RNA–Protein interactions for RNA: ENST00000595514.1

NOTCH3-203, Transcript of notch 3, humanhuman

TSL 3

Gene NOTCH3, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-203ENST00000595514 AOC2O75106 756 aa14.1□□□□□ -0.15
NOTCH3-203ENST00000595514 CCDC93Q567U6 631 aa14.1□□□□□ -0.15
NOTCH3-203ENST00000595514 PRR5LQ6MZQ0 368 aa14.1□□□□□ -0.15
NOTCH3-203ENST00000595514 POLKQ9UBT6 870 aa14.1□□□□□ -0.15
NOTCH3-203ENST00000595514 SOX10P56693 466 aa14.09□□□□□ -0.15
NOTCH3-203ENST00000595514 TBC1D9BQ66K14 1250 aa14.09□□□□□ -0.15
NOTCH3-203ENST00000595514 ZNF277Q9NRM2 450 aaPredicted RBP14.09□□□□□ -0.15
NOTCH3-203ENST00000595514 ANKRD26Q9UPS8 1709 aa14.09□□□□□ -0.15
NOTCH3-203ENST00000595514 SRGNP10124 158 aa14.08□□□□□ -0.16
NOTCH3-203ENST00000595514 CANXP27824 592 aaKnown RBP14.08□□□□□ -0.16
NOTCH3-203ENST00000595514 FKBP4Q02790 459 aaKnown RBP eCLIP14.08□□□□□ -0.16
NOTCH3-203ENST00000595514 MASTLQ96GX5 879 aa14.08□□□□□ -0.16
NOTCH3-203ENST00000595514 CARD14Q9BXL6 1004 aa14.08□□□□□ -0.16
NOTCH3-203ENST00000595514 TLL2Q9Y6L7 1015 aa14.08□□□□□ -0.16
NOTCH3-203ENST00000595514 LTBP1Q14766 1721 aa14.07□□□□□ -0.16
NOTCH3-203ENST00000595514 A0A087WZG4 1122 aa14.07□□□□□ -0.16
NOTCH3-203ENST00000595514 BRPF1P55201 1214 aaPredicted RBP14.07□□□□□ -0.16
NOTCH3-203ENST00000595514 ST5P78524 1137 aa14.07□□□□□ -0.16
NOTCH3-203ENST00000595514 FMR1Q06787 632 aaKnown RBP eCLIP14.07□□□□□ -0.16
NOTCH3-203ENST00000595514 GPC2Q8N158 579 aa14.07□□□□□ -0.16
NOTCH3-203ENST00000595514 CNBD1Q8NA66 436 aa14.07□□□□□ -0.16
NOTCH3-203ENST00000595514 LMOD1P29536 600 aaPredicted RBP14.06□□□□□ -0.16
NOTCH3-203ENST00000595514 CST9Q5W186 159 aa14.06□□□□□ -0.16
NOTCH3-203ENST00000595514 COL11A2P13942 1736 aaPredicted RBP14.06□□□□□ -0.16
NOTCH3-203ENST00000595514 CDCA8Q53HL2 280 aa14.05□□□□□ -0.16
NOTCH3-203ENST00000595514 SLC52A2Q9HAB3 445 aa14.05□□□□□ -0.16
NOTCH3-203ENST00000595514 ANKRD31Q8N7Z5 1873 aa14.05□□□□□ -0.16
NOTCH3-203ENST00000595514 SLX4Q8IY92 1834 aa14.04□□□□□ -0.16
NOTCH3-203ENST00000595514 CASP8AP2Q9UKL3 1982 aa14.04□□□□□ -0.16
NOTCH3-203ENST00000595514 FZD9O00144 591 aa14.04□□□□□ -0.16
NOTCH3-203ENST00000595514 TRAF5O00463 557 aa14.04□□□□□ -0.16
NOTCH3-203ENST00000595514 TNNT2P45379 298 aaPredicted RBP14.04□□□□□ -0.16
NOTCH3-203ENST00000595514 EIF5P55010 431 aaKnown RBP14.04□□□□□ -0.16
NOTCH3-203ENST00000595514 SLC39A6Q13433 755 aa14.04□□□□□ -0.16
NOTCH3-203ENST00000595514 RTKN2Q8IZC4 609 aa14.04□□□□□ -0.16
NOTCH3-203ENST00000595514 C7orf43Q8WVR3 580 aa14.04□□□□□ -0.16
NOTCH3-203ENST00000595514 SETDB2Q96T68 719 aa14.04□□□□□ -0.16
NOTCH3-203ENST00000595514 STARD3NLO95772 234 aa14.03□□□□□ -0.16
NOTCH3-203ENST00000595514 IARSP41252 1262 aaKnown RBP14.03□□□□□ -0.16
NOTCH3-203ENST00000595514 CIAPIN1Q6FI81 312 aa14.03□□□□□ -0.16
NOTCH3-203ENST00000595514 VSIG10Q8N0Z9 540 aa14.03□□□□□ -0.16
NOTCH3-203ENST00000595514 JDP2Q8WYK2 163 aa14.03□□□□□ -0.16
NOTCH3-203ENST00000595514 GJA3Q9Y6H8 435 aa14.03□□□□□ -0.16
NOTCH3-203ENST00000595514 EIF6P56537 245 aaKnown RBP14.02□□□□□ -0.17
NOTCH3-203ENST00000595514 SAPCD2Q86UD0 394 aa14.02□□□□□ -0.17
NOTCH3-203ENST00000595514 AEBP1Q8IUX7 1158 aa14.02□□□□□ -0.17
NOTCH3-203ENST00000595514 GCC1Q96CN9 775 aa14.02□□□□□ -0.17
NOTCH3-203ENST00000595514 ZNF330Q9Y3S2 320 aaPredicted RBP14.02□□□□□ -0.17
NOTCH3-203ENST00000595514 SYNE4Q8N205 404 aa14.01□□□□□ -0.17
NOTCH3-203ENST00000595514 TBC1D2BQ9UPU7 963 aa14.01□□□□□ -0.17
NOTCH3-203ENST00000595514 CELF2O95319 508 aaKnown RBP14□□□□□ -0.17
NOTCH3-203ENST00000595514 NPR1P16066 1061 aa14□□□□□ -0.17
NOTCH3-203ENST00000595514 AKAP4Q5JQC9 854 aa14□□□□□ -0.17
NOTCH3-203ENST00000595514 USP50Q70EL3 339 aaPredicted RBP14□□□□□ -0.17
NOTCH3-203ENST00000595514 NPM2Q86SE8 214 aaKnown RBP14□□□□□ -0.17
NOTCH3-203ENST00000595514 HHIPL1Q96JK4 782 aa14□□□□□ -0.17
NOTCH3-203ENST00000595514 EPS15P42566 896 aa13.99□□□□□ -0.17
NOTCH3-203ENST00000595514 OLFM4Q6UX06 510 aa13.99□□□□□ -0.17
NOTCH3-203ENST00000595514 NBPF15Q8N660 670 aa13.99□□□□□ -0.17
NOTCH3-203ENST00000595514 SCNN1DP51172 638 aa13.98□□□□□ -0.17
NOTCH3-203ENST00000595514 NOGQ13253 232 aa13.98□□□□□ -0.17
NOTCH3-203ENST00000595514 SULT6B1Q6IMI4 303 aa13.98□□□□□ -0.17
NOTCH3-203ENST00000595514 LGR6Q9HBX8 967 aa13.98□□□□□ -0.17
NOTCH3-203ENST00000595514 CACNA1SQ13698 1873 aa13.97□□□□□ -0.17
NOTCH3-203ENST00000595514 ARFGEF2Q9Y6D5 1785 aa13.97□□□□□ -0.17
NOTCH3-203ENST00000595514 RNMTO43148 476 aaKnown RBP13.97□□□□□ -0.17
NOTCH3-203ENST00000595514 NBPF5PQ86XG9 351 aaPredicted RBP13.97□□□□□ -0.17
NOTCH3-203ENST00000595514 IL6STP40189 918 aaPredicted RBP13.96□□□□□ -0.17
NOTCH3-203ENST00000595514 TTC5Q8N0Z6 440 aa13.96□□□□□ -0.17
NOTCH3-203ENST00000595514 PSMD1Q99460 953 aa13.96□□□□□ -0.17
NOTCH3-203ENST00000595514 ZNF408Q9H9D4 720 aa13.96□□□□□ -0.17
NOTCH3-203ENST00000595514 TRPM7Q96QT4 1865 aa13.95□□□□□ -0.18
NOTCH3-203ENST00000595514 SCN7AQ01118 1682 aa13.95□□□□□ -0.18
NOTCH3-203ENST00000595514 MRC1P22897 1456 aa13.95□□□□□ -0.18
NOTCH3-203ENST00000595514 CAMTA2O94983 1202 aa13.95□□□□□ -0.18
NOTCH3-203ENST00000595514 SCN11AQ9UI33 1791 aa13.95□□□□□ -0.18
NOTCH3-203ENST00000595514 HSPA5P11021 654 aaKnown RBP13.94□□□□□ -0.18
NOTCH3-203ENST00000595514 ALDH1B1P30837 517 aa13.94□□□□□ -0.18
NOTCH3-203ENST00000595514 EIF4G2P78344 907 aaKnown RBP eCLIP13.94□□□□□ -0.18
NOTCH3-203ENST00000595514 ZIC5Q96T25 663 aa13.94□□□□□ -0.18
NOTCH3-203ENST00000595514 TEX13AQ9BXU3 409 aaPredicted RBP13.94□□□□□ -0.18
NOTCH3-203ENST00000595514 GLIS2Q9BZE0 524 aaPredicted RBP13.94□□□□□ -0.18
NOTCH3-203ENST00000595514 ADARB2Q9NS39 739 aaKnown RBP13.94□□□□□ -0.18
NOTCH3-203ENST00000595514 SAGE1Q9NXZ1 904 aa13.94□□□□□ -0.18
NOTCH3-203ENST00000595514 KLRG2A4D1S0 409 aaPredicted RBP13.93□□□□□ -0.18
NOTCH3-203ENST00000595514 HABP4Q5JVS0 413 aaKnown RBP13.93□□□□□ -0.18
NOTCH3-203ENST00000595514 CTU1Q7Z7A3 348 aaKnown RBP13.93□□□□□ -0.18
NOTCH3-203ENST00000595514 LARGE2Q8N3Y3 721 aa13.93□□□□□ -0.18
NOTCH3-203ENST00000595514 DZIP3Q86Y13 1208 aaKnown RBP13.92□□□□□ -0.18
NOTCH3-203ENST00000595514 HUNKP57058 714 aa13.91□□□□□ -0.18
NOTCH3-203ENST00000595514 CC2D2BQ6DHV5 1058 aa13.91□□□□□ -0.18
NOTCH3-203ENST00000595514 TPTE2Q6XPS3 522 aa13.91□□□□□ -0.18
NOTCH3-203ENST00000595514 GPRC5DQ9NZD1 345 aa13.91□□□□□ -0.18
NOTCH3-203ENST00000595514 TRPA1O75762 1119 aa13.9□□□□□ -0.18
NOTCH3-203ENST00000595514 A1BGP04217 495 aa13.9□□□□□ -0.18
NOTCH3-203ENST00000595514 NIM1KQ8IY84 436 aa13.9□□□□□ -0.18
NOTCH3-203ENST00000595514 ZNF496Q96IT1 587 aaPredicted RBP13.9□□□□□ -0.18
NOTCH3-203ENST00000595514 POLR3GLQ9BT43 218 aa13.9□□□□□ -0.18
NOTCH3-203ENST00000595514 HPS5Q9UPZ3 1129 aa13.9□□□□□ -0.18
NOTCH3-203ENST00000595514 ZNF652Q9Y2D9 606 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms