RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 DZIP3Q86Y13 1208 aaKnown RBP19.68■□□□□ 0.74
PNKP-202ENST00000593706 KCNQ3O43525 872 aa19.67■□□□□ 0.74
PNKP-202ENST00000593706 CAMTA2O94983 1202 aa19.67■□□□□ 0.74
PNKP-202ENST00000593706 U2AF1L5P0DN76 240 aaPredicted RBP19.67■□□□□ 0.74
PNKP-202ENST00000593706 U2AF1Q01081 240 aaKnown RBP eCLIP19.67■□□□□ 0.749e-9■■■■■ 30
PNKP-202ENST00000593706 SCN4AP35499 1836 aa19.67■□□□□ 0.74
PNKP-202ENST00000593706 PIP4K2AP48426 406 aaPredicted RBP19.66■□□□□ 0.74
PNKP-202ENST00000593706 ERFEQ4G0M1 354 aa19.65■□□□□ 0.74
PNKP-202ENST00000593706 DPY19L2Q6NUT2 758 aa19.65■□□□□ 0.74
PNKP-202ENST00000593706 MCM10Q7L590 875 aa19.65■□□□□ 0.74
PNKP-202ENST00000593706 TAOK3Q9H2K8 898 aa19.65■□□□□ 0.74
PNKP-202ENST00000593706 ZNF652Q9Y2D9 606 aa19.65■□□□□ 0.74
PNKP-202ENST00000593706 PRPF40BQ6NWY9 871 aaKnown RBP19.64■□□□□ 0.73
PNKP-202ENST00000593706 CNKSR1Q969H4 720 aa19.64■□□□□ 0.73
PNKP-202ENST00000593706 USP16Q9Y5T5 823 aa19.64■□□□□ 0.73
PNKP-202ENST00000593706 SNRPA1P09661 255 aaKnown RBP19.63■□□□□ 0.73
PNKP-202ENST00000593706 PPP2R1AP30153 589 aa19.63■□□□□ 0.73
PNKP-202ENST00000593706 STYK1Q6J9G0 422 aa19.63■□□□□ 0.73
PNKP-202ENST00000593706 NBPF5PQ86XG9 351 aaPredicted RBP19.63■□□□□ 0.73
PNKP-202ENST00000593706 JMYQ8N9B5 988 aa19.63■□□□□ 0.73
PNKP-202ENST00000593706 LTBP3Q9NS15 1303 aa19.62■□□□□ 0.73
PNKP-202ENST00000593706 PRAMEF22A3QJZ6 481 aa19.62■□□□□ 0.73
PNKP-202ENST00000593706 SRGNP10124 158 aa19.62■□□□□ 0.73
PNKP-202ENST00000593706 SOGA3Q5TF21 947 aa19.62■□□□□ 0.73
PNKP-202ENST00000593706 MASTLQ96GX5 879 aa19.62■□□□□ 0.73
PNKP-202ENST00000593706 DCTN1Q14203 1278 aa19.6■□□□□ 0.73
PNKP-202ENST00000593706 CLEC4GQ6UXB4 293 aa19.6■□□□□ 0.73
PNKP-202ENST00000593706 NEFMP07197 916 aa19.58■□□□□ 0.72
PNKP-202ENST00000593706 NIP7Q9Y221 180 aaKnown RBP eCLIP19.58■□□□□ 0.72
PNKP-202ENST00000593706 POTECB2RU33 542 aa19.57■□□□□ 0.72
PNKP-202ENST00000593706 HTATSF1O43719 755 aaKnown RBP19.57■□□□□ 0.72
PNKP-202ENST00000593706 FAM177BA6PVY3 158 aa19.56■□□□□ 0.72
PNKP-202ENST00000593706 NPR1P16066 1061 aa19.56■□□□□ 0.72
PNKP-202ENST00000593706 CCDC93Q567U6 631 aa19.56■□□□□ 0.72
PNKP-202ENST00000593706 ANKRD36CQ5JPF3 1778 aa19.55■□□□□ 0.72
PNKP-202ENST00000593706 NBPF26B4DH59 902 aa19.55■□□□□ 0.72
PNKP-202ENST00000593706 DDNO94850 711 aaPredicted RBP19.55■□□□□ 0.72
PNKP-202ENST00000593706 TAF7Q15545 349 aaPredicted RBP19.55■□□□□ 0.72
PNKP-202ENST00000593706 NBPF10Q6P3W6 841 aaKnown RBP19.55■□□□□ 0.72
PNKP-202ENST00000593706 TPTE2Q6XPS3 522 aa19.55■□□□□ 0.72
PNKP-202ENST00000593706 NBPF15Q8N660 670 aa19.55■□□□□ 0.72
PNKP-202ENST00000593706 RGL2O15211 777 aa19.54■□□□□ 0.72
PNKP-202ENST00000593706 GTF2E1P29083 439 aaPredicted RBP19.53■□□□□ 0.72
PNKP-202ENST00000593706 COL13A1Q5TAT6 717 aaPredicted RBP19.53■□□□□ 0.72
PNKP-202ENST00000593706 CHADLQ6NUI6 762 aa19.53■□□□□ 0.72
PNKP-202ENST00000593706 MIS18AQ9NYP9 233 aa19.53■□□□□ 0.72
PNKP-202ENST00000593706 IQCA1LA6NCM1 817 aa19.52■□□□□ 0.72
PNKP-202ENST00000593706 FKBP4Q02790 459 aaKnown RBP eCLIP19.51■□□□□ 0.71
PNKP-202ENST00000593706 NGEFQ8N5V2 710 aa19.51■□□□□ 0.71
PNKP-202ENST00000593706 LAMB2P55268 1798 aa19.5■□□□□ 0.71
PNKP-202ENST00000593706 ADAMTSL1Q8N6G6 1762 aa19.5■□□□□ 0.71
PNKP-202ENST00000593706 POTEIP0CG38 1075 aa19.5■□□□□ 0.71
PNKP-202ENST00000593706 POTEJP0CG39 1038 aa19.5■□□□□ 0.71
PNKP-202ENST00000593706 HSPA1AP0DMV8 641 aaKnown RBP19.5■□□□□ 0.71
PNKP-202ENST00000593706 HSPA1BP0DMV9 641 aaKnown RBP19.5■□□□□ 0.71
PNKP-202ENST00000593706 HLFQ16534 295 aa19.5■□□□□ 0.71
PNKP-202ENST00000593706 PNISRQ8TF01 805 aaKnown RBP19.5■□□□□ 0.71
PNKP-202ENST00000593706 C7orf43Q8WVR3 580 aa19.5■□□□□ 0.71
PNKP-202ENST00000593706 ZNF277Q9NRM2 450 aaPredicted RBP19.5■□□□□ 0.71
PNKP-202ENST00000593706 KLRG2A4D1S0 409 aaPredicted RBP19.49■□□□□ 0.71
PNKP-202ENST00000593706 KIF6Q6ZMV9 814 aa19.49■□□□□ 0.71
PNKP-202ENST00000593706 RTKN2Q8IZC4 609 aa19.49■□□□□ 0.71
PNKP-202ENST00000593706 TNS4Q8IZW8 715 aa19.49■□□□□ 0.71
PNKP-202ENST00000593706 NYXQ9GZU5 481 aa19.49■□□□□ 0.71
PNKP-202ENST00000593706 MAPK8IP3Q9UPT6 1336 aa19.49■□□□□ 0.71
PNKP-202ENST00000593706 ABCC12Q96J65 1359 aa19.48■□□□□ 0.71
PNKP-202ENST00000593706 ALDH1B1P30837 517 aa19.48■□□□□ 0.71
PNKP-202ENST00000593706 OLFM4Q6UX06 510 aa19.48■□□□□ 0.71
PNKP-202ENST00000593706 CREBZFQ9NS37 354 aa19.48■□□□□ 0.71
PNKP-202ENST00000593706 ZNF541Q9H0D2 1346 aa19.48■□□□□ 0.71
PNKP-202ENST00000593706 LDHDQ86WU2 507 aa19.47■□□□□ 0.71
PNKP-202ENST00000593706 L3MBTL3Q96JM7 780 aaPredicted RBP19.47■□□□□ 0.71
PNKP-202ENST00000593706 RRP7AQ9Y3A4 280 aaKnown RBP19.47■□□□□ 0.71
PNKP-202ENST00000593706 TRPM7Q96QT4 1865 aa19.46■□□□□ 0.71
PNKP-202ENST00000593706 CAPN15O75808 1086 aa19.46■□□□□ 0.71
PNKP-202ENST00000593706 MYL6BP14649 208 aa19.46■□□□□ 0.71
PNKP-202ENST00000593706 EAPPQ56P03 285 aaPredicted RBP19.46■□□□□ 0.71
PNKP-202ENST00000593706 NUTM1Q86Y26 1132 aa19.46■□□□□ 0.71
PNKP-202ENST00000593706 TAF1DQ9H5J8 278 aaPredicted RBP19.46■□□□□ 0.71
PNKP-202ENST00000593706 MKRN1Q9UHC7 482 aaKnown RBP19.46■□□□□ 0.71
PNKP-202ENST00000593706 MAP3K15Q6ZN16 1313 aa19.46■□□□□ 0.71
PNKP-202ENST00000593706 RIC1Q4ADV7 1423 aa19.45■□□□□ 0.7
PNKP-202ENST00000593706 ERVV-1B6SEH8 477 aa19.45■□□□□ 0.7
PNKP-202ENST00000593706 IARSP41252 1262 aaKnown RBP19.45■□□□□ 0.7
PNKP-202ENST00000593706 NFE2L2Q16236 605 aa19.45■□□□□ 0.7
PNKP-202ENST00000593706 RPGRQ92834 1020 aaKnown RBP19.45■□□□□ 0.7
PNKP-202ENST00000593706 THUMPD2Q9BTF0 503 aaKnown RBP19.45■□□□□ 0.7
PNKP-202ENST00000593706 IBTKQ9P2D0 1353 aaPredicted RBP19.44■□□□□ 0.7
PNKP-202ENST00000593706 GPTP24298 496 aa19.44■□□□□ 0.7
PNKP-202ENST00000593706 EIF4A1P60842 406 aaKnown RBP19.44■□□□□ 0.7
PNKP-202ENST00000593706 PNNQ9H307 717 aaKnown RBP19.44■□□□□ 0.7
PNKP-202ENST00000593706 ZBTB3Q9H5J0 574 aa19.44■□□□□ 0.7
PNKP-202ENST00000593706 HACL1Q9UJ83 578 aa19.44■□□□□ 0.7
PNKP-202ENST00000593706 TTLL7Q6ZT98 887 aa19.43■□□□□ 0.7
PNKP-202ENST00000593706 SYNE4Q8N205 404 aa19.43■□□□□ 0.7
PNKP-202ENST00000593706 PLEKHF1Q96S99 279 aa19.43■□□□□ 0.7
PNKP-202ENST00000593706 CLEC11AQ9Y240 323 aa19.43■□□□□ 0.7
PNKP-202ENST00000593706 RNF123Q5XPI4 1314 aa19.43■□□□□ 0.7
PNKP-202ENST00000593706 SNED1Q8TER0 1413 aa19.42■□□□□ 0.7
PNKP-202ENST00000593706 CRY2Q49AN0 593 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms