RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 MCOLN1Q9GZU1 580 aa15.73■□□□□ 0.11
SHKBP1-213ENST00000597325 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.73■□□□□ 0.11
SHKBP1-213ENST00000597325 SCN4AP35499 1836 aa15.73■□□□□ 0.11
SHKBP1-213ENST00000597325 CCDC27Q2M243 656 aa15.72■□□□□ 0.11
SHKBP1-213ENST00000597325 RTF1Q92541 710 aaKnown RBP15.72■□□□□ 0.11
SHKBP1-213ENST00000597325 CFAP44Q96MT7 982 aa15.72■□□□□ 0.11
SHKBP1-213ENST00000597325 LTBP1Q14766 1721 aa15.71■□□□□ 0.11
SHKBP1-213ENST00000597325 PRPF38BQ5VTL8 546 aaKnown RBP15.71■□□□□ 0.11
SHKBP1-213ENST00000597325 TAF1DQ9H5J8 278 aaPredicted RBP15.71■□□□□ 0.11
SHKBP1-213ENST00000597325 GNAT3A8MTJ3 354 aa15.7■□□□□ 0.1
SHKBP1-213ENST00000597325 CALD1Q05682 793 aaKnown RBP15.7■□□□□ 0.1
SHKBP1-213ENST00000597325 AKAP4Q5JQC9 854 aa15.7■□□□□ 0.1
SHKBP1-213ENST00000597325 WWC1Q8IX03 1113 aa15.7■□□□□ 0.1
SHKBP1-213ENST00000597325 L3MBTL3Q96JM7 780 aaPredicted RBP15.7■□□□□ 0.1
SHKBP1-213ENST00000597325 RBM42Q9BTD8 480 aaKnown RBP15.7■□□□□ 0.1
SHKBP1-213ENST00000597325 IQCA1LA6NCM1 817 aa15.69■□□□□ 0.1
SHKBP1-213ENST00000597325 HTATSF1O43719 755 aaKnown RBP15.69■□□□□ 0.1
SHKBP1-213ENST00000597325 PHKG2P15735 406 aa15.69■□□□□ 0.1
SHKBP1-213ENST00000597325 MKI67P46013 3256 aaKnown RBP15.69■□□□□ 0.1
SHKBP1-213ENST00000597325 HSP90AB1P08238 724 aaKnown RBP15.68■□□□□ 0.1
SHKBP1-213ENST00000597325 IFNL2Q8IZJ0 200 aa15.68■□□□□ 0.1
SHKBP1-213ENST00000597325 TRIM35Q9UPQ4 493 aa15.68■□□□□ 0.1
SHKBP1-213ENST00000597325 ZNF521Q96K83 1311 aa15.68■□□□□ 0.1
SHKBP1-213ENST00000597325 LTBP3Q9NS15 1303 aa15.68■□□□□ 0.1
SHKBP1-213ENST00000597325 CRKLP46109 303 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-213ENST00000597325 GOLGA2Q08379 1002 aa15.67■□□□□ 0.1
SHKBP1-213ENST00000597325 CASP8AP2Q9UKL3 1982 aa15.67■□□□□ 0.1
SHKBP1-213ENST00000597325 WDR63Q8IWG1 891 aa15.66■□□□□ 0.1
SHKBP1-213ENST00000597325 BEGAINQ9BUH8 593 aa15.66■□□□□ 0.1
SHKBP1-213ENST00000597325 TSKSQ9UJT2 592 aa15.66■□□□□ 0.1
SHKBP1-213ENST00000597325 CENPBP07199 599 aaPredicted RBP15.65■□□□□ 0.1
SHKBP1-213ENST00000597325 MCM10Q7L590 875 aa15.65■□□□□ 0.1
SHKBP1-213ENST00000597325 C2CD5Q86YS7 1000 aa15.65■□□□□ 0.1
SHKBP1-213ENST00000597325 IL16Q14005 1332 aa15.65■□□□□ 0.1
SHKBP1-213ENST00000597325 CARMIL3Q8ND23 1372 aa15.64■□□□□ 0.09
SHKBP1-213ENST00000597325 DCTN1Q14203 1278 aa15.64■□□□□ 0.09
SHKBP1-213ENST00000597325 NFIXQ14938 502 aa15.64■□□□□ 0.09
SHKBP1-213ENST00000597325 CNTROBQ8N137 903 aa15.64■□□□□ 0.09
SHKBP1-213ENST00000597325 CAPNS2Q96L46 248 aa15.64■□□□□ 0.09
SHKBP1-213ENST00000597325 GPR101Q96P66 508 aaPredicted RBP15.64■□□□□ 0.09
SHKBP1-213ENST00000597325 THUMPD2Q9BTF0 503 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-213ENST00000597325 SCN11AQ9UI33 1791 aa15.64■□□□□ 0.09
SHKBP1-213ENST00000597325 TJP1Q07157 1748 aa15.63■□□□□ 0.09
SHKBP1-213ENST00000597325 ERVV-2B6SEH9 535 aa15.63■□□□□ 0.09
SHKBP1-213ENST00000597325 E9PSI1 815 aa15.63■□□□□ 0.09
SHKBP1-213ENST00000597325 H0YIN7 160 aa15.63■□□□□ 0.09
SHKBP1-213ENST00000597325 C21orf2O43822 256 aa15.63■□□□□ 0.09
SHKBP1-213ENST00000597325 USPL1Q5W0Q7 1092 aa15.63■□□□□ 0.09
SHKBP1-213ENST00000597325 MYH16Q9H6N6 1097 aa15.63■□□□□ 0.09
SHKBP1-213ENST00000597325 ABT1Q9ULW3 272 aaKnown RBP15.63■□□□□ 0.09
SHKBP1-213ENST00000597325 CEMIPQ8WUJ3 1361 aa15.62■□□□□ 0.09
SHKBP1-213ENST00000597325 A0A0C4DFX4 3053 aa15.62■□□□□ 0.09
SHKBP1-213ENST00000597325 RNMTO43148 476 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-213ENST00000597325 TEFQ10587 303 aa15.62■□□□□ 0.09
SHKBP1-213ENST00000597325 EAPPQ56P03 285 aaPredicted RBP15.62■□□□□ 0.09
SHKBP1-213ENST00000597325 MAP1SQ66K74 1059 aaPredicted RBP15.62■□□□□ 0.09
SHKBP1-213ENST00000597325 INTS5Q6P9B9 1019 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-213ENST00000597325 TAOK3Q9H2K8 898 aa15.62■□□□□ 0.09
SHKBP1-213ENST00000597325 LAS1LQ9Y4W2 734 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-213ENST00000597325 ANKRD31Q8N7Z5 1873 aa15.61■□□□□ 0.09
SHKBP1-213ENST00000597325 MRC1P22897 1456 aa15.61■□□□□ 0.09
SHKBP1-213ENST00000597325 SERPINB2P05120 415 aa15.61■□□□□ 0.09
SHKBP1-213ENST00000597325 ECE1P42892 770 aa15.61■□□□□ 0.09
SHKBP1-213ENST00000597325 GNAI1P63096 354 aa15.61■□□□□ 0.09
SHKBP1-213ENST00000597325 DGKZQ13574 1117 aa15.61■□□□□ 0.09
SHKBP1-213ENST00000597325 CYP4F22Q6NT55 531 aa15.61■□□□□ 0.09
SHKBP1-213ENST00000597325 DDX21Q9NR30 783 aaKnown RBP eCLIP15.61■□□□□ 0.09
SHKBP1-213ENST00000597325 IFT57Q9NWB7 429 aa15.61■□□□□ 0.09
SHKBP1-213ENST00000597325 SZT2Q5T011 3432 aa15.6■□□□□ 0.09
SHKBP1-213ENST00000597325 ZPR1O75312 459 aa15.6■□□□□ 0.09
SHKBP1-213ENST00000597325 IL17REQ8NFR9 667 aa15.6■□□□□ 0.09
SHKBP1-213ENST00000597325 CDCA7LQ96GN5 454 aa15.6■□□□□ 0.09
SHKBP1-213ENST00000597325 COL11A2P13942 1736 aaPredicted RBP15.6■□□□□ 0.09
SHKBP1-213ENST00000597325 CA12O43570 354 aa15.59■□□□□ 0.09
SHKBP1-213ENST00000597325 EPHX2P34913 555 aa15.59■□□□□ 0.09
SHKBP1-213ENST00000597325 MAP2K2P36507 400 aa15.59■□□□□ 0.09
SHKBP1-213ENST00000597325 SLFN5Q08AF3 891 aa15.59■□□□□ 0.09
SHKBP1-213ENST00000597325 BCL2L12Q9HB09 334 aa15.59■□□□□ 0.09
SHKBP1-213ENST00000597325 LGR6Q9HBX8 967 aa15.59■□□□□ 0.09
SHKBP1-213ENST00000597325 ZNF219Q9P2Y4 722 aaPredicted RBP15.59■□□□□ 0.09
SHKBP1-213ENST00000597325 HACL1Q9UJ83 578 aa15.59■□□□□ 0.09
SHKBP1-213ENST00000597325 CLEC11AQ9Y240 323 aa15.59■□□□□ 0.09
SHKBP1-213ENST00000597325 SIPA1L3O60292 1781 aaPredicted RBP15.58■□□□□ 0.08
SHKBP1-213ENST00000597325 PTCD1O75127 700 aaKnown RBP15.58■□□□□ 0.08
SHKBP1-213ENST00000597325 SOX10P56693 466 aa15.58■□□□□ 0.08
SHKBP1-213ENST00000597325 CABP4P57796 275 aa15.58■□□□□ 0.08
SHKBP1-213ENST00000597325 PNMA8AQ86V59 439 aaPredicted RBP15.58■□□□□ 0.08
SHKBP1-213ENST00000597325 FANCIQ9NVI1 1328 aa15.58■□□□□ 0.08
SHKBP1-213ENST00000597325 AOC2O75106 756 aa15.57■□□□□ 0.08
SHKBP1-213ENST00000597325 TAF7Q15545 349 aaPredicted RBP15.57■□□□□ 0.08
SHKBP1-213ENST00000597325 SLC52A2Q9HAB3 445 aa15.57■□□□□ 0.08
SHKBP1-213ENST00000597325 NARFQ9UHQ1 456 aa15.57■□□□□ 0.08
SHKBP1-213ENST00000597325 TSPYL4Q9UJ04 414 aa15.57■□□□□ 0.08
SHKBP1-213ENST00000597325 SOS1Q07889 1333 aaPredicted RBP15.57■□□□□ 0.08
SHKBP1-213ENST00000597325 SLX4Q8IY92 1834 aa15.57■□□□□ 0.08
SHKBP1-213ENST00000597325 FMR1Q06787 632 aaKnown RBP eCLIP15.56■□□□□ 0.08
SHKBP1-213ENST00000597325 TSR2Q969E8 191 aaKnown RBP15.56■□□□□ 0.08
SHKBP1-213ENST00000597325 ZNF622Q969S3 477 aaKnown RBP eCLIP15.56■□□□□ 0.08
SHKBP1-213ENST00000597325 SPINK5Q9NQ38 1064 aaPredicted RBP15.56■□□□□ 0.08
SHKBP1-213ENST00000597325 BABAM1Q9NWV8 329 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms