RNA–Protein interactions for RNA: ENST00000593639.5

SRRM1-221, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-221ENST00000593639 CCDC93Q567U6 631 aa12.51□□□□□ -0.41
SRRM1-221ENST00000593639 MAP1SQ66K74 1059 aaPredicted RBP12.51□□□□□ -0.41
SRRM1-221ENST00000593639 ZNF790Q6PG37 636 aa12.51□□□□□ -0.41
SRRM1-221ENST00000593639 OLFM4Q6UX06 510 aa12.51□□□□□ -0.41
SRRM1-221ENST00000593639 CNTROBQ8N137 903 aa12.51□□□□□ -0.41
SRRM1-221ENST00000593639 HACL1Q9UJ83 578 aa12.51□□□□□ -0.41
SRRM1-221ENST00000593639 CLEC11AQ9Y240 323 aa12.51□□□□□ -0.41
SRRM1-221ENST00000593639 ANKRD31Q8N7Z5 1873 aa12.51□□□□□ -0.41
SRRM1-221ENST00000593639 FKBP4Q02790 459 aaKnown RBP eCLIP12.5□□□□□ -0.41
SRRM1-221ENST00000593639 DEFB115Q30KQ5 88 aa12.5□□□□□ -0.41
SRRM1-221ENST00000593639 AMER1Q5JTC6 1135 aaPredicted RBP12.5□□□□□ -0.41
SRRM1-221ENST00000593639 IL17REQ8NFR9 667 aa12.5□□□□□ -0.41
SRRM1-221ENST00000593639 TEX13AQ9BXU3 409 aaPredicted RBP12.5□□□□□ -0.41
SRRM1-221ENST00000593639 RNF123Q5XPI4 1314 aa12.5□□□□□ -0.41
SRRM1-221ENST00000593639 FER1L6Q2WGJ9 1857 aa12.5□□□□□ -0.41
SRRM1-221ENST00000593639 WDR33Q9C0J8 1336 aaKnown RBP12.49□□□□□ -0.41
SRRM1-221ENST00000593639 HSPA5P11021 654 aaKnown RBP12.49□□□□□ -0.41
SRRM1-221ENST00000593639 MAP2K1Q02750 393 aaPredicted RBP12.49□□□□□ -0.41
SRRM1-221ENST00000593639 KNSTRNQ9Y448 316 aa12.49□□□□□ -0.41
SRRM1-221ENST00000593639 CCDC88AQ3V6T2 1871 aa12.48□□□□□ -0.41
SRRM1-221ENST00000593639 NPR1P16066 1061 aa12.48□□□□□ -0.41
SRRM1-221ENST00000593639 PNMA8AQ86V59 439 aaPredicted RBP12.48□□□□□ -0.41
SRRM1-221ENST00000593639 DZIP3Q86Y13 1208 aaKnown RBP12.48□□□□□ -0.41
SRRM1-221ENST00000593639 ABT1Q9ULW3 272 aaKnown RBP12.48□□□□□ -0.41
SRRM1-221ENST00000593639 TIMELESSQ9UNS1 1208 aa12.48□□□□□ -0.41
SRRM1-221ENST00000593639 SLX4Q8IY92 1834 aa12.48□□□□□ -0.41
SRRM1-221ENST00000593639 SCN7AQ01118 1682 aa12.48□□□□□ -0.41
SRRM1-221ENST00000593639 KLRG2A4D1S0 409 aaPredicted RBP12.47□□□□□ -0.41
SRRM1-221ENST00000593639 FZD9O00144 591 aa12.47□□□□□ -0.41
SRRM1-221ENST00000593639 KCNQ3O43525 872 aa12.47□□□□□ -0.41
SRRM1-221ENST00000593639 PIP4K2AP48426 406 aaPredicted RBP12.47□□□□□ -0.41
SRRM1-221ENST00000593639 EIF4G2P78344 907 aaKnown RBP eCLIP12.47□□□□□ -0.41
SRRM1-221ENST00000593639 TEFQ10587 303 aa12.47□□□□□ -0.41
SRRM1-221ENST00000593639 NBPF5PQ86XG9 351 aaPredicted RBP12.47□□□□□ -0.41
SRRM1-221ENST00000593639 PIAS4Q8N2W9 510 aaPredicted RBP12.47□□□□□ -0.41
SRRM1-221ENST00000593639 FMNL2Q96PY5 1086 aa12.47□□□□□ -0.41
SRRM1-221ENST00000593639 UBR2Q8IWV8 1755 aa12.46□□□□□ -0.41
SRRM1-221ENST00000593639 CCDC85CA6NKD9 419 aa12.46□□□□□ -0.41
SRRM1-221ENST00000593639 DIAPH1O60610 1272 aaKnown RBP12.46□□□□□ -0.41
SRRM1-221ENST00000593639 IARSP41252 1262 aaKnown RBP12.46□□□□□ -0.41
SRRM1-221ENST00000593639 FMR1Q06787 632 aaKnown RBP eCLIP12.46□□□□□ -0.41
SRRM1-221ENST00000593639 NPM2Q86SE8 214 aaKnown RBP12.46□□□□□ -0.41
SRRM1-221ENST00000593639 DDX21Q9NR30 783 aaKnown RBP eCLIP12.46□□□□□ -0.41
SRRM1-221ENST00000593639 DICER1Q9UPY3 1922 aaKnown RBP12.46□□□□□ -0.42
SRRM1-221ENST00000593639 GNAT3A8MTJ3 354 aa12.45□□□□□ -0.42
SRRM1-221ENST00000593639 RGS19P49795 217 aa12.45□□□□□ -0.42
SRRM1-221ENST00000593639 MLLT1Q03111 559 aaPredicted RBP12.45□□□□□ -0.42
SRRM1-221ENST00000593639 RTKN2Q8IZC4 609 aa12.45□□□□□ -0.42
SRRM1-221ENST00000593639 GPC2Q8N158 579 aa12.45□□□□□ -0.42
SRRM1-221ENST00000593639 SYNE4Q8N205 404 aa12.45□□□□□ -0.42
SRRM1-221ENST00000593639 USP16Q9Y5T5 823 aa12.45□□□□□ -0.42
SRRM1-221ENST00000593639 ADAMTSL1Q8N6G6 1762 aa12.45□□□□□ -0.42
SRRM1-221ENST00000593639 PRAMEF22A3QJZ6 481 aa12.44□□□□□ -0.42
SRRM1-221ENST00000593639 CYP4F22Q6NT55 531 aa12.44□□□□□ -0.42
SRRM1-221ENST00000593639 CLEC4GQ6UXB4 293 aa12.44□□□□□ -0.42
SRRM1-221ENST00000593639 GAS2L2Q8NHY3 880 aa12.44□□□□□ -0.42
SRRM1-221ENST00000593639 CAPNS2Q96L46 248 aa12.44□□□□□ -0.42
SRRM1-221ENST00000593639 TPTE2Q6XPS3 522 aa12.43□□□□□ -0.42
SRRM1-221ENST00000593639 PAXIP1Q6ZW49 1069 aaPredicted RBP12.43□□□□□ -0.42
SRRM1-221ENST00000593639 GPR101Q96P66 508 aaPredicted RBP12.43□□□□□ -0.42
SRRM1-221ENST00000593639 TSKSQ9UJT2 592 aa12.43□□□□□ -0.42
SRRM1-221ENST00000593639 NIP7Q9Y221 180 aaKnown RBP eCLIP12.43□□□□□ -0.42
SRRM1-221ENST00000593639 GJA3Q9Y6H8 435 aa12.43□□□□□ -0.42
SRRM1-221ENST00000593639 SCN4AP35499 1836 aa12.43□□□□□ -0.42
SRRM1-221ENST00000593639 SNED1Q8TER0 1413 aa12.43□□□□□ -0.42
SRRM1-221ENST00000593639 CEMIPQ8WUJ3 1361 aa12.43□□□□□ -0.42
SRRM1-221ENST00000593639 FAM177BA6PVY3 158 aa12.42□□□□□ -0.42
SRRM1-221ENST00000593639 BTBD11A6QL63 1104 aa12.42□□□□□ -0.42
SRRM1-221ENST00000593639 TRAF5O00463 557 aa12.42□□□□□ -0.42
SRRM1-221ENST00000593639 SCNN1DP51172 638 aa12.42□□□□□ -0.42
SRRM1-221ENST00000593639 GRM1Q13255 1194 aa12.42□□□□□ -0.42
SRRM1-221ENST00000593639 CST9Q5W186 159 aa12.42□□□□□ -0.42
SRRM1-221ENST00000593639 ZNF652Q9Y2D9 606 aa12.42□□□□□ -0.42
SRRM1-221ENST00000593639 VIRMAQ69YN4 1812 aaKnown RBP12.41□□□□□ -0.42
SRRM1-221ENST00000593639 NBPF26B4DH59 902 aa12.41□□□□□ -0.42
SRRM1-221ENST00000593639 U2SURPO15042 1029 aaKnown RBP12.41□□□□□ -0.42
SRRM1-221ENST00000593639 EPS15P42566 896 aa12.41□□□□□ -0.42
SRRM1-221ENST00000593639 ECE1P42892 770 aa12.41□□□□□ -0.42
SRRM1-221ENST00000593639 NBPF10Q6P3W6 841 aaKnown RBP12.41□□□□□ -0.42
SRRM1-221ENST00000593639 NBPF15Q8N660 670 aa12.41□□□□□ -0.42
SRRM1-221ENST00000593639 JDP2Q8WYK2 163 aa12.41□□□□□ -0.42
SRRM1-221ENST00000593639 PSMD1Q99460 953 aa12.41□□□□□ -0.42
SRRM1-221ENST00000593639 BEGAINQ9BUH8 593 aa12.41□□□□□ -0.42
SRRM1-221ENST00000593639 COL4A5P29400 1685 aa12.41□□□□□ -0.42
SRRM1-221ENST00000593639 AOC2O75106 756 aa12.4□□□□□ -0.42
SRRM1-221ENST00000593639 LMOD1P29536 600 aaPredicted RBP12.4□□□□□ -0.42
SRRM1-221ENST00000593639 ALDH1B1P30837 517 aa12.4□□□□□ -0.42
SRRM1-221ENST00000593639 EIF6P56537 245 aaKnown RBP12.4□□□□□ -0.42
SRRM1-221ENST00000593639 HLFQ16534 295 aa12.4□□□□□ -0.42
SRRM1-221ENST00000593639 CC2D1BQ5T0F9 858 aaKnown RBP12.4□□□□□ -0.42
SRRM1-221ENST00000593639 SLC51AQ86UW1 340 aa12.4□□□□□ -0.42
SRRM1-221ENST00000593639 PCDH10Q9P2E7 1040 aa12.4□□□□□ -0.42
SRRM1-221ENST00000593639 TLL2Q9Y6L7 1015 aa12.4□□□□□ -0.42
SRRM1-221ENST00000593639 COL3A1P02461 1466 aaPredicted RBP12.4□□□□□ -0.43
SRRM1-221ENST00000593639 ARFGEF2Q9Y6D5 1785 aa12.39□□□□□ -0.43
SRRM1-221ENST00000593639 RGL2O15211 777 aa12.39□□□□□ -0.43
SRRM1-221ENST00000593639 PER1O15534 1290 aaPredicted RBP12.39□□□□□ -0.43
SRRM1-221ENST00000593639 CRY2Q49AN0 593 aa12.39□□□□□ -0.43
SRRM1-221ENST00000593639 PHACTR3Q96KR7 559 aa12.39□□□□□ -0.43
SRRM1-221ENST00000593639 ABCC12Q96J65 1359 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms