RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, humanhuman

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-209ENST00000598580 KLRG1Q96E93 195 aa14.74□□□□□ -0.05
GRAMD1A-209ENST00000598580 KLRG2A4D1S0 409 aaPredicted RBP14.73□□□□□ -0.05
GRAMD1A-209ENST00000598580 STYK1Q6J9G0 422 aa14.73□□□□□ -0.05
GRAMD1A-209ENST00000598580 PRPF40BQ6NWY9 871 aaKnown RBP14.73□□□□□ -0.05
GRAMD1A-209ENST00000598580 SMC1BQ8NDV3 1235 aa14.73□□□□□ -0.05
GRAMD1A-209ENST00000598580 PLEKHF1Q96S99 279 aa14.73□□□□□ -0.05
GRAMD1A-209ENST00000598580 THUMPD2Q9BTF0 503 aaKnown RBP14.73□□□□□ -0.05
GRAMD1A-209ENST00000598580 SLX4Q8IY92 1834 aa14.73□□□□□ -0.05
GRAMD1A-209ENST00000598580 HTATSF1O43719 755 aaKnown RBP14.72□□□□□ -0.05
GRAMD1A-209ENST00000598580 POTEIP0CG38 1075 aa14.72□□□□□ -0.05
GRAMD1A-209ENST00000598580 POTEJP0CG39 1038 aa14.72□□□□□ -0.05
GRAMD1A-209ENST00000598580 TAF7Q15545 349 aaPredicted RBP14.72□□□□□ -0.05
GRAMD1A-209ENST00000598580 CLEC4GQ6UXB4 293 aa14.72□□□□□ -0.05
GRAMD1A-209ENST00000598580 RTF1Q92541 710 aaKnown RBP14.72□□□□□ -0.05
GRAMD1A-209ENST00000598580 PCNTO95613 3336 aa14.72□□□□□ -0.05
GRAMD1A-209ENST00000598580 ERFEQ4G0M1 354 aa14.71□□□□□ -0.05
GRAMD1A-209ENST00000598580 NBPF5PQ86XG9 351 aaPredicted RBP14.71□□□□□ -0.05
GRAMD1A-209ENST00000598580 CNKSR1Q969H4 720 aa14.71□□□□□ -0.05
GRAMD1A-209ENST00000598580 MASTLQ96GX5 879 aa14.71□□□□□ -0.05
GRAMD1A-209ENST00000598580 PDZRN3Q9UPQ7 1066 aa14.71□□□□□ -0.05
GRAMD1A-209ENST00000598580 WDR90Q96KV7 1748 aa14.71□□□□□ -0.05
GRAMD1A-209ENST00000598580 LTBP3Q9NS15 1303 aa14.7□□□□□ -0.06
GRAMD1A-209ENST00000598580 FAM177BA6PVY3 158 aa14.7□□□□□ -0.06
GRAMD1A-209ENST00000598580 DDNO94850 711 aaPredicted RBP14.7□□□□□ -0.06
GRAMD1A-209ENST00000598580 SLC51AQ86UW1 340 aa14.7□□□□□ -0.06
GRAMD1A-209ENST00000598580 TAOK3Q9H2K8 898 aa14.7□□□□□ -0.06
GRAMD1A-209ENST00000598580 TNRC6CQ9HCJ0 1690 aaKnown RBP14.69□□□□□ -0.06
GRAMD1A-209ENST00000598580 ST5P78524 1137 aa14.69□□□□□ -0.06
GRAMD1A-209ENST00000598580 COL13A1Q5TAT6 717 aaPredicted RBP14.69□□□□□ -0.06
GRAMD1A-209ENST00000598580 NIP7Q9Y221 180 aaKnown RBP eCLIP14.69□□□□□ -0.06
GRAMD1A-209ENST00000598580 FER1L6Q2WGJ9 1857 aa14.69□□□□□ -0.06
GRAMD1A-209ENST00000598580 CCDC88AQ3V6T2 1871 aa14.69□□□□□ -0.06
GRAMD1A-209ENST00000598580 BCORQ6W2J9 1755 aa14.68□□□□□ -0.06
GRAMD1A-209ENST00000598580 EIF4A1P60842 406 aaKnown RBP14.68□□□□□ -0.06
GRAMD1A-209ENST00000598580 TTLL7Q6ZT98 887 aa14.68□□□□□ -0.06
GRAMD1A-209ENST00000598580 NGEFQ8N5V2 710 aa14.68□□□□□ -0.06
GRAMD1A-209ENST00000598580 NPR1P16066 1061 aa14.67□□□□□ -0.06
GRAMD1A-209ENST00000598580 NPM2Q86SE8 214 aaKnown RBP14.67□□□□□ -0.06
GRAMD1A-209ENST00000598580 TIAM2Q8IVF5 1701 aa14.66□□□□□ -0.06
GRAMD1A-209ENST00000598580 RGL2O15211 777 aa14.66□□□□□ -0.06
GRAMD1A-209ENST00000598580 NPHP1O15259 732 aa14.66□□□□□ -0.06
GRAMD1A-209ENST00000598580 NFE2L2Q16236 605 aa14.66□□□□□ -0.06
GRAMD1A-209ENST00000598580 DPY19L2Q6NUT2 758 aa14.66□□□□□ -0.06
GRAMD1A-209ENST00000598580 TPTE2Q6XPS3 522 aa14.66□□□□□ -0.06
GRAMD1A-209ENST00000598580 ZNF277Q9NRM2 450 aaPredicted RBP14.66□□□□□ -0.06
GRAMD1A-209ENST00000598580 ABCC12Q96J65 1359 aa14.65□□□□□ -0.06
GRAMD1A-209ENST00000598580 NUTM1Q86Y26 1132 aa14.65□□□□□ -0.06
GRAMD1A-209ENST00000598580 ZNF652Q9Y2D9 606 aa14.65□□□□□ -0.06
GRAMD1A-209ENST00000598580 RRP7AQ9Y3A4 280 aaKnown RBP14.65□□□□□ -0.06
GRAMD1A-209ENST00000598580 ZNF541Q9H0D2 1346 aa14.65□□□□□ -0.06
GRAMD1A-209ENST00000598580 CRY2Q49AN0 593 aa14.64□□□□□ -0.07
GRAMD1A-209ENST00000598580 C3orf67Q6ZVT6 689 aa14.64□□□□□ -0.07
GRAMD1A-209ENST00000598580 LRP10Q7Z4F1 713 aa14.64□□□□□ -0.07
GRAMD1A-209ENST00000598580 SNED1Q8TER0 1413 aa14.64□□□□□ -0.07
GRAMD1A-209ENST00000598580 UBN2Q6ZU65 1347 aa14.64□□□□□ -0.07
GRAMD1A-209ENST00000598580 ERVV-1B6SEH8 477 aa14.63□□□□□ -0.07
GRAMD1A-209ENST00000598580 FKBP4Q02790 459 aaKnown RBP eCLIP14.63□□□□□ -0.07
GRAMD1A-209ENST00000598580 PDIA6Q15084 440 aa14.63□□□□□ -0.07
GRAMD1A-209ENST00000598580 CCDC93Q567U6 631 aa14.63□□□□□ -0.07
GRAMD1A-209ENST00000598580 SUSD4Q5VX71 490 aa14.63□□□□□ -0.07
GRAMD1A-209ENST00000598580 CHADLQ6NUI6 762 aa14.63□□□□□ -0.07
GRAMD1A-209ENST00000598580 MAP3K15Q6ZN16 1313 aa14.63□□□□□ -0.07
GRAMD1A-209ENST00000598580 DICER1Q9UPY3 1922 aaKnown RBP14.62□□□□□ -0.07
GRAMD1A-209ENST00000598580 MYL6BP14649 208 aa14.62□□□□□ -0.07
GRAMD1A-209ENST00000598580 GPTP24298 496 aa14.62□□□□□ -0.07
GRAMD1A-209ENST00000598580 PROSER3Q2NL68 480 aa14.62□□□□□ -0.07
GRAMD1A-209ENST00000598580 SOGA3Q5TF21 947 aa14.62□□□□□ -0.07
GRAMD1A-209ENST00000598580 ZNF34Q8IZ26 560 aa14.62□□□□□ -0.07
GRAMD1A-209ENST00000598580 SYNE4Q8N205 404 aa14.62□□□□□ -0.07
GRAMD1A-209ENST00000598580 L3MBTL3Q96JM7 780 aaPredicted RBP14.62□□□□□ -0.07
GRAMD1A-209ENST00000598580 ZBTB3Q9H5J0 574 aa14.62□□□□□ -0.07
GRAMD1A-209ENST00000598580 TAF1DQ9H5J8 278 aaPredicted RBP14.62□□□□□ -0.07
GRAMD1A-209ENST00000598580 PNISRQ8TF01 805 aaKnown RBP14.61□□□□□ -0.07
GRAMD1A-209ENST00000598580 COL4A5P29400 1685 aa14.61□□□□□ -0.07
GRAMD1A-209ENST00000598580 FZD9O00144 591 aa14.6□□□□□ -0.07
GRAMD1A-209ENST00000598580 ITGBL1O95965 494 aaPredicted RBP14.6□□□□□ -0.07
GRAMD1A-209ENST00000598580 ANXA1P04083 346 aa14.6□□□□□ -0.07
GRAMD1A-209ENST00000598580 PASKQ96RG2 1323 aa14.6□□□□□ -0.07
GRAMD1A-209ENST00000598580 KDM3BQ7LBC6 1761 aa14.6□□□□□ -0.07
GRAMD1A-209ENST00000598580 ARFGEF2Q9Y6D5 1785 aa14.6□□□□□ -0.07
GRAMD1A-209ENST00000598580 CACNA1SQ13698 1873 aa14.59□□□□□ -0.07
GRAMD1A-209ENST00000598580 DLG5Q8TDM6 1919 aa14.59□□□□□ -0.07
GRAMD1A-209ENST00000598580 NTSR2O95665 410 aa14.59□□□□□ -0.07
GRAMD1A-209ENST00000598580 HOXA10P31260 410 aaPredicted RBP14.59□□□□□ -0.07
GRAMD1A-209ENST00000598580 HSPA1AP0DMV8 641 aaKnown RBP14.58□□□□□ -0.08
GRAMD1A-209ENST00000598580 HSPA1BP0DMV9 641 aaKnown RBP14.58□□□□□ -0.08
GRAMD1A-209ENST00000598580 GTF2E1P29083 439 aaPredicted RBP14.58□□□□□ -0.08
GRAMD1A-209ENST00000598580 ALDH1B1P30837 517 aa14.58□□□□□ -0.08
GRAMD1A-209ENST00000598580 IARSP41252 1262 aaKnown RBP14.58□□□□□ -0.08
GRAMD1A-209ENST00000598580 RTKN2Q8IZC4 609 aa14.58□□□□□ -0.08
GRAMD1A-209ENST00000598580 MKRN1Q9UHC7 482 aaKnown RBP14.58□□□□□ -0.08
GRAMD1A-209ENST00000598580 RIPK4P57078 832 aa14.57□□□□□ -0.08
GRAMD1A-209ENST00000598580 KRT24Q2M2I5 525 aa14.57□□□□□ -0.08
GRAMD1A-209ENST00000598580 GIGYF2Q6Y7W6 1299 aaKnown RBP14.57□□□□□ -0.08
GRAMD1A-209ENST00000598580 CREBZFQ9NS37 354 aa14.57□□□□□ -0.08
GRAMD1A-209ENST00000598580 TCERG1O14776 1098 aaKnown RBP14.56□□□□□ -0.08
GRAMD1A-209ENST00000598580 EIF2S2P20042 333 aaKnown RBP14.56□□□□□ -0.08
GRAMD1A-209ENST00000598580 TMPOP42166 694 aaKnown RBP14.56□□□□□ -0.08
GRAMD1A-209ENST00000598580 KIF6Q6ZMV9 814 aa14.56□□□□□ -0.08
GRAMD1A-209ENST00000598580 LDHDQ86WU2 507 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms