RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 ZNF330Q9Y3S2 320 aaPredicted RBP29.33■■■□□ 2.29
SYMPK-212ENST00000598896 ALDH1L1O75891 902 aa29.32■■■□□ 2.28
SYMPK-212ENST00000598896 GNAI3P08754 354 aa29.32■■■□□ 2.28
SYMPK-212ENST00000598896 MYH14Q7Z406 1995 aaKnown RBP29.32■■■□□ 2.28
SYMPK-212ENST00000598896 RXRBP28702 533 aa29.31■■■□□ 2.28
SYMPK-212ENST00000598896 MYD88Q99836 296 aa29.31■■■□□ 2.28
SYMPK-212ENST00000598896 LY75O60449 1722 aa29.31■■■□□ 2.28
SYMPK-212ENST00000598896 NBPF7P0C2Y1 421 aaPredicted RBP29.3■■■□□ 2.28
SYMPK-212ENST00000598896 CEP85Q6P2H3 762 aa29.3■■■□□ 2.28
SYMPK-212ENST00000598896 INTS5Q6P9B9 1019 aaKnown RBP29.3■■■□□ 2.28
SYMPK-212ENST00000598896 FAM196AQ6ZSG2 479 aa29.3■■■□□ 2.28
SYMPK-212ENST00000598896 GNAI2P04899 355 aa29.29■■■□□ 2.28
SYMPK-212ENST00000598896 CRKLP46109 303 aaKnown RBP29.29■■■□□ 2.28
SYMPK-212ENST00000598896 KCNQ4P56696 695 aa29.29■■■□□ 2.28
SYMPK-212ENST00000598896 POTEAQ6S8J7 498 aa29.29■■■□□ 2.28
SYMPK-212ENST00000598896 ZBTB3Q9H5J0 574 aa29.29■■■□□ 2.28
SYMPK-212ENST00000598896 AFDNP55196 1824 aaKnown RBP29.29■■■□□ 2.28
SYMPK-212ENST00000598896 BCL11BQ9C0K0 894 aaPredicted RBP29.29■■■□□ 2.28
SYMPK-212ENST00000598896 NEURL1BA8MQ27 555 aa29.28■■■□□ 2.28
SYMPK-212ENST00000598896 UBTFL1P0CB47 393 aaPredicted RBP29.28■■■□□ 2.28
SYMPK-212ENST00000598896 NEXNQ0ZGT2 675 aa29.28■■■□□ 2.28
SYMPK-212ENST00000598896 ANKRD44Q8N8A2 993 aa29.28■■■□□ 2.28
SYMPK-212ENST00000598896 CCDC87Q9NVE4 849 aa29.28■■■□□ 2.28
SYMPK-212ENST00000598896 LRRFIP2Q9Y608 721 aaKnown RBP29.27■■■□□ 2.28
SYMPK-212ENST00000598896 IL6STP40189 918 aaPredicted RBP29.26■■■□□ 2.27
SYMPK-212ENST00000598896 RPAP2Q8IXW5 612 aaPredicted RBP29.26■■■□□ 2.27
SYMPK-212ENST00000598896 LINC00116Q8NCU8 138 aa29.26■■■□□ 2.27
SYMPK-212ENST00000598896 PELP1Q8IZL8 1130 aaKnown RBP29.25■■■□□ 2.27
SYMPK-212ENST00000598896 IBTKQ9P2D0 1353 aaPredicted RBP29.25■■■□□ 2.27
SYMPK-212ENST00000598896 ATP5J2-PTCD1G3V325 749 aa29.25■■■□□ 2.27
SYMPK-212ENST00000598896 SMC5Q8IY18 1101 aa29.25■■■□□ 2.27
SYMPK-212ENST00000598896 EIF5P55010 431 aaKnown RBP29.23■■■□□ 2.27
SYMPK-212ENST00000598896 GCKRQ14397 625 aa29.23■■■□□ 2.27
SYMPK-212ENST00000598896 C9orf78Q9NZ63 289 aaPredicted RBP29.23■■■□□ 2.27
SYMPK-212ENST00000598896 GRM8O00222 908 aa29.23■■■□□ 2.27
SYMPK-212ENST00000598896 UTYO14607 1347 aa29.22■■■□□ 2.27
SYMPK-212ENST00000598896 TRIM37O94972 964 aa29.22■■■□□ 2.27
SYMPK-212ENST00000598896 KIF6Q6ZMV9 814 aa29.22■■■□□ 2.27
SYMPK-212ENST00000598896 MAP3K15Q6ZN16 1313 aa29.22■■■□□ 2.27
SYMPK-212ENST00000598896 CCNL1Q9UK58 526 aaPredicted RBP29.21■■■□□ 2.27
SYMPK-212ENST00000598896 TAF1LQ8IZX4 1826 aa29.21■■■□□ 2.27
SYMPK-212ENST00000598896 ARXQ96QS3 562 aa29.2■■■□□ 2.26
SYMPK-212ENST00000598896 PDZRN3Q9UPQ7 1066 aa29.19■■■□□ 2.26
SYMPK-212ENST00000598896 PNMA6EA0A0J9YXQ4 647 aa29.19■■■□□ 2.26
SYMPK-212ENST00000598896 HLFQ16534 295 aa29.18■■■□□ 2.26
SYMPK-212ENST00000598896 DZIP3Q86Y13 1208 aaKnown RBP29.18■■■□□ 2.26
SYMPK-212ENST00000598896 TBC1D2BQ9UPU7 963 aa29.18■■■□□ 2.26
SYMPK-212ENST00000598896 CNTNAP4Q9C0A0 1308 aa29.18■■■□□ 2.26
SYMPK-212ENST00000598896 ATP8B2P98198 1209 aa29.17■■■□□ 2.26
SYMPK-212ENST00000598896 TCIRG1Q13488 830 aa29.17■■■□□ 2.26
SYMPK-212ENST00000598896 GCC1Q96CN9 775 aa29.17■■■□□ 2.26
SYMPK-212ENST00000598896 NUP98P52948 1817 aa29.16■■■□□ 2.26
SYMPK-212ENST00000598896 GIGYF2Q6Y7W6 1299 aaKnown RBP29.16■■■□□ 2.26
SYMPK-212ENST00000598896 KAZALD1Q96I82 304 aa29.16■■■□□ 2.26
SYMPK-212ENST00000598896 ANKRD36CQ5JPF3 1778 aa29.16■■■□□ 2.26
SYMPK-212ENST00000598896 NPM2Q86SE8 214 aaKnown RBP29.15■■■□□ 2.26
SYMPK-212ENST00000598896 SUCLG2Q96I99 432 aa29.15■■■□□ 2.26
SYMPK-212ENST00000598896 ISCA1Q9BUE6 129 aa29.15■■■□□ 2.26
SYMPK-212ENST00000598896 DCTPP1Q9H773 170 aa29.15■■■□□ 2.26
SYMPK-212ENST00000598896 COL15A1P39059 1388 aa29.15■■■□□ 2.26
SYMPK-212ENST00000598896 HMMRO75330 724 aa29.14■■■□□ 2.26
SYMPK-212ENST00000598896 JARID2Q92833 1246 aaPredicted RBP29.14■■■□□ 2.26
SYMPK-212ENST00000598896 LRRC4BQ9NT99 713 aa29.14■■■□□ 2.26
SYMPK-212ENST00000598896 A0A087WZG4 1122 aa29.13■■■□□ 2.25
SYMPK-212ENST00000598896 C4BP0C0L5 1744 aa29.13■■■□□ 2.25
SYMPK-212ENST00000598896 CWC25Q9NXE8 425 aaPredicted RBP29.13■■■□□ 2.25
SYMPK-212ENST00000598896 ERVV-1B6SEH8 477 aa29.12■■■□□ 2.25
SYMPK-212ENST00000598896 RGS3P49796 1198 aa29.12■■■□□ 2.25
SYMPK-212ENST00000598896 UBE3BQ7Z3V4 1068 aa29.12■■■□□ 2.25
SYMPK-212ENST00000598896 CCDC191Q8NCU4 936 aa29.12■■■□□ 2.25
SYMPK-212ENST00000598896 CASP7P55210 303 aa29.12■■■□□ 2.25
SYMPK-212ENST00000598896 NUCB1Q02818 461 aa29.12■■■□□ 2.25
SYMPK-212ENST00000598896 PPP1R42Q7Z4L9 355 aa29.12■■■□□ 2.25
SYMPK-212ENST00000598896 RC3H1Q5TC82 1133 aaKnown RBP29.11■■■□□ 2.25
SYMPK-212ENST00000598896 SSH3Q8TE77 659 aa29.1■■■□□ 2.25
SYMPK-212ENST00000598896 BICC1Q9H694 974 aaKnown RBP29.1■■■□□ 2.25
SYMPK-212ENST00000598896 BCORQ6W2J9 1755 aa29.1■■■□□ 2.25
SYMPK-212ENST00000598896 CAMTA2O94983 1202 aa29.1■■■□□ 2.25
SYMPK-212ENST00000598896 TRIM28Q13263 835 aaKnown RBP29.1■■■□□ 2.25
SYMPK-212ENST00000598896 MTX1Q13505 466 aa29.1■■■□□ 2.25
SYMPK-212ENST00000598896 SMIM5Q71RC9 77 aa29.1■■■□□ 2.25
SYMPK-212ENST00000598896 H7C1W4 665 aa29.09■■■□□ 2.25
SYMPK-212ENST00000598896 POLA2Q14181 598 aa29.09■■■□□ 2.25
SYMPK-212ENST00000598896 HDAC5Q9UQL6 1122 aa29.09■■■□□ 2.25
SYMPK-212ENST00000598896 SRGAP3O43295 1099 aa29.08■■■□□ 2.25
SYMPK-212ENST00000598896 EPHA10Q5JZY3 1008 aa29.08■■■□□ 2.25
SYMPK-212ENST00000598896 ANKRD45Q5TZF3 282 aa29.08■■■□□ 2.25
SYMPK-212ENST00000598896 AMIGO3Q86WK7 504 aa29.08■■■□□ 2.25
SYMPK-212ENST00000598896 GNPATO15228 680 aa29.07■■■□□ 2.24
SYMPK-212ENST00000598896 GPTP24298 496 aa29.07■■■□□ 2.24
SYMPK-212ENST00000598896 HSP90AB3PQ58FF7 597 aa29.07■■■□□ 2.24
SYMPK-212ENST00000598896 CHD1LQ86WJ1 897 aa29.07■■■□□ 2.24
SYMPK-212ENST00000598896 LNPKQ9C0E8 428 aa29.07■■■□□ 2.24
SYMPK-212ENST00000598896 TNS1Q9HBL0 1735 aaKnown RBP29.07■■■□□ 2.24
SYMPK-212ENST00000598896 RPS6KA4O75676 772 aa29.06■■■□□ 2.24
SYMPK-212ENST00000598896 PDE4AP27815 886 aa29.06■■■□□ 2.24
SYMPK-212ENST00000598896 RTL5Q5HYW3 569 aaPredicted RBP29.06■■■□□ 2.24
SYMPK-212ENST00000598896 NLRP10Q86W26 655 aa29.05■■■□□ 2.24
SYMPK-212ENST00000598896 EXOC6BQ9Y2D4 811 aa29.05■■■□□ 2.24
SYMPK-212ENST00000598896 UBN2Q6ZU65 1347 aa29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms