RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 KDM4FA0A1W2PPD8 638 aa18.5■□□□□ 0.55
IRF3-219ENST00000597636 RAB11FIP3O75154 756 aa18.5■□□□□ 0.55
IRF3-219ENST00000597636 CPA1P15085 419 aa18.5■□□□□ 0.55
IRF3-219ENST00000597636 CASTP20810 708 aaKnown RBP18.5■□□□□ 0.55
IRF3-219ENST00000597636 USP44Q9H0E7 712 aa18.5■□□□□ 0.55
IRF3-219ENST00000597636 MON2Q7Z3U7 1717 aa18.49■□□□□ 0.55
IRF3-219ENST00000597636 MAP3K11Q16584 847 aa18.49■□□□□ 0.55
IRF3-219ENST00000597636 CCDC30Q5VVM6 783 aa18.49■□□□□ 0.55
IRF3-219ENST00000597636 MRVI1Q9Y6F6 885 aa18.49■□□□□ 0.55
IRF3-219ENST00000597636 ACEP12821 1306 aa18.49■□□□□ 0.55
IRF3-219ENST00000597636 SMTNL1A8MU46 457 aa18.49■□□□□ 0.55
IRF3-219ENST00000597636 MTHFSDQ2M296 383 aaKnown RBP18.49■□□□□ 0.55
IRF3-219ENST00000597636 CCDC186Q7Z3E2 898 aa18.49■□□□□ 0.55
IRF3-219ENST00000597636 TYRO3Q06418 890 aa18.48■□□□□ 0.55
IRF3-219ENST00000597636 CNTROBQ8N137 903 aa18.48■□□□□ 0.55
IRF3-219ENST00000597636 NGDNQ8NEJ9 315 aaKnown RBP18.48■□□□□ 0.55
IRF3-219ENST00000597636 ZSCAN31Q96LW9 406 aaPredicted RBP18.48■□□□□ 0.55
IRF3-219ENST00000597636 VPS37CA5D8V6 355 aaPredicted RBP18.48■□□□□ 0.55
IRF3-219ENST00000597636 UBTFL1P0CB47 393 aaPredicted RBP18.48■□□□□ 0.55
IRF3-219ENST00000597636 VPS53Q5VIR6 699 aa18.48■□□□□ 0.55
IRF3-219ENST00000597636 LUZP1Q86V48 1076 aa18.48■□□□□ 0.55
IRF3-219ENST00000597636 NUP62CLQ9H1M0 184 aa18.48■□□□□ 0.55
IRF3-219ENST00000597636 SH2B1Q9NRF2 756 aaPredicted RBP18.48■□□□□ 0.55
IRF3-219ENST00000597636 CTNNA3Q9UI47 895 aa18.48■□□□□ 0.55
IRF3-219ENST00000597636 SURF6O75683 361 aaKnown RBP18.48■□□□□ 0.55
IRF3-219ENST00000597636 SPG7Q9UQ90 795 aa18.48■□□□□ 0.55
IRF3-219ENST00000597636 IGSF3O75054 1194 aa18.47■□□□□ 0.55
IRF3-219ENST00000597636 CWC27Q6UX04 472 aaKnown RBP18.47■□□□□ 0.55
IRF3-219ENST00000597636 RHPN1Q8TCX5 695 aa18.47■□□□□ 0.55
IRF3-219ENST00000597636 PDRG1Q9NUG6 133 aa18.47■□□□□ 0.55
IRF3-219ENST00000597636 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.47■□□□□ 0.55
IRF3-219ENST00000597636 DTNBO60941 627 aa18.47■□□□□ 0.55
IRF3-219ENST00000597636 LRMPQ12912 555 aa18.47■□□□□ 0.55
IRF3-219ENST00000597636 TTC6Q86TZ1 520 aa18.47■□□□□ 0.55
IRF3-219ENST00000597636 C16orf45Q96MC5 204 aaPredicted RBP18.47■□□□□ 0.55
IRF3-219ENST00000597636 LIG1P18858 919 aa18.46■□□□□ 0.55
IRF3-219ENST00000597636 TNNT1P13805 278 aa18.45■□□□□ 0.54
IRF3-219ENST00000597636 KRT85P78386 507 aa18.45■□□□□ 0.54
IRF3-219ENST00000597636 CAMK4Q16566 473 aa18.45■□□□□ 0.54
IRF3-219ENST00000597636 PPP1R42Q7Z4L9 355 aa18.45■□□□□ 0.54
IRF3-219ENST00000597636 CBX8Q9HC52 389 aa18.45■□□□□ 0.54
IRF3-219ENST00000597636 MAP3K19Q56UN5 1328 aa18.45■□□□□ 0.54
IRF3-219ENST00000597636 TTC21BQ7Z4L5 1316 aa18.45■□□□□ 0.54
IRF3-219ENST00000597636 POLA2Q14181 598 aa18.45■□□□□ 0.54
IRF3-219ENST00000597636 DRC7Q8IY82 874 aa18.45■□□□□ 0.54
IRF3-219ENST00000597636 NECTIN2Q92692 538 aa18.45■□□□□ 0.54
IRF3-219ENST00000597636 JAKMIP1Q96N16 626 aaKnown RBP18.45■□□□□ 0.54
IRF3-219ENST00000597636 TM6SF1Q9BZW5 370 aa18.45■□□□□ 0.54
IRF3-219ENST00000597636 ZSWIM6Q9HCJ5 1215 aa18.45■□□□□ 0.54
IRF3-219ENST00000597636 PAXBP1Q9Y5B6 917 aa18.45■□□□□ 0.54
IRF3-219ENST00000597636 ELP1O95163 1332 aa18.45■□□□□ 0.54
IRF3-219ENST00000597636 ST3GAL1Q11201 340 aa18.44■□□□□ 0.54
IRF3-219ENST00000597636 ZSCAN25Q6NSZ9 544 aa18.44■□□□□ 0.54
IRF3-219ENST00000597636 KIF1BPQ96EK5 621 aa18.44■□□□□ 0.54
IRF3-219ENST00000597636 CGNQ9P2M7 1197 aaKnown RBP18.44■□□□□ 0.54
IRF3-219ENST00000597636 NRBP1Q9UHY1 535 aa18.44■□□□□ 0.54
IRF3-219ENST00000597636 CHMP3Q9Y3E7 222 aa18.44■□□□□ 0.54
IRF3-219ENST00000597636 ADCK5Q3MIX3 580 aa18.44■□□□□ 0.54
IRF3-219ENST00000597636 PLA2G4DQ86XP0 818 aa18.44■□□□□ 0.54
IRF3-219ENST00000597636 CYP46A1Q9Y6A2 500 aa18.44■□□□□ 0.54
IRF3-219ENST00000597636 TECPR2O15040 1411 aa18.44■□□□□ 0.54
IRF3-219ENST00000597636 XRN1Q8IZH2 1706 aaKnown RBP18.44■□□□□ 0.54
IRF3-219ENST00000597636 ZNF75DP51815 510 aa18.44■□□□□ 0.54
IRF3-219ENST00000597636 GABPB1Q06547 395 aaPredicted RBP18.44■□□□□ 0.54
IRF3-219ENST00000597636 ANO6Q4KMQ2 910 aa18.44■□□□□ 0.54
IRF3-219ENST00000597636 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.44■□□□□ 0.54
IRF3-219ENST00000597636 SIRT1Q96EB6 747 aa18.44■□□□□ 0.54
IRF3-219ENST00000597636 DDX41Q9UJV9 622 aaKnown RBP18.44■□□□□ 0.54
IRF3-219ENST00000597636 RGPD1P0DJD0 1748 aa18.43■□□□□ 0.54
IRF3-219ENST00000597636 PDIA4P13667 645 aaKnown RBP18.43■□□□□ 0.54
IRF3-219ENST00000597636 ME3Q16798 604 aa18.43■□□□□ 0.54
IRF3-219ENST00000597636 TAF3Q5VWG9 929 aa18.43■□□□□ 0.54
IRF3-219ENST00000597636 LARP1BQ659C4 914 aaKnown RBP18.43■□□□□ 0.54
IRF3-219ENST00000597636 TRIM5Q9C035 493 aa18.43■□□□□ 0.54
IRF3-219ENST00000597636 TNMDQ9H2S6 317 aa18.43■□□□□ 0.54
IRF3-219ENST00000597636 ZNF771Q7L3S4 317 aaPredicted RBP18.43■□□□□ 0.54
IRF3-219ENST00000597636 CKAP2LQ8IYA6 745 aa18.43■□□□□ 0.54
IRF3-219ENST00000597636 CCDC112Q8NEF3 446 aa18.43■□□□□ 0.54
IRF3-219ENST00000597636 PTH1RQ03431 593 aa18.42■□□□□ 0.54
IRF3-219ENST00000597636 PROSER2Q86WR7 435 aaPredicted RBP18.42■□□□□ 0.54
IRF3-219ENST00000597636 KCNB2Q92953 911 aa18.42■□□□□ 0.54
IRF3-219ENST00000597636 DACT1Q9NYF0 836 aa18.42■□□□□ 0.54
IRF3-219ENST00000597636 AKAP12Q02952 1782 aa18.42■□□□□ 0.54
IRF3-219ENST00000597636 CCDC171Q6TFL3 1326 aa18.42■□□□□ 0.54
IRF3-219ENST00000597636 PRPF40BQ6NWY9 871 aaKnown RBP18.42■□□□□ 0.54
IRF3-219ENST00000597636 NECAB1Q8N987 351 aa18.42■□□□□ 0.54
IRF3-219ENST00000597636 RUFY2Q8WXA3 655 aa18.42■□□□□ 0.54
IRF3-219ENST00000597636 OVOS2A0A0J9YW53 1432 aa18.42■□□□□ 0.54
IRF3-219ENST00000597636 OVOS2Q6IE36 1432 aa18.42■□□□□ 0.54
IRF3-219ENST00000597636 TDRD7Q8NHU6 1098 aaKnown RBP18.41■□□□□ 0.54
IRF3-219ENST00000597636 PXDNLA1KZ92 1463 aa18.41■□□□□ 0.54
IRF3-219ENST00000597636 MAP3K5Q99683 1374 aa18.41■□□□□ 0.54
IRF3-219ENST00000597636 NAA30Q147X3 362 aaPredicted RBP18.41■□□□□ 0.54
IRF3-219ENST00000597636 MORC2Q9Y6X9 1032 aaPredicted RBP18.41■□□□□ 0.54
IRF3-219ENST00000597636 ESCO1Q5FWF5 840 aa18.4■□□□□ 0.54
IRF3-219ENST00000597636 FAM173BQ6P4H8 233 aa18.4■□□□□ 0.54
IRF3-219ENST00000597636 RBM43Q6ZSC3 357 aaKnown RBP18.4■□□□□ 0.54
IRF3-219ENST00000597636 FERMT3Q86UX7 667 aa18.4■□□□□ 0.54
IRF3-219ENST00000597636 DDX19AQ9NUU7 478 aaKnown RBP18.4■□□□□ 0.54
IRF3-219ENST00000597636 TTC21AQ8NDW8 1320 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms