RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 KLRG1Q96E93 195 aa14.11□□□□□ -0.15
CHMP2A-202ENST00000596708 ARFGEF2Q9Y6D5 1785 aa14.11□□□□□ -0.15
CHMP2A-202ENST00000596708 CAMTA2O94983 1202 aa14.1□□□□□ -0.15
CHMP2A-202ENST00000596708 MCM10Q7L590 875 aa14.1□□□□□ -0.15
CHMP2A-202ENST00000596708 CNBD1Q8NA66 436 aa14.1□□□□□ -0.15
CHMP2A-202ENST00000596708 PRAMEF22A3QJZ6 481 aa14.09□□□□□ -0.15
CHMP2A-202ENST00000596708 SNRPA1P09661 255 aaKnown RBP14.09□□□□□ -0.15
CHMP2A-202ENST00000596708 PPP2R1AP30153 589 aa14.09□□□□□ -0.15
CHMP2A-202ENST00000596708 ERFEQ4G0M1 354 aa14.09□□□□□ -0.15
CHMP2A-202ENST00000596708 CNKSR1Q969H4 720 aa14.09□□□□□ -0.15
CHMP2A-202ENST00000596708 DCTN1Q14203 1278 aa14.08□□□□□ -0.16
CHMP2A-202ENST00000596708 NUP98P52948 1817 aa14.07□□□□□ -0.16
CHMP2A-202ENST00000596708 STYK1Q6J9G0 422 aa14.07□□□□□ -0.16
CHMP2A-202ENST00000596708 NBPF5PQ86XG9 351 aaPredicted RBP14.07□□□□□ -0.16
CHMP2A-202ENST00000596708 MASTLQ96GX5 879 aa14.07□□□□□ -0.16
CHMP2A-202ENST00000596708 TAOK3Q9H2K8 898 aa14.07□□□□□ -0.16
CHMP2A-202ENST00000596708 ZNF652Q9Y2D9 606 aa14.07□□□□□ -0.16
CHMP2A-202ENST00000596708 NEFMP07197 916 aa14.06□□□□□ -0.16
CHMP2A-202ENST00000596708 SRGNP10124 158 aa14.06□□□□□ -0.16
CHMP2A-202ENST00000596708 CLEC4GQ6UXB4 293 aa14.06□□□□□ -0.16
CHMP2A-202ENST00000596708 FAM177BA6PVY3 158 aa14.05□□□□□ -0.16
CHMP2A-202ENST00000596708 HTATSF1O43719 755 aaKnown RBP14.05□□□□□ -0.16
CHMP2A-202ENST00000596708 SOGA3Q5TF21 947 aa14.05□□□□□ -0.16
CHMP2A-202ENST00000596708 PRPF40BQ6NWY9 871 aaKnown RBP14.05□□□□□ -0.16
CHMP2A-202ENST00000596708 JMYQ8N9B5 988 aa14.05□□□□□ -0.16
CHMP2A-202ENST00000596708 LAMB4A4D0S4 1761 aa14.04□□□□□ -0.16
CHMP2A-202ENST00000596708 POTECB2RU33 542 aa14.04□□□□□ -0.16
CHMP2A-202ENST00000596708 TAF7Q15545 349 aaPredicted RBP14.04□□□□□ -0.16
CHMP2A-202ENST00000596708 TPTE2Q6XPS3 522 aa14.04□□□□□ -0.16
CHMP2A-202ENST00000596708 MIS18AQ9NYP9 233 aa14.04□□□□□ -0.16
CHMP2A-202ENST00000596708 NIP7Q9Y221 180 aaKnown RBP eCLIP14.04□□□□□ -0.16
CHMP2A-202ENST00000596708 SCN4AP35499 1836 aa14.04□□□□□ -0.16
CHMP2A-202ENST00000596708 DDNO94850 711 aaPredicted RBP14.03□□□□□ -0.16
CHMP2A-202ENST00000596708 GTF2E1P29083 439 aaPredicted RBP14.03□□□□□ -0.16
CHMP2A-202ENST00000596708 LTBP3Q9NS15 1303 aa14.03□□□□□ -0.16
CHMP2A-202ENST00000596708 KDM3BQ7LBC6 1761 aa14.02□□□□□ -0.16
CHMP2A-202ENST00000596708 NBPF26B4DH59 902 aa14.02□□□□□ -0.17
CHMP2A-202ENST00000596708 NPR1P16066 1061 aa14.02□□□□□ -0.17
CHMP2A-202ENST00000596708 NBPF10Q6P3W6 841 aaKnown RBP14.02□□□□□ -0.17
CHMP2A-202ENST00000596708 NGEFQ8N5V2 710 aa14.02□□□□□ -0.17
CHMP2A-202ENST00000596708 NBPF15Q8N660 670 aa14.02□□□□□ -0.17
CHMP2A-202ENST00000596708 HLFQ16534 295 aa14.01□□□□□ -0.17
CHMP2A-202ENST00000596708 CCDC93Q567U6 631 aa14.01□□□□□ -0.17
CHMP2A-202ENST00000596708 PNISRQ8TF01 805 aaKnown RBP14□□□□□ -0.17
CHMP2A-202ENST00000596708 ALDH1B1P30837 517 aa13.99□□□□□ -0.17
CHMP2A-202ENST00000596708 COL13A1Q5TAT6 717 aaPredicted RBP13.99□□□□□ -0.17
CHMP2A-202ENST00000596708 CHADLQ6NUI6 762 aa13.99□□□□□ -0.17
CHMP2A-202ENST00000596708 C7orf43Q8WVR3 580 aa13.99□□□□□ -0.17
CHMP2A-202ENST00000596708 RRP7AQ9Y3A4 280 aaKnown RBP13.99□□□□□ -0.17
CHMP2A-202ENST00000596708 KLRG2A4D1S0 409 aaPredicted RBP13.98□□□□□ -0.17
CHMP2A-202ENST00000596708 RGL2O15211 777 aa13.98□□□□□ -0.17
CHMP2A-202ENST00000596708 FKBP4Q02790 459 aaKnown RBP eCLIP13.98□□□□□ -0.17
CHMP2A-202ENST00000596708 ZNF277Q9NRM2 450 aaPredicted RBP13.98□□□□□ -0.17
CHMP2A-202ENST00000596708 IQCA1LA6NCM1 817 aa13.97□□□□□ -0.17
CHMP2A-202ENST00000596708 POTEIP0CG38 1075 aa13.97□□□□□ -0.17
CHMP2A-202ENST00000596708 POTEJP0CG39 1038 aa13.97□□□□□ -0.17
CHMP2A-202ENST00000596708 HSPA1AP0DMV8 641 aaKnown RBP13.97□□□□□ -0.17
CHMP2A-202ENST00000596708 HSPA1BP0DMV9 641 aaKnown RBP13.97□□□□□ -0.17
CHMP2A-202ENST00000596708 OLFM4Q6UX06 510 aa13.97□□□□□ -0.17
CHMP2A-202ENST00000596708 RTKN2Q8IZC4 609 aa13.97□□□□□ -0.17
CHMP2A-202ENST00000596708 NYXQ9GZU5 481 aa13.97□□□□□ -0.17
CHMP2A-202ENST00000596708 MYL6BP14649 208 aa13.96□□□□□ -0.17
CHMP2A-202ENST00000596708 EIF4A1P60842 406 aaKnown RBP13.96□□□□□ -0.17
CHMP2A-202ENST00000596708 KIF6Q6ZMV9 814 aa13.96□□□□□ -0.17
CHMP2A-202ENST00000596708 NUTM1Q86Y26 1132 aa13.96□□□□□ -0.17
CHMP2A-202ENST00000596708 SYNE4Q8N205 404 aa13.96□□□□□ -0.17
CHMP2A-202ENST00000596708 PNNQ9H307 717 aaKnown RBP13.96□□□□□ -0.17
CHMP2A-202ENST00000596708 MAP3K15Q6ZN16 1313 aa13.95□□□□□ -0.18
CHMP2A-202ENST00000596708 MAPK8IP3Q9UPT6 1336 aa13.95□□□□□ -0.18
CHMP2A-202ENST00000596708 ERVV-1B6SEH8 477 aa13.95□□□□□ -0.18
CHMP2A-202ENST00000596708 NFE2L2Q16236 605 aa13.95□□□□□ -0.18
CHMP2A-202ENST00000596708 EAPPQ56P03 285 aaPredicted RBP13.95□□□□□ -0.18
CHMP2A-202ENST00000596708 TTLL7Q6ZT98 887 aa13.95□□□□□ -0.18
CHMP2A-202ENST00000596708 TNS4Q8IZW8 715 aa13.95□□□□□ -0.18
CHMP2A-202ENST00000596708 PLEKHF1Q96S99 279 aa13.95□□□□□ -0.18
CHMP2A-202ENST00000596708 THUMPD2Q9BTF0 503 aaKnown RBP13.95□□□□□ -0.18
CHMP2A-202ENST00000596708 TAF1DQ9H5J8 278 aaPredicted RBP13.95□□□□□ -0.18
CHMP2A-202ENST00000596708 CREBZFQ9NS37 354 aa13.95□□□□□ -0.18
CHMP2A-202ENST00000596708 MKRN1Q9UHC7 482 aaKnown RBP13.95□□□□□ -0.18
CHMP2A-202ENST00000596708 CLEC11AQ9Y240 323 aa13.95□□□□□ -0.18
CHMP2A-202ENST00000596708 CAPN15O75808 1086 aa13.94□□□□□ -0.18
CHMP2A-202ENST00000596708 GPTP24298 496 aa13.94□□□□□ -0.18
CHMP2A-202ENST00000596708 IARSP41252 1262 aaKnown RBP13.94□□□□□ -0.18
CHMP2A-202ENST00000596708 LDHDQ86WU2 507 aa13.94□□□□□ -0.18
CHMP2A-202ENST00000596708 L3MBTL3Q96JM7 780 aaPredicted RBP13.94□□□□□ -0.18
CHMP2A-202ENST00000596708 ZBTB3Q9H5J0 574 aa13.94□□□□□ -0.18
CHMP2A-202ENST00000596708 ZNF541Q9H0D2 1346 aa13.93□□□□□ -0.18
CHMP2A-202ENST00000596708 RPGRQ92834 1020 aaKnown RBP13.93□□□□□ -0.18
CHMP2A-202ENST00000596708 HACL1Q9UJ83 578 aa13.93□□□□□ -0.18
CHMP2A-202ENST00000596708 SUSD4Q5VX71 490 aa13.92□□□□□ -0.18
CHMP2A-202ENST00000596708 JDP2Q8WYK2 163 aa13.92□□□□□ -0.18
CHMP2A-202ENST00000596708 ABCC12Q96J65 1359 aa13.92□□□□□ -0.18
CHMP2A-202ENST00000596708 TCERG1O14776 1098 aaKnown RBP13.91□□□□□ -0.18
CHMP2A-202ENST00000596708 EIF2S2P20042 333 aaKnown RBP13.91□□□□□ -0.18
CHMP2A-202ENST00000596708 EPHX2P34913 555 aa13.91□□□□□ -0.18
CHMP2A-202ENST00000596708 CRY2Q49AN0 593 aa13.91□□□□□ -0.18
CHMP2A-202ENST00000596708 CC2D2BQ6DHV5 1058 aa13.91□□□□□ -0.18
CHMP2A-202ENST00000596708 RBM17Q96I25 401 aaKnown RBP13.91□□□□□ -0.18
CHMP2A-202ENST00000596708 TSPYL4Q9UJ04 414 aa13.91□□□□□ -0.18
CHMP2A-202ENST00000596708 RNF123Q5XPI4 1314 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms