RNA–Protein interactions for RNA: ENST00000594552.5

CAPN12-204, Transcript of calpain 12, humanhuman

TSL 2

Gene CAPN12, Length 1,046 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-204ENST00000594552 PDE6BP35913 854 aa17.16■□□□□ 0.34
CAPN12-204ENST00000594552 ZNF622Q969S3 477 aaKnown RBP eCLIP17.16■□□□□ 0.347e-7■■■□□ 14.8
CAPN12-204ENST00000594552 PDZRN3Q9UPQ7 1066 aa17.16■□□□□ 0.34
CAPN12-204ENST00000594552 LAMB4A4D0S4 1761 aa17.15■□□□□ 0.34
CAPN12-204ENST00000594552 KIF3CO14782 793 aa17.15■□□□□ 0.34
CAPN12-204ENST00000594552 HSPA6P17066 643 aa17.15■□□□□ 0.34
CAPN12-204ENST00000594552 PIP4K2AP48426 406 aaPredicted RBP17.15■□□□□ 0.34
CAPN12-204ENST00000594552 TAF7Q15545 349 aaPredicted RBP17.15■□□□□ 0.34
CAPN12-204ENST00000594552 PNISRQ8TF01 805 aaKnown RBP17.15■□□□□ 0.34
CAPN12-204ENST00000594552 DLG5Q8TDM6 1919 aa17.14■□□□□ 0.33
CAPN12-204ENST00000594552 CAMTA2O94983 1202 aa17.14■□□□□ 0.33
CAPN12-204ENST00000594552 RASSF7Q02833 373 aa17.14■□□□□ 0.33
CAPN12-204ENST00000594552 USP16Q9Y5T5 823 aa17.14■□□□□ 0.33
CAPN12-204ENST00000594552 PRR5LQ6MZQ0 368 aa17.13■□□□□ 0.33
CAPN12-204ENST00000594552 BRIP1Q9BX63 1249 aa17.13■□□□□ 0.33
CAPN12-204ENST00000594552 NMRK2Q9NPI5 230 aa17.13■□□□□ 0.33
CAPN12-204ENST00000594552 TNRC6CQ9HCJ0 1690 aaKnown RBP17.13■□□□□ 0.33
CAPN12-204ENST00000594552 ANKRD31Q8N7Z5 1873 aa17.12■□□□□ 0.33
CAPN12-204ENST00000594552 PRAMEF22A3QJZ6 481 aa17.12■□□□□ 0.33
CAPN12-204ENST00000594552 TOMM70O94826 608 aa17.12■□□□□ 0.33
CAPN12-204ENST00000594552 NFE2L2Q16236 605 aa17.12■□□□□ 0.33
CAPN12-204ENST00000594552 NBPF5PQ86XG9 351 aaPredicted RBP17.12■□□□□ 0.33
CAPN12-204ENST00000594552 COL11A2P13942 1736 aaPredicted RBP17.12■□□□□ 0.33
CAPN12-204ENST00000594552 TIAM2Q8IVF5 1701 aa17.11■□□□□ 0.33
CAPN12-204ENST00000594552 LMNB1P20700 586 aa17.11■□□□□ 0.33
CAPN12-204ENST00000594552 CCDC24Q8N4L8 307 aa17.11■□□□□ 0.33
CAPN12-204ENST00000594552 ZC3H4Q9UPT8 1303 aaKnown RBP17.11■□□□□ 0.33
CAPN12-204ENST00000594552 KDM3BQ7LBC6 1761 aa17.1■□□□□ 0.33
CAPN12-204ENST00000594552 SBF1O95248 1867 aa17.1■□□□□ 0.33
CAPN12-204ENST00000594552 CLEC4GQ6UXB4 293 aa17.1■□□□□ 0.33
CAPN12-204ENST00000594552 PLEKHF1Q96S99 279 aa17.1■□□□□ 0.33
CAPN12-204ENST00000594552 CACNA1SQ13698 1873 aa17.1■□□□□ 0.33
CAPN12-204ENST00000594552 ANP32CO43423 234 aa17.09■□□□□ 0.33
CAPN12-204ENST00000594552 WDR43Q15061 677 aaKnown RBP eCLIP17.09■□□□□ 0.33
CAPN12-204ENST00000594552 CNKSR1Q969H4 720 aa17.09■□□□□ 0.33
CAPN12-204ENST00000594552 MIS18AQ9NYP9 233 aa17.09■□□□□ 0.33
CAPN12-204ENST00000594552 GTF2E1P29083 439 aaPredicted RBP17.08■□□□□ 0.32
CAPN12-204ENST00000594552 LMOD3Q0VAK6 560 aa17.08■□□□□ 0.32
CAPN12-204ENST00000594552 KIF6Q6ZMV9 814 aa17.08■□□□□ 0.32
CAPN12-204ENST00000594552 NIP7Q9Y221 180 aaKnown RBP eCLIP17.08■□□□□ 0.32
CAPN12-204ENST00000594552 C21orf2O43822 256 aa17.07■□□□□ 0.32
CAPN12-204ENST00000594552 APLP1P51693 650 aa17.07■□□□□ 0.32
CAPN12-204ENST00000594552 SOGA3Q5TF21 947 aa17.07■□□□□ 0.32
CAPN12-204ENST00000594552 NGEFQ8N5V2 710 aa17.07■□□□□ 0.32
CAPN12-204ENST00000594552 FAM177BA6PVY3 158 aa17.06■□□□□ 0.32
CAPN12-204ENST00000594552 RGL2O15211 777 aa17.06■□□□□ 0.32
CAPN12-204ENST00000594552 STYK1Q6J9G0 422 aa17.06■□□□□ 0.32
CAPN12-204ENST00000594552 TPTE2Q6XPS3 522 aa17.06■□□□□ 0.32
CAPN12-204ENST00000594552 RBM46Q8TBY0 533 aaKnown RBP17.06■□□□□ 0.32
CAPN12-204ENST00000594552 MASTLQ96GX5 879 aa17.06■□□□□ 0.32
CAPN12-204ENST00000594552 THUMPD2Q9BTF0 503 aaKnown RBP17.06■□□□□ 0.32
CAPN12-204ENST00000594552 TSPYL4Q9UJ04 414 aa17.06■□□□□ 0.32
CAPN12-204ENST00000594552 NBPF26B4DH59 902 aa17.05■□□□□ 0.32
CAPN12-204ENST00000594552 PRPF40BQ6NWY9 871 aaKnown RBP17.05■□□□□ 0.32
CAPN12-204ENST00000594552 NBPF10Q6P3W6 841 aaKnown RBP17.05■□□□□ 0.32
CAPN12-204ENST00000594552 NBPF15Q8N660 670 aa17.05■□□□□ 0.32
CAPN12-204ENST00000594552 TAOK3Q9H2K8 898 aa17.05■□□□□ 0.32
CAPN12-204ENST00000594552 RRAGCQ9HB90 399 aa17.05■□□□□ 0.32
CAPN12-204ENST00000594552 CCDC88AQ3V6T2 1871 aa17.05■□□□□ 0.32
CAPN12-204ENST00000594552 ARFGEF2Q9Y6D5 1785 aa17.05■□□□□ 0.32
CAPN12-204ENST00000594552 NFKBIEO00221 500 aa17.04■□□□□ 0.32
CAPN12-204ENST00000594552 SRGNP10124 158 aa17.04■□□□□ 0.32
CAPN12-204ENST00000594552 MYL6BP14649 208 aa17.04■□□□□ 0.32
CAPN12-204ENST00000594552 MKRN4PQ13434 485 aaPredicted RBP17.04■□□□□ 0.32
CAPN12-204ENST00000594552 RRP7AQ9Y3A4 280 aaKnown RBP17.04■□□□□ 0.32
CAPN12-204ENST00000594552 RIPK4P57078 832 aa17.03■□□□□ 0.32
CAPN12-204ENST00000594552 EIF4A1P60842 406 aaKnown RBP17.03■□□□□ 0.32
CAPN12-204ENST00000594552 FSTL1Q12841 308 aa17.03■□□□□ 0.32
CAPN12-204ENST00000594552 ERFEQ4G0M1 354 aa17.03■□□□□ 0.32
CAPN12-204ENST00000594552 DPY19L2Q6NUT2 758 aa17.03■□□□□ 0.32
CAPN12-204ENST00000594552 NYXQ9GZU5 481 aa17.03■□□□□ 0.32
CAPN12-204ENST00000594552 FER1L6Q2WGJ9 1857 aa17.02■□□□□ 0.32
CAPN12-204ENST00000594552 GLTPD2A6NH11 291 aa17.02■□□□□ 0.32
CAPN12-204ENST00000594552 NPR1P16066 1061 aa17.02■□□□□ 0.32
CAPN12-204ENST00000594552 CEP350Q5VT06 3117 aa17.02■□□□□ 0.31
CAPN12-204ENST00000594552 MAP3K15Q6ZN16 1313 aa17.01■□□□□ 0.31
CAPN12-204ENST00000594552 CCDC93Q567U6 631 aa17.01■□□□□ 0.31
CAPN12-204ENST00000594552 SMC1BQ8NDV3 1235 aa17.01■□□□□ 0.31
CAPN12-204ENST00000594552 ADAMTS8Q9UP79 889 aa17.01■□□□□ 0.31
CAPN12-204ENST00000594552 SLX4Q8IY92 1834 aa17■□□□□ 0.31
CAPN12-204ENST00000594552 ERBB4Q15303 1308 aa17■□□□□ 0.31
CAPN12-204ENST00000594552 LTBP3Q9NS15 1303 aa17■□□□□ 0.31
CAPN12-204ENST00000594552 VEGFAP15692 232 aaPredicted RBP17■□□□□ 0.31
CAPN12-204ENST00000594552 HLFQ16534 295 aa17■□□□□ 0.31
CAPN12-204ENST00000594552 RUNDC1Q96C34 613 aa17■□□□□ 0.31
CAPN12-204ENST00000594552 WDR90Q96KV7 1748 aa17■□□□□ 0.31
CAPN12-204ENST00000594552 ZBTB3Q9H5J0 574 aa17■□□□□ 0.31
CAPN12-204ENST00000594552 ERVV-1B6SEH8 477 aa16.99■□□□□ 0.31
CAPN12-204ENST00000594552 TMPOP42166 694 aaKnown RBP16.99■□□□□ 0.31
CAPN12-204ENST00000594552 NEUROD2Q15784 382 aa16.99■□□□□ 0.31
CAPN12-204ENST00000594552 CCDC146Q8IYE0 955 aa16.99■□□□□ 0.31
CAPN12-204ENST00000594552 DICER1Q9UPY3 1922 aaKnown RBP16.99■□□□□ 0.31
CAPN12-204ENST00000594552 NUP98P52948 1817 aa16.98■□□□□ 0.31
CAPN12-204ENST00000594552 EIF2S2P20042 333 aaKnown RBP16.98■□□□□ 0.31
CAPN12-204ENST00000594552 GPTP24298 496 aa16.98■□□□□ 0.31
CAPN12-204ENST00000594552 PRELPP51888 382 aa16.98■□□□□ 0.31
CAPN12-204ENST00000594552 MRS2Q9HD23 443 aa16.98■□□□□ 0.31
CAPN12-204ENST00000594552 ALDH1B1P30837 517 aa16.97■□□□□ 0.31
CAPN12-204ENST00000594552 TTLL7Q6ZT98 887 aa16.97■□□□□ 0.31
CAPN12-204ENST00000594552 RPGRQ92834 1020 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms