336 aa19.41■□□□□ 0.7
IRF3-223ENST00000599223 LAMB2P55268 1798 aa19.41■□□□□ 0.7
IRF3-223ENST00000599223 IBTKQ9P2D0 1353 aaPredicted RBP19.41■□□□□ 0.7
IRF3-223ENST00000599223 ERVV-1B6SEH8 477 aa19.4■□□□□ 0.7
IRF3-223ENST00000599223 GPTP24298 496 aa19.4■□□□□ 0.7
IRF3-223ENST00000599223 LRP10Q7Z4F1 713 aa19.39■□□□□ 0.69
IRF3-223ENST00000599223 LTBP1Q14766 1721 aa19.39■□□□□ 0.69
IRF3-223ENST00000599223 KIF6Q6ZMV9 814 aa19.38■□□□□ 0.69
IRF3-223ENST00000599223 C3orf67Q6ZVT6 689 aa19.38■□□□□ 0.69
IRF3-223ENST00000599223 L3MBTL3Q96JM7 780 aaPredicted RBP19.38■□□□□ 0.69
IRF3-223ENST00000599223 PROSER3Q2NL68 480 aa19.37■□□□□ 0.69
IRF3-223ENST00000599223 COL13A1Q5TAT6 717 aaPredicted RBP19.37■□□□□ 0.69
IRF3-223ENST00000599223 SUSD4Q5VX71 490 aa19.37■□□□□ 0.69
IRF3-223ENST00000599223 CHADLQ6NUI6 762 aa19.37■□□□□ 0.69
IRF3-223ENST00000599223 TSPYL4Q9UJ04 414 aa19.37■□□□□ 0.69
IRF3-223ENST00000599223 NTSR2O95665 410 aa19.36■□□□□ 0.69
IRF3-223ENST00000599223 ANXA1P04083 346 aa19.36■□□□□ 0.69
IRF3-223ENST00000599223 GTF2E1P29083 439 aaPredicted RBP19.36■□□□□ 0.69
IRF3-223ENST00000599223 NYXQ9GZU5 481 aa19.36■□□□□ 0.69
IRF3-223ENST00000599223 TAF1DQ9H5J8 278 aaPredicted RBP19.36■□□□□ 0.69
IRF3-223ENST00000599223 ERBB4Q15303 1308 aa19.35■□□□□ 0.69
IRF3-223ENST00000599223 IARSP41252 1262 aaKnown RBP19.35■□□□□ 0.69
IRF3-223ENST00000599223 PDIA6Q15084 440 aa19.35■□□□□ 0.69
IRF3-223ENST00000599223 ZNF34Q8IZ26 560 aa19.35■□□□□ 0.69
IRF3-223ENST00000599223 RTKN2Q8IZC4 609 aa19.35■□□□□ 0.69
IRF3-223ENST00000599223 RIPK4P57078 832 aa19.34■□□□□ 0.69
IRF3-223ENST00000599223 SYNE4Q8N205 404 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms