RNA–Protein interactions for RNA: ENST00000598178.1

LTBP4-221, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-221ENST00000598178 MKRN1Q9UHC7 482 aaKnown RBP16.55■□□□□ 0.24
LTBP4-221ENST00000598178 PASKQ96RG2 1323 aa16.54■□□□□ 0.24
LTBP4-221ENST00000598178 PDE6BP35913 854 aa16.54■□□□□ 0.24
LTBP4-221ENST00000598178 RALBP1Q15311 655 aa16.54■□□□□ 0.24
LTBP4-221ENST00000598178 ZNF330Q9Y3S2 320 aaPredicted RBP16.54■□□□□ 0.24
LTBP4-221ENST00000598178 ARFGEF2Q9Y6D5 1785 aa16.54■□□□□ 0.24
LTBP4-221ENST00000598178 COL11A2P13942 1736 aaPredicted RBP16.53■□□□□ 0.24
LTBP4-221ENST00000598178 IL6STP40189 918 aaPredicted RBP16.53■□□□□ 0.24
LTBP4-221ENST00000598178 CTCFP49711 727 aaPredicted RBP16.53■□□□□ 0.24
LTBP4-221ENST00000598178 MCM10Q7L590 875 aa16.53■□□□□ 0.24
LTBP4-221ENST00000598178 IQCA1LA6NCM1 817 aa16.52■□□□□ 0.24
LTBP4-221ENST00000598178 EIF5P55010 431 aaKnown RBP16.52■□□□□ 0.24
LTBP4-221ENST00000598178 L3MBTL3Q96JM7 780 aaPredicted RBP16.52■□□□□ 0.24
LTBP4-221ENST00000598178 TAOK3Q9H2K8 898 aa16.52■□□□□ 0.24
LTBP4-221ENST00000598178 C21orf2O43822 256 aa16.51■□□□□ 0.23
LTBP4-221ENST00000598178 POTEIP0CG38 1075 aa16.51■□□□□ 0.23
LTBP4-221ENST00000598178 POTEJP0CG39 1038 aa16.51■□□□□ 0.23
LTBP4-221ENST00000598178 LDHDQ86WU2 507 aa16.51■□□□□ 0.23
LTBP4-221ENST00000598178 PNISRQ8TF01 805 aaKnown RBP16.51■□□□□ 0.23
LTBP4-221ENST00000598178 LAMB4A4D0S4 1761 aa16.51■□□□□ 0.23
LTBP4-221ENST00000598178 DLG5Q8TDM6 1919 aa16.51■□□□□ 0.23
LTBP4-221ENST00000598178 SLX4Q8IY92 1834 aa16.5■□□□□ 0.23
LTBP4-221ENST00000598178 DDNO94850 711 aaPredicted RBP16.5■□□□□ 0.23
LTBP4-221ENST00000598178 SNRPA1P09661 255 aaKnown RBP16.5■□□□□ 0.23
LTBP4-221ENST00000598178 SOGA3Q5TF21 947 aa16.5■□□□□ 0.23
LTBP4-221ENST00000598178 ZNF622Q969S3 477 aaKnown RBP eCLIP16.5■□□□□ 0.23
LTBP4-221ENST00000598178 AIDAQ96BJ3 306 aa16.5■□□□□ 0.23
LTBP4-221ENST00000598178 WBP1LQ9NX94 342 aa16.5■□□□□ 0.23
LTBP4-221ENST00000598178 BCORQ6W2J9 1755 aa16.5■□□□□ 0.23
LTBP4-221ENST00000598178 NPHP1O15259 732 aa16.49■□□□□ 0.23
LTBP4-221ENST00000598178 TAF7Q15545 349 aaPredicted RBP16.49■□□□□ 0.23
LTBP4-221ENST00000598178 PRR5LQ6MZQ0 368 aa16.49■□□□□ 0.23
LTBP4-221ENST00000598178 CNKSR1Q969H4 720 aa16.49■□□□□ 0.23
LTBP4-221ENST00000598178 MYBBP1AQ9BQG0 1328 aaKnown RBP16.48■□□□□ 0.23
LTBP4-221ENST00000598178 TMEM88BA6NKF7 163 aa16.48■□□□□ 0.23
LTBP4-221ENST00000598178 ITGBL1O95965 494 aaPredicted RBP16.48■□□□□ 0.23
LTBP4-221ENST00000598178 VEGFBP49765 207 aa16.48■□□□□ 0.23
LTBP4-221ENST00000598178 DCTN1Q14203 1278 aa16.48■□□□□ 0.23
LTBP4-221ENST00000598178 NFE2L2Q16236 605 aa16.48■□□□□ 0.23
LTBP4-221ENST00000598178 TBC1D9BQ66K14 1250 aa16.48■□□□□ 0.23
LTBP4-221ENST00000598178 STYK1Q6J9G0 422 aa16.48■□□□□ 0.23
LTBP4-221ENST00000598178 TAF1DQ9H5J8 278 aaPredicted RBP16.48■□□□□ 0.23
LTBP4-221ENST00000598178 ZNF652Q9Y2D9 606 aa16.48■□□□□ 0.23
LTBP4-221ENST00000598178 ADAMTSL1Q8N6G6 1762 aa16.48■□□□□ 0.23
LTBP4-221ENST00000598178 CACNA1SQ13698 1873 aa16.48■□□□□ 0.23
LTBP4-221ENST00000598178 KDM3BQ7LBC6 1761 aa16.47■□□□□ 0.23
LTBP4-221ENST00000598178 KCNQ3O43525 872 aa16.47■□□□□ 0.23
LTBP4-221ENST00000598178 A1BGP04217 495 aa16.47■□□□□ 0.23
LTBP4-221ENST00000598178 DDX10Q13206 875 aaKnown RBP16.47■□□□□ 0.23
LTBP4-221ENST00000598178 BICDL1Q6ZP65 573 aa16.47■□□□□ 0.23
LTBP4-221ENST00000598178 DZIP3Q86Y13 1208 aaKnown RBP16.47■□□□□ 0.23
LTBP4-221ENST00000598178 TBC1D2BQ9UPU7 963 aa16.47■□□□□ 0.23
LTBP4-221ENST00000598178 SRGNP10124 158 aa16.46■□□□□ 0.23
LTBP4-221ENST00000598178 PLEKHF1Q96S99 279 aa16.46■□□□□ 0.23
LTBP4-221ENST00000598178 RASSF10A6NK89 507 aa16.45■□□□□ 0.22
LTBP4-221ENST00000598178 LMOD3Q0VAK6 560 aa16.45■□□□□ 0.22
LTBP4-221ENST00000598178 PRPF40BQ6NWY9 871 aaKnown RBP16.45■□□□□ 0.22
LTBP4-221ENST00000598178 SETDB2Q96T68 719 aa16.45■□□□□ 0.22
LTBP4-221ENST00000598178 ST5P78524 1137 aa16.44■□□□□ 0.22
LTBP4-221ENST00000598178 C7orf43Q8WVR3 580 aa16.44■□□□□ 0.22
LTBP4-221ENST00000598178 MASTLQ96GX5 879 aa16.44■□□□□ 0.22
LTBP4-221ENST00000598178 ZNF219Q9P2Y4 722 aaPredicted RBP16.44■□□□□ 0.22
LTBP4-221ENST00000598178 USP16Q9Y5T5 823 aa16.44■□□□□ 0.22
LTBP4-221ENST00000598178 CAMTA2O94983 1202 aa16.43■□□□□ 0.22
LTBP4-221ENST00000598178 LBX1P52954 281 aa16.43■□□□□ 0.22
LTBP4-221ENST00000598178 MAP2K1Q02750 393 aaPredicted RBP16.43■□□□□ 0.22
LTBP4-221ENST00000598178 WDR43Q15061 677 aaKnown RBP eCLIP16.43■□□□□ 0.22
LTBP4-221ENST00000598178 CLEC4GQ6UXB4 293 aa16.43■□□□□ 0.22
LTBP4-221ENST00000598178 CNBD1Q8NA66 436 aa16.43■□□□□ 0.22
LTBP4-221ENST00000598178 ABHD8Q96I13 439 aa16.43■□□□□ 0.22
LTBP4-221ENST00000598178 RGL2O15211 777 aa16.42■□□□□ 0.22
LTBP4-221ENST00000598178 PNMA8AQ86V59 439 aaPredicted RBP16.42■□□□□ 0.22
LTBP4-221ENST00000598178 PRAMEF22A3QJZ6 481 aa16.41■□□□□ 0.22
LTBP4-221ENST00000598178 KLRG2A4D1S0 409 aaPredicted RBP16.41■□□□□ 0.22
LTBP4-221ENST00000598178 HSPA8P11142 646 aaKnown RBP16.41■□□□□ 0.22
LTBP4-221ENST00000598178 DEFB115Q30KQ5 88 aa16.41■□□□□ 0.22
LTBP4-221ENST00000598178 PCDH10Q9P2E7 1040 aa16.41■□□□□ 0.22
LTBP4-221ENST00000598178 HACL1Q9UJ83 578 aa16.41■□□□□ 0.22
LTBP4-221ENST00000598178 THSD7BQ9C0I4 1608 aa16.41■□□□□ 0.22
LTBP4-221ENST00000598178 PIP4K2AP48426 406 aaPredicted RBP16.4■□□□□ 0.22
LTBP4-221ENST00000598178 RGS19P49795 217 aa16.4■□□□□ 0.22
LTBP4-221ENST00000598178 CCDC93Q567U6 631 aa16.4■□□□□ 0.22
LTBP4-221ENST00000598178 DIEXFQ68CQ4 756 aaKnown RBP16.4■□□□□ 0.22
LTBP4-221ENST00000598178 CCDC24Q8N4L8 307 aa16.4■□□□□ 0.22
LTBP4-221ENST00000598178 MIS18AQ9NYP9 233 aa16.4■□□□□ 0.22
LTBP4-221ENST00000598178 TNRC18O15417 2968 aaPredicted RBP16.4■□□□□ 0.22
LTBP4-221ENST00000598178 EPHX2P34913 555 aa16.39■□□□□ 0.21
LTBP4-221ENST00000598178 RIPK4P57078 832 aa16.39■□□□□ 0.21
LTBP4-221ENST00000598178 FKBP4Q02790 459 aaKnown RBP eCLIP16.39■□□□□ 0.21
LTBP4-221ENST00000598178 FAM161AQ3B820 660 aa16.39■□□□□ 0.21
LTBP4-221ENST00000598178 NBPF5PQ86XG9 351 aaPredicted RBP16.39■□□□□ 0.21
LTBP4-221ENST00000598178 TSPYL4Q9UJ04 414 aa16.39■□□□□ 0.21
LTBP4-221ENST00000598178 WDR33Q9C0J8 1336 aaKnown RBP16.39■□□□□ 0.21
LTBP4-221ENST00000598178 NPR1P16066 1061 aa16.38■□□□□ 0.21
LTBP4-221ENST00000598178 KIF6Q6ZMV9 814 aa16.38■□□□□ 0.21
LTBP4-221ENST00000598178 CNTROBQ8N137 903 aa16.38■□□□□ 0.21
LTBP4-221ENST00000598178 THUMPD2Q9BTF0 503 aaKnown RBP16.38■□□□□ 0.21
LTBP4-221ENST00000598178 BABAM1Q9NWV8 329 aa16.38■□□□□ 0.21
LTBP4-221ENST00000598178 FZD9O00144 591 aa16.37■□□□□ 0.21
LTBP4-221ENST00000598178 EIF4A1P60842 406 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms