RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 NBPF10Q6P3W6 841 aaKnown RBP27.16■■□□□ 1.94
TRIM47-207ENST00000593089 NBPF15Q8N660 670 aa27.16■■□□□ 1.94
TRIM47-207ENST00000593089 ZNF652Q9Y2D9 606 aa27.15■■□□□ 1.94
TRIM47-207ENST00000593089 LAMB4A4D0S4 1761 aa27.14■■□□□ 1.94
TRIM47-207ENST00000593089 CLEC4GQ6UXB4 293 aa27.14■■□□□ 1.94
TRIM47-207ENST00000593089 KDM3BQ7LBC6 1761 aa27.13■■□□□ 1.93
TRIM47-207ENST00000593089 NBPF5PQ86XG9 351 aaPredicted RBP27.13■■□□□ 1.93
TRIM47-207ENST00000593089 PLEKHF1Q96S99 279 aa27.13■■□□□ 1.93
TRIM47-207ENST00000593089 FER1L6Q2WGJ9 1857 aa27.13■■□□□ 1.93
TRIM47-207ENST00000593089 SLX4Q8IY92 1834 aa27.12■■□□□ 1.93
TRIM47-207ENST00000593089 WDR90Q96KV7 1748 aa27.12■■□□□ 1.93
TRIM47-207ENST00000593089 GLTPD2A6NH11 291 aa27.11■■□□□ 1.93
TRIM47-207ENST00000593089 SRGNP10124 158 aa27.11■■□□□ 1.93
TRIM47-207ENST00000593089 FSTL1Q12841 308 aa27.11■■□□□ 1.93
TRIM47-207ENST00000593089 STYK1Q6J9G0 422 aa27.11■■□□□ 1.93
TRIM47-207ENST00000593089 CNKSR1Q969H4 720 aa27.11■■□□□ 1.93
TRIM47-207ENST00000593089 ARFGEF2Q9Y6D5 1785 aa27.1■■□□□ 1.93
TRIM47-207ENST00000593089 NFE2L2Q16236 605 aa27.1■■□□□ 1.93
TRIM47-207ENST00000593089 PNISRQ8TF01 805 aaKnown RBP27.1■■□□□ 1.93
TRIM47-207ENST00000593089 MASTLQ96GX5 879 aa27.1■■□□□ 1.93
TRIM47-207ENST00000593089 NIP7Q9Y221 180 aaKnown RBP eCLIP27.1■■□□□ 1.93
TRIM47-207ENST00000593089 PRPF40BQ6NWY9 871 aaKnown RBP27.09■■□□□ 1.93
TRIM47-207ENST00000593089 THUMPD2Q9BTF0 503 aaKnown RBP27.09■■□□□ 1.93
TRIM47-207ENST00000593089 MAPK8IP3Q9UPT6 1336 aa27.09■■□□□ 1.93
TRIM47-207ENST00000593089 DICER1Q9UPY3 1922 aaKnown RBP27.08■■□□□ 1.93
TRIM47-207ENST00000593089 FAM177BA6PVY3 158 aa27.08■■□□□ 1.93
TRIM47-207ENST00000593089 HLFQ16534 295 aa27.07■■□□□ 1.92
TRIM47-207ENST00000593089 NGEFQ8N5V2 710 aa27.07■■□□□ 1.92
TRIM47-207ENST00000593089 PNNQ9H307 717 aaKnown RBP27.07■■□□□ 1.92
TRIM47-207ENST00000593089 VEGFAP15692 232 aaPredicted RBP27.06■■□□□ 1.92
TRIM47-207ENST00000593089 HTRA3P83110 453 aa27.06■■□□□ 1.92
TRIM47-207ENST00000593089 ERFEQ4G0M1 354 aa27.06■■□□□ 1.92
TRIM47-207ENST00000593089 TPTE2Q6XPS3 522 aa27.06■■□□□ 1.92
TRIM47-207ENST00000593089 DNAJC5GQ8N7S2 189 aa27.06■■□□□ 1.92
TRIM47-207ENST00000593089 SMC1BQ8NDV3 1235 aa27.06■■□□□ 1.92
TRIM47-207ENST00000593089 TAOK3Q9H2K8 898 aa27.06■■□□□ 1.92
TRIM47-207ENST00000593089 RGL2O15211 777 aa27.05■■□□□ 1.92
TRIM47-207ENST00000593089 EIF4A1P60842 406 aaKnown RBP27.05■■□□□ 1.92
TRIM47-207ENST00000593089 DPY19L2Q6NUT2 758 aa27.04■■□□□ 1.92
TRIM47-207ENST00000593089 SOGA3Q5TF21 947 aa27.03■■□□□ 1.92
TRIM47-207ENST00000593089 LTBP3Q9NS15 1303 aa27.03■■□□□ 1.92
TRIM47-207ENST00000593089 RRP7AQ9Y3A4 280 aaKnown RBP27.03■■□□□ 1.92
TRIM47-207ENST00000593089 NPR1P16066 1061 aa27.02■■□□□ 1.92
TRIM47-207ENST00000593089 MYL6BP14649 208 aa27.01■■□□□ 1.91
TRIM47-207ENST00000593089 GTF2E1P29083 439 aaPredicted RBP27.01■■□□□ 1.91
TRIM47-207ENST00000593089 NUP98P52948 1817 aa27.01■■□□□ 1.91
TRIM47-207ENST00000593089 KLRG2A4D1S0 409 aaPredicted RBP26.99■■□□□ 1.91
TRIM47-207ENST00000593089 POTECB2RU33 542 aa26.99■■□□□ 1.91
TRIM47-207ENST00000593089 RALBP1Q15311 655 aa26.99■■□□□ 1.91
TRIM47-207ENST00000593089 TTLL7Q6ZT98 887 aa26.99■■□□□ 1.91
TRIM47-207ENST00000593089 MAP3K15Q6ZN16 1313 aa26.98■■□□□ 1.91
TRIM47-207ENST00000593089 CCDC93Q567U6 631 aa26.98■■□□□ 1.91
TRIM47-207ENST00000593089 KIF6Q6ZMV9 814 aa26.98■■□□□ 1.91
TRIM47-207ENST00000593089 C7orf43Q8WVR3 580 aa26.98■■□□□ 1.91
TRIM47-207ENST00000593089 ERVV-1B6SEH8 477 aa26.97■■□□□ 1.91
TRIM47-207ENST00000593089 RIPK4P57078 832 aa26.97■■□□□ 1.91
TRIM47-207ENST00000593089 IFFO2Q5TF58 517 aa26.97■■□□□ 1.91
TRIM47-207ENST00000593089 TSPYL4Q9UJ04 414 aa26.97■■□□□ 1.91
TRIM47-207ENST00000593089 KLRG1Q96E93 195 aa26.96■■□□□ 1.91
TRIM47-207ENST00000593089 ZBTB3Q9H5J0 574 aa26.96■■□□□ 1.91
TRIM47-207ENST00000593089 OLFM4Q6UX06 510 aa26.95■■□□□ 1.9
TRIM47-207ENST00000593089 NUTM1Q86Y26 1132 aa26.95■■□□□ 1.9
TRIM47-207ENST00000593089 NYXQ9GZU5 481 aa26.95■■□□□ 1.9
TRIM47-207ENST00000593089 ABCC12Q96J65 1359 aa26.95■■□□□ 1.9
TRIM47-207ENST00000593089 DDNO94850 711 aaPredicted RBP26.94■■□□□ 1.9
TRIM47-207ENST00000593089 GPTP24298 496 aa26.94■■□□□ 1.9
TRIM47-207ENST00000593089 DDX10Q13206 875 aaKnown RBP26.94■■□□□ 1.9
TRIM47-207ENST00000593089 ALDH1B1P30837 517 aa26.92■■□□□ 1.9
TRIM47-207ENST00000593089 FKBP4Q02790 459 aaKnown RBP eCLIP26.92■■□□□ 1.9
TRIM47-207ENST00000593089 EIF2S2P20042 333 aaKnown RBP26.91■■□□□ 1.9
TRIM47-207ENST00000593089 TMPOP42166 694 aaKnown RBP26.91■■□□□ 1.9
TRIM47-207ENST00000593089 ZNF277Q9NRM2 450 aaPredicted RBP26.91■■□□□ 1.9
TRIM47-207ENST00000593089 ERBB4Q15303 1308 aa26.9■■□□□ 1.9
TRIM47-207ENST00000593089 UBN2Q6ZU65 1347 aa26.9■■□□□ 1.9
TRIM47-207ENST00000593089 MYBBP1AQ9BQG0 1328 aaKnown RBP26.9■■□□□ 1.9
TRIM47-207ENST00000593089 SUSD4Q5VX71 490 aa26.89■■□□□ 1.9
TRIM47-207ENST00000593089 RTKN2Q8IZC4 609 aa26.89■■□□□ 1.9
TRIM47-207ENST00000593089 LMOD3Q0VAK6 560 aa26.88■■□□□ 1.89
TRIM47-207ENST00000593089 CRY2Q49AN0 593 aa26.88■■□□□ 1.89
TRIM47-207ENST00000593089 CCDC146Q8IYE0 955 aa26.88■■□□□ 1.89
TRIM47-207ENST00000593089 IBTKQ9P2D0 1353 aaPredicted RBP26.87■■□□□ 1.89
TRIM47-207ENST00000593089 NEUROD2Q15784 382 aa26.87■■□□□ 1.89
TRIM47-207ENST00000593089 GIGYF2Q6Y7W6 1299 aaKnown RBP26.87■■□□□ 1.89
TRIM47-207ENST00000593089 ZNF34Q8IZ26 560 aa26.87■■□□□ 1.89
TRIM47-207ENST00000593089 JMYQ8N9B5 988 aa26.87■■□□□ 1.89
TRIM47-207ENST00000593089 PDIA6Q15084 440 aa26.86■■□□□ 1.89
TRIM47-207ENST00000593089 RPGRQ92834 1020 aaKnown RBP26.86■■□□□ 1.89
TRIM47-207ENST00000593089 BABAM1Q9NWV8 329 aa26.86■■□□□ 1.89
TRIM47-207ENST00000593089 ANXA1P04083 346 aa26.85■■□□□ 1.89
TRIM47-207ENST00000593089 POTEIP0CG38 1075 aa26.85■■□□□ 1.89
TRIM47-207ENST00000593089 POTEJP0CG39 1038 aa26.85■■□□□ 1.89
TRIM47-207ENST00000593089 SYNE4Q8N205 404 aa26.85■■□□□ 1.89
TRIM47-207ENST00000593089 ZNF541Q9H0D2 1346 aa26.85■■□□□ 1.89
TRIM47-207ENST00000593089 RIC1Q4ADV7 1423 aa26.84■■□□□ 1.89
TRIM47-207ENST00000593089 NTSR2O95665 410 aa26.84■■□□□ 1.89
TRIM47-207ENST00000593089 IARSP41252 1262 aaKnown RBP26.84■■□□□ 1.89
TRIM47-207ENST00000593089 PROSER3Q2NL68 480 aa26.84■■□□□ 1.89
TRIM47-207ENST00000593089 CHADLQ6NUI6 762 aa26.84■■□□□ 1.89
TRIM47-207ENST00000593089 LRP10Q7Z4F1 713 aa26.84■■□□□ 1.89
TRIM47-207ENST00000593089 SCN4AP35499 1836 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms