RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 PDE6BP35913 854 aa16.13■□□□□ 0.17
SOX2-OT-228ENST00000597828 NBPF10Q6P3W6 841 aaKnown RBP16.13■□□□□ 0.17
SOX2-OT-228ENST00000597828 NBPF15Q8N660 670 aa16.13■□□□□ 0.17
SOX2-OT-228ENST00000597828 DNAJC5GQ8N7S2 189 aa16.13■□□□□ 0.17
SOX2-OT-228ENST00000597828 SETDB2Q96T68 719 aa16.13■□□□□ 0.17
SOX2-OT-228ENST00000597828 MIS18AQ9NYP9 233 aa16.13■□□□□ 0.17
SOX2-OT-228ENST00000597828 TAF1P21675 1872 aa16.13■□□□□ 0.17
SOX2-OT-228ENST00000597828 ZC3H4Q9UPT8 1303 aaKnown RBP16.13■□□□□ 0.17
SOX2-OT-228ENST00000597828 NPHP1O15259 732 aa16.12■□□□□ 0.17
SOX2-OT-228ENST00000597828 SNRPA1P09661 255 aaKnown RBP16.12■□□□□ 0.17
SOX2-OT-228ENST00000597828 NPM2Q86SE8 214 aaKnown RBP16.12■□□□□ 0.17
SOX2-OT-228ENST00000597828 GLTPD2A6NH11 291 aa16.11■□□□□ 0.17
SOX2-OT-228ENST00000597828 ST5P78524 1137 aa16.11■□□□□ 0.17
SOX2-OT-228ENST00000597828 FSTL1Q12841 308 aa16.1■□□□□ 0.17
SOX2-OT-228ENST00000597828 IFFO2Q5TF58 517 aa16.1■□□□□ 0.17
SOX2-OT-228ENST00000597828 THUMPD2Q9BTF0 503 aaKnown RBP16.1■□□□□ 0.17
SOX2-OT-228ENST00000597828 FAM177BA6PVY3 158 aa16.09■□□□□ 0.17
SOX2-OT-228ENST00000597828 SRGNP10124 158 aa16.09■□□□□ 0.17
SOX2-OT-228ENST00000597828 PRPF40BQ6NWY9 871 aaKnown RBP16.09■□□□□ 0.17
SOX2-OT-228ENST00000597828 PCNTO95613 3336 aa16.09■□□□□ 0.17
SOX2-OT-228ENST00000597828 POTECB2RU33 542 aa16.08■□□□□ 0.16
SOX2-OT-228ENST00000597828 HTATSF1O43719 755 aaKnown RBP16.08■□□□□ 0.16
SOX2-OT-228ENST00000597828 TAF7Q15545 349 aaPredicted RBP16.08■□□□□ 0.16
SOX2-OT-228ENST00000597828 HLFQ16534 295 aa16.08■□□□□ 0.16
SOX2-OT-228ENST00000597828 STYK1Q6J9G0 422 aa16.08■□□□□ 0.16
SOX2-OT-228ENST00000597828 NBPF5PQ86XG9 351 aaPredicted RBP16.08■□□□□ 0.16
SOX2-OT-228ENST00000597828 PLEKHF1Q96S99 279 aa16.08■□□□□ 0.16
SOX2-OT-228ENST00000597828 PDZRN3Q9UPQ7 1066 aa16.08■□□□□ 0.16
SOX2-OT-228ENST00000597828 SMC1BQ8NDV3 1235 aa16.07■□□□□ 0.16
SOX2-OT-228ENST00000597828 MASTLQ96GX5 879 aa16.07■□□□□ 0.16
SOX2-OT-228ENST00000597828 TAOK3Q9H2K8 898 aa16.07■□□□□ 0.16
SOX2-OT-228ENST00000597828 NIP7Q9Y221 180 aaKnown RBP eCLIP16.07■□□□□ 0.16
SOX2-OT-228ENST00000597828 ZNF652Q9Y2D9 606 aa16.07■□□□□ 0.16
SOX2-OT-228ENST00000597828 ABCC12Q96J65 1359 aa16.07■□□□□ 0.16
SOX2-OT-228ENST00000597828 ADAMTSL1Q8N6G6 1762 aa16.07■□□□□ 0.16
SOX2-OT-228ENST00000597828 LTBP3Q9NS15 1303 aa16.06■□□□□ 0.16
SOX2-OT-228ENST00000597828 VEGFAP15692 232 aaPredicted RBP16.06■□□□□ 0.16
SOX2-OT-228ENST00000597828 ERFEQ4G0M1 354 aa16.06■□□□□ 0.16
SOX2-OT-228ENST00000597828 OLFM4Q6UX06 510 aa16.06■□□□□ 0.16
SOX2-OT-228ENST00000597828 CLEC4GQ6UXB4 293 aa16.06■□□□□ 0.16
SOX2-OT-228ENST00000597828 NGEFQ8N5V2 710 aa16.06■□□□□ 0.16
SOX2-OT-228ENST00000597828 CNKSR1Q969H4 720 aa16.06■□□□□ 0.16
SOX2-OT-228ENST00000597828 KLRG1Q96E93 195 aa16.06■□□□□ 0.16
SOX2-OT-228ENST00000597828 DDX60Q8IY21 1712 aaKnown RBP16.05■□□□□ 0.16
SOX2-OT-228ENST00000597828 NFE2L2Q16236 605 aa16.04■□□□□ 0.16
SOX2-OT-228ENST00000597828 LTBP1Q14766 1721 aa16.04■□□□□ 0.16
SOX2-OT-228ENST00000597828 COL4A5P29400 1685 aa16.04■□□□□ 0.16
SOX2-OT-228ENST00000597828 TRPM7Q96QT4 1865 aa16.03■□□□□ 0.16
SOX2-OT-228ENST00000597828 NEFMP07197 916 aa16.03■□□□□ 0.16
SOX2-OT-228ENST00000597828 EIF4A1P60842 406 aaKnown RBP16.03■□□□□ 0.16
SOX2-OT-228ENST00000597828 TTLL7Q6ZT98 887 aa16.03■□□□□ 0.16
SOX2-OT-228ENST00000597828 C7orf43Q8WVR3 580 aa16.03■□□□□ 0.16
SOX2-OT-228ENST00000597828 SNED1Q8TER0 1413 aa16.02■□□□□ 0.16
SOX2-OT-228ENST00000597828 DDNO94850 711 aaPredicted RBP16.02■□□□□ 0.16
SOX2-OT-228ENST00000597828 POTEIP0CG38 1075 aa16.02■□□□□ 0.16
SOX2-OT-228ENST00000597828 POTEJP0CG39 1038 aa16.02■□□□□ 0.16
SOX2-OT-228ENST00000597828 MYL6BP14649 208 aa16.02■□□□□ 0.16
SOX2-OT-228ENST00000597828 NPR1P16066 1061 aa16.02■□□□□ 0.16
SOX2-OT-228ENST00000597828 NUTM1Q86Y26 1132 aa16.02■□□□□ 0.16
SOX2-OT-228ENST00000597828 RRP7AQ9Y3A4 280 aaKnown RBP16.02■□□□□ 0.16
SOX2-OT-228ENST00000597828 UBN2Q6ZU65 1347 aa16.01■□□□□ 0.15
SOX2-OT-228ENST00000597828 MAPK8IP3Q9UPT6 1336 aa16.01■□□□□ 0.15
SOX2-OT-228ENST00000597828 KLRG2A4D1S0 409 aaPredicted RBP16.01■□□□□ 0.15
SOX2-OT-228ENST00000597828 CCDC93Q567U6 631 aa16.01■□□□□ 0.15
SOX2-OT-228ENST00000597828 DPY19L2Q6NUT2 758 aa16.01■□□□□ 0.15
SOX2-OT-228ENST00000597828 TPTE2Q6XPS3 522 aa16.01■□□□□ 0.15
SOX2-OT-228ENST00000597828 SLC51AQ86UW1 340 aa16.01■□□□□ 0.15
SOX2-OT-228ENST00000597828 MAP3K15Q6ZN16 1313 aa16■□□□□ 0.15
SOX2-OT-228ENST00000597828 GPTP24298 496 aa16■□□□□ 0.15
SOX2-OT-228ENST00000597828 JMYQ8N9B5 988 aa16■□□□□ 0.15
SOX2-OT-228ENST00000597828 ZBTB3Q9H5J0 574 aa16■□□□□ 0.15
SOX2-OT-228ENST00000597828 ZNF277Q9NRM2 450 aaPredicted RBP16■□□□□ 0.15
SOX2-OT-228ENST00000597828 ZNF541Q9H0D2 1346 aa15.99■□□□□ 0.15
SOX2-OT-228ENST00000597828 RGL2O15211 777 aa15.99■□□□□ 0.15
SOX2-OT-228ENST00000597828 SOGA3Q5TF21 947 aa15.99■□□□□ 0.15
SOX2-OT-228ENST00000597828 PNISRQ8TF01 805 aaKnown RBP15.99■□□□□ 0.15
SOX2-OT-228ENST00000597828 GTF2E1P29083 439 aaPredicted RBP15.98■□□□□ 0.15
SOX2-OT-228ENST00000597828 FKBP4Q02790 459 aaKnown RBP eCLIP15.98■□□□□ 0.15
SOX2-OT-228ENST00000597828 RIC1Q4ADV7 1423 aa15.98■□□□□ 0.15
SOX2-OT-228ENST00000597828 LRRC37AA6NMS7 1700 aa15.97■□□□□ 0.15
SOX2-OT-228ENST00000597828 ANXA1P04083 346 aa15.97■□□□□ 0.15
SOX2-OT-228ENST00000597828 KIF6Q6ZMV9 814 aa15.97■□□□□ 0.15
SOX2-OT-228ENST00000597828 TSPYL4Q9UJ04 414 aa15.97■□□□□ 0.15
SOX2-OT-228ENST00000597828 IBTKQ9P2D0 1353 aaPredicted RBP15.97■□□□□ 0.15
SOX2-OT-228ENST00000597828 ERVV-1B6SEH8 477 aa15.96■□□□□ 0.15
SOX2-OT-228ENST00000597828 SUSD4Q5VX71 490 aa15.96■□□□□ 0.15
SOX2-OT-228ENST00000597828 SPEF2Q9C093 1822 aa15.96■□□□□ 0.14
SOX2-OT-228ENST00000597828 RIPK4P57078 832 aa15.95■□□□□ 0.14
SOX2-OT-228ENST00000597828 PROSER3Q2NL68 480 aa15.95■□□□□ 0.14
SOX2-OT-228ENST00000597828 CRY2Q49AN0 593 aa15.95■□□□□ 0.14
SOX2-OT-228ENST00000597828 C3orf67Q6ZVT6 689 aa15.95■□□□□ 0.14
SOX2-OT-228ENST00000597828 LRP10Q7Z4F1 713 aa15.95■□□□□ 0.14
SOX2-OT-228ENST00000597828 CCDC146Q8IYE0 955 aa15.95■□□□□ 0.14
SOX2-OT-228ENST00000597828 NYXQ9GZU5 481 aa15.95■□□□□ 0.14
SOX2-OT-228ENST00000597828 POLR2AP24928 1970 aaKnown RBP15.95■□□□□ 0.14
SOX2-OT-228ENST00000597828 NTSR2O95665 410 aa15.94■□□□□ 0.14
SOX2-OT-228ENST00000597828 EIF2S2P20042 333 aaKnown RBP15.94■□□□□ 0.14
SOX2-OT-228ENST00000597828 IARSP41252 1262 aaKnown RBP15.94■□□□□ 0.14
SOX2-OT-228ENST00000597828 PDIA6Q15084 440 aa15.94■□□□□ 0.14
SOX2-OT-228ENST00000597828 CHADLQ6NUI6 762 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms