RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 NEXNQ0ZGT2 675 aa19.04■□□□□ 0.64
VRK3-207ENST00000594092 FAM196AQ6ZSG2 479 aa19.04■□□□□ 0.64
VRK3-207ENST00000594092 ANKRD44Q8N8A2 993 aa19.04■□□□□ 0.64
VRK3-207ENST00000594092 MYD88Q99836 296 aa19.04■□□□□ 0.64
VRK3-207ENST00000594092 TSHZ2Q9NRE2 1034 aa19.04■□□□□ 0.64
VRK3-207ENST00000594092 CEP85Q6P2H3 762 aa19.04■□□□□ 0.64
VRK3-207ENST00000594092 RPAP2Q8IXW5 612 aaPredicted RBP19.04■□□□□ 0.64
VRK3-207ENST00000594092 NUP188Q5SRE5 1749 aa19.03■□□□□ 0.64
VRK3-207ENST00000594092 UBTFL1P0CB47 393 aaPredicted RBP19.03■□□□□ 0.64
VRK3-207ENST00000594092 CRKLP46109 303 aaKnown RBP19.03■□□□□ 0.64
VRK3-207ENST00000594092 BCL11BQ9C0K0 894 aaPredicted RBP19.03■□□□□ 0.64
VRK3-207ENST00000594092 CCDC87Q9NVE4 849 aa19.03■□□□□ 0.64
VRK3-207ENST00000594092 ZNF330Q9Y3S2 320 aaPredicted RBP19.03■□□□□ 0.64
VRK3-207ENST00000594092 IBTKQ9P2D0 1353 aaPredicted RBP19.03■□□□□ 0.64
VRK3-207ENST00000594092 NEURL1BA8MQ27 555 aa19.02■□□□□ 0.64
VRK3-207ENST00000594092 NBPF7P0C2Y1 421 aaPredicted RBP19.02■□□□□ 0.64
VRK3-207ENST00000594092 INTS5Q6P9B9 1019 aaKnown RBP19.02■□□□□ 0.64
VRK3-207ENST00000594092 RREB1Q92766 1687 aa19.02■□□□□ 0.64
VRK3-207ENST00000594092 IL6STP40189 918 aaPredicted RBP19.02■□□□□ 0.63
VRK3-207ENST00000594092 SKAP1Q86WV1 359 aa19.02■□□□□ 0.63
VRK3-207ENST00000594092 ZBTB3Q9H5J0 574 aa19.02■□□□□ 0.63
VRK3-207ENST00000594092 LRRFIP2Q9Y608 721 aaKnown RBP19.02■□□□□ 0.63
VRK3-207ENST00000594092 COL5A3P25940 1745 aaPredicted RBP19.01■□□□□ 0.63
VRK3-207ENST00000594092 SMC5Q8IY18 1101 aa19.01■□□□□ 0.63
VRK3-207ENST00000594092 POTEAQ6S8J7 498 aa19■□□□□ 0.63
VRK3-207ENST00000594092 LINC00116Q8NCU8 138 aa19■□□□□ 0.63
VRK3-207ENST00000594092 C9orf78Q9NZ63 289 aaPredicted RBP19■□□□□ 0.63
VRK3-207ENST00000594092 MYH14Q7Z406 1995 aaKnown RBP19■□□□□ 0.63
VRK3-207ENST00000594092 KCNQ4P56696 695 aa19■□□□□ 0.63
VRK3-207ENST00000594092 GCKRQ14397 625 aa19■□□□□ 0.63
VRK3-207ENST00000594092 KIF6Q6ZMV9 814 aa19■□□□□ 0.63
VRK3-207ENST00000594092 EP400Q96L91 3159 aa18.99■□□□□ 0.63
VRK3-207ENST00000594092 UTYO14607 1347 aa18.99■□□□□ 0.63
VRK3-207ENST00000594092 ATP5J2-PTCD1G3V325 749 aa18.99■□□□□ 0.63
VRK3-207ENST00000594092 GRM8O00222 908 aa18.99■□□□□ 0.63
VRK3-207ENST00000594092 EIF5P55010 431 aaKnown RBP18.99■□□□□ 0.63
VRK3-207ENST00000594092 LY75O60449 1722 aa18.99■□□□□ 0.63
VRK3-207ENST00000594092 MAP3K15Q6ZN16 1313 aa18.98■□□□□ 0.63
VRK3-207ENST00000594092 PDZRN3Q9UPQ7 1066 aa18.98■□□□□ 0.63
VRK3-207ENST00000594092 AFDNP55196 1824 aaKnown RBP18.98■□□□□ 0.63
VRK3-207ENST00000594092 TRIM37O94972 964 aa18.97■□□□□ 0.63
VRK3-207ENST00000594092 ATP8B2P98198 1209 aa18.97■□□□□ 0.63
VRK3-207ENST00000594092 GCC1Q96CN9 775 aa18.97■□□□□ 0.63
VRK3-207ENST00000594092 ARXQ96QS3 562 aa18.97■□□□□ 0.63
VRK3-207ENST00000594092 CCNL1Q9UK58 526 aaPredicted RBP18.97■□□□□ 0.63
VRK3-207ENST00000594092 HMMRO75330 724 aa18.96■□□□□ 0.63
VRK3-207ENST00000594092 NPM2Q86SE8 214 aaKnown RBP18.96■□□□□ 0.63
VRK3-207ENST00000594092 CNTNAP4Q9C0A0 1308 aa18.96■□□□□ 0.63
VRK3-207ENST00000594092 TCIRG1Q13488 830 aa18.95■□□□□ 0.62
VRK3-207ENST00000594092 DZIP3Q86Y13 1208 aaKnown RBP18.95■□□□□ 0.62
VRK3-207ENST00000594092 DCTPP1Q9H773 170 aa18.95■□□□□ 0.62
VRK3-207ENST00000594092 HDAC5Q9UQL6 1122 aa18.95■□□□□ 0.62
VRK3-207ENST00000594092 PNMA6EA0A0J9YXQ4 647 aa18.95■□□□□ 0.62
VRK3-207ENST00000594092 HLFQ16534 295 aa18.95■□□□□ 0.62
VRK3-207ENST00000594092 GIGYF2Q6Y7W6 1299 aaKnown RBP18.95■□□□□ 0.62
VRK3-207ENST00000594092 ISCA1Q9BUE6 129 aa18.95■□□□□ 0.62
VRK3-207ENST00000594092 TBC1D2BQ9UPU7 963 aa18.95■□□□□ 0.62
VRK3-207ENST00000594092 ERVV-1B6SEH8 477 aa18.94■□□□□ 0.62
VRK3-207ENST00000594092 CCDC191Q8NCU4 936 aa18.94■□□□□ 0.62
VRK3-207ENST00000594092 SUCLG2Q96I99 432 aa18.94■□□□□ 0.62
VRK3-207ENST00000594092 CWC25Q9NXE8 425 aaPredicted RBP18.94■□□□□ 0.62
VRK3-207ENST00000594092 NUCB1Q02818 461 aa18.93■□□□□ 0.62
VRK3-207ENST00000594092 RC3H1Q5TC82 1133 aaKnown RBP18.93■□□□□ 0.62
VRK3-207ENST00000594092 A0A087WZG4 1122 aa18.93■□□□□ 0.62
VRK3-207ENST00000594092 RGS3P49796 1198 aa18.93■□□□□ 0.62
VRK3-207ENST00000594092 TRIM28Q13263 835 aaKnown RBP18.93■□□□□ 0.62
VRK3-207ENST00000594092 KAZALD1Q96I82 304 aa18.93■□□□□ 0.62
VRK3-207ENST00000594092 COL15A1P39059 1388 aa18.92■□□□□ 0.62
VRK3-207ENST00000594092 PPP1R42Q7Z4L9 355 aa18.92■□□□□ 0.62
VRK3-207ENST00000594092 SSH3Q8TE77 659 aa18.92■□□□□ 0.62
VRK3-207ENST00000594092 TAF1LQ8IZX4 1826 aa18.92■□□□□ 0.62
VRK3-207ENST00000594092 CASP7P55210 303 aa18.91■□□□□ 0.62
VRK3-207ENST00000594092 MTX1Q13505 466 aa18.91■□□□□ 0.62
VRK3-207ENST00000594092 POLA2Q14181 598 aa18.91■□□□□ 0.62
VRK3-207ENST00000594092 HSP90AB3PQ58FF7 597 aa18.91■□□□□ 0.62
VRK3-207ENST00000594092 UBE3BQ7Z3V4 1068 aa18.91■□□□□ 0.62
VRK3-207ENST00000594092 JARID2Q92833 1246 aaPredicted RBP18.91■□□□□ 0.62
VRK3-207ENST00000594092 H7C1W4 665 aa18.9■□□□□ 0.62
VRK3-207ENST00000594092 ANKRD45Q5TZF3 282 aa18.9■□□□□ 0.62
VRK3-207ENST00000594092 LRRC4BQ9NT99 713 aa18.9■□□□□ 0.62
VRK3-207ENST00000594092 NUP98P52948 1817 aa18.9■□□□□ 0.62
VRK3-207ENST00000594092 SRGAP3O43295 1099 aa18.9■□□□□ 0.62
VRK3-207ENST00000594092 CAMTA2O94983 1202 aa18.9■□□□□ 0.62
VRK3-207ENST00000594092 CHD1LQ86WJ1 897 aa18.9■□□□□ 0.62
VRK3-207ENST00000594092 BICC1Q9H694 974 aaKnown RBP18.9■□□□□ 0.62
VRK3-207ENST00000594092 RPS6KA4O75676 772 aa18.89■□□□□ 0.61
VRK3-207ENST00000594092 ANKRD36CQ5JPF3 1778 aa18.89■□□□□ 0.61
VRK3-207ENST00000594092 PDE4AP27815 886 aa18.88■□□□□ 0.61
VRK3-207ENST00000594092 EPHA10Q5JZY3 1008 aa18.88■□□□□ 0.61
VRK3-207ENST00000594092 LNPKQ9C0E8 428 aa18.88■□□□□ 0.61
VRK3-207ENST00000594092 C4BP0C0L5 1744 aa18.88■□□□□ 0.61
VRK3-207ENST00000594092 SLC27A3Q5K4L6 730 aa18.88■□□□□ 0.61
VRK3-207ENST00000594092 GNPATO15228 680 aa18.87■□□□□ 0.61
VRK3-207ENST00000594092 GPTP24298 496 aa18.87■□□□□ 0.61
VRK3-207ENST00000594092 NLRP10Q86W26 655 aa18.87■□□□□ 0.61
VRK3-207ENST00000594092 ZNF34Q8IZ26 560 aa18.87■□□□□ 0.61
VRK3-207ENST00000594092 SMIM5Q71RC9 77 aa18.86■□□□□ 0.61
VRK3-207ENST00000594092 EXOC6BQ9Y2D4 811 aa18.86■□□□□ 0.61
VRK3-207ENST00000594092 RTL5Q5HYW3 569 aaPredicted RBP18.86■□□□□ 0.61
VRK3-207ENST00000594092 RBM19Q9Y4C8 960 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms