RNA–Protein interactions for RNA: ENST00000593013.5

HDAC5-212, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 1,745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-212ENST00000593013 ZNF496Q96IT1 587 aaPredicted RBP23.14■■□□□ 1.3
HDAC5-212ENST00000593013 TBC1D2Q9BYX2 928 aa23.14■■□□□ 1.3
HDAC5-212ENST00000593013 SMARCA5O60264 1052 aaPredicted RBP23.13■■□□□ 1.29
HDAC5-212ENST00000593013 RTL5Q5HYW3 569 aaPredicted RBP23.13■■□□□ 1.29
HDAC5-212ENST00000593013 OTUD7AQ8TE49 926 aaPredicted RBP23.13■■□□□ 1.29
HDAC5-212ENST00000593013 SALL3Q9BXA9 1300 aa23.13■■□□□ 1.29
HDAC5-212ENST00000593013 PNMA6EA0A0J9YXQ4 647 aa23.13■■□□□ 1.29
HDAC5-212ENST00000593013 PI4KAP2A4QPH2 592 aa23.13■■□□□ 1.29
HDAC5-212ENST00000593013 TTC5Q8N0Z6 440 aa23.13■■□□□ 1.29
HDAC5-212ENST00000593013 PI4KAP1Q8N8J0 262 aa23.13■■□□□ 1.29
HDAC5-212ENST00000593013 SSH3Q8TE77 659 aa23.13■■□□□ 1.29
HDAC5-212ENST00000593013 HYPKQ9NX55 129 aa23.13■■□□□ 1.29
HDAC5-212ENST00000593013 LAMB4A4D0S4 1761 aa23.12■■□□□ 1.29
HDAC5-212ENST00000593013 BTAF1O14981 1849 aa23.12■■□□□ 1.29
HDAC5-212ENST00000593013 POLA2Q14181 598 aa23.11■■□□□ 1.29
HDAC5-212ENST00000593013 ALDH1L1O75891 902 aa23.11■■□□□ 1.29
HDAC5-212ENST00000593013 BCL11BQ9C0K0 894 aaPredicted RBP23.11■■□□□ 1.29
HDAC5-212ENST00000593013 DDX21Q9NR30 783 aaKnown RBP eCLIP23.11■■□□□ 1.29
HDAC5-212ENST00000593013 KSR2Q6VAB6 950 aa23.1■■□□□ 1.29
HDAC5-212ENST00000593013 FMNL2Q96PY5 1086 aa23.1■■□□□ 1.29
HDAC5-212ENST00000593013 LRRCC1Q9C099 1032 aa23.1■■□□□ 1.29
HDAC5-212ENST00000593013 PROSER3Q2NL68 480 aa23.09■■□□□ 1.29
HDAC5-212ENST00000593013 EXOC6BQ9Y2D4 811 aa23.09■■□□□ 1.29
HDAC5-212ENST00000593013 PTCD1O75127 700 aaKnown RBP23.08■■□□□ 1.29
HDAC5-212ENST00000593013 ANXA1P04083 346 aa23.08■■□□□ 1.29
HDAC5-212ENST00000593013 PRAMEF22A3QJZ6 481 aa23.08■■□□□ 1.28
HDAC5-212ENST00000593013 PDE1AP54750 535 aa23.08■■□□□ 1.28
HDAC5-212ENST00000593013 PDIA6Q15084 440 aa23.08■■□□□ 1.28
HDAC5-212ENST00000593013 SNX21Q969T3 373 aa23.08■■□□□ 1.28
HDAC5-212ENST00000593013 APBB1O00213 710 aa23.07■■□□□ 1.28
HDAC5-212ENST00000593013 SDSP20132 328 aa23.07■■□□□ 1.28
HDAC5-212ENST00000593013 ANTXR1Q9H6X2 564 aa23.07■■□□□ 1.28
HDAC5-212ENST00000593013 TNS1Q9HBL0 1735 aaKnown RBP23.07■■□□□ 1.28
HDAC5-212ENST00000593013 RAB11FIP3O75154 756 aa23.06■■□□□ 1.28
HDAC5-212ENST00000593013 TRIM37O94972 964 aa23.06■■□□□ 1.28
HDAC5-212ENST00000593013 MTX1Q13505 466 aa23.06■■□□□ 1.28
HDAC5-212ENST00000593013 SLC4A9Q96Q91 983 aa23.06■■□□□ 1.28
HDAC5-212ENST00000593013 SNRPA1P09661 255 aaKnown RBP23.05■■□□□ 1.28
HDAC5-212ENST00000593013 NFKBIBQ15653 356 aa23.05■■□□□ 1.28
HDAC5-212ENST00000593013 SMARCC1Q92922 1105 aaPredicted RBP23.05■■□□□ 1.28
HDAC5-212ENST00000593013 STAP2Q9UGK3 403 aa23.05■■□□□ 1.28
HDAC5-212ENST00000593013 MAP3K2Q9Y2U5 619 aa23.05■■□□□ 1.28
HDAC5-212ENST00000593013 AOX1Q06278 1338 aa23.05■■□□□ 1.28
HDAC5-212ENST00000593013 PALLDQ8WX93 1383 aa23.05■■□□□ 1.28
HDAC5-212ENST00000593013 NBPF7P0C2Y1 421 aaPredicted RBP23.05■■□□□ 1.28
HDAC5-212ENST00000593013 PPP1R42Q7Z4L9 355 aa23.05■■□□□ 1.28
HDAC5-212ENST00000593013 VSIG10Q8N0Z9 540 aa23.05■■□□□ 1.28
HDAC5-212ENST00000593013 KIF2CQ99661 725 aa23.05■■□□□ 1.28
HDAC5-212ENST00000593013 DDX58O95786 925 aaKnown RBP23.04■■□□□ 1.28
HDAC5-212ENST00000593013 HDAC5Q9UQL6 1122 aa23.04■■□□□ 1.28
HDAC5-212ENST00000593013 UTYO14607 1347 aa23.04■■□□□ 1.28
HDAC5-212ENST00000593013 LINS1Q8NG48 757 aa23.02■■□□□ 1.28
HDAC5-212ENST00000593013 RBM42Q9BTD8 480 aaKnown RBP23.02■■□□□ 1.28
HDAC5-212ENST00000593013 LOC102724428A0A0B4J2F2 783 aa23.02■■□□□ 1.28
HDAC5-212ENST00000593013 MX1P20591 662 aa23.02■■□□□ 1.28
HDAC5-212ENST00000593013 SIK1P57059 783 aa23.02■■□□□ 1.28
HDAC5-212ENST00000593013 CASC1Q6TDU7 716 aa23.02■■□□□ 1.28
HDAC5-212ENST00000593013 USP16Q9Y5T5 823 aa23.02■■□□□ 1.28
HDAC5-212ENST00000593013 ZNF831Q5JPB2 1677 aa23.01■■□□□ 1.27
HDAC5-212ENST00000593013 LY75O60449 1722 aa23.01■■□□□ 1.27
HDAC5-212ENST00000593013 HSCBQ8IWL3 235 aa23.01■■□□□ 1.27
HDAC5-212ENST00000593013 CICQ96RK0 1608 aaPredicted RBP23.01■■□□□ 1.27
HDAC5-212ENST00000593013 TJP1Q07157 1748 aa22.99■■□□□ 1.27
HDAC5-212ENST00000593013 LRP10Q7Z4F1 713 aa22.99■■□□□ 1.27
HDAC5-212ENST00000593013 SRGAP3O43295 1099 aa22.99■■□□□ 1.27
HDAC5-212ENST00000593013 HSP90AB4PQ58FF6 505 aa22.99■■□□□ 1.27
HDAC5-212ENST00000593013 ARFGEF2Q9Y6D5 1785 aa22.98■■□□□ 1.27
HDAC5-212ENST00000593013 DNAJC10Q8IXB1 793 aa22.98■■□□□ 1.27
HDAC5-212ENST00000593013 TEX13AQ9BXU3 409 aaPredicted RBP22.98■■□□□ 1.27
HDAC5-212ENST00000593013 KIF1BPQ96EK5 621 aa22.97■■□□□ 1.27
HDAC5-212ENST00000593013 USP26Q9BXU7 913 aa22.97■■□□□ 1.27
HDAC5-212ENST00000593013 AK9Q5TCS8 1911 aa22.97■■□□□ 1.27
HDAC5-212ENST00000593013 SURF6O75683 361 aaKnown RBP22.96■■□□□ 1.27
HDAC5-212ENST00000593013 RHPN1Q8TCX5 695 aa22.96■■□□□ 1.27
HDAC5-212ENST00000593013 C9orf78Q9NZ63 289 aaPredicted RBP22.96■■□□□ 1.27
HDAC5-212ENST00000593013 ERBB4Q15303 1308 aa22.96■■□□□ 1.27
HDAC5-212ENST00000593013 GRM8O00222 908 aa22.96■■□□□ 1.27
HDAC5-212ENST00000593013 ATP6V1AP38606 617 aa22.96■■□□□ 1.27
HDAC5-212ENST00000593013 ITPK1Q13572 414 aa22.96■■□□□ 1.27
HDAC5-212ENST00000593013 SLKQ9H2G2 1235 aaPredicted RBP22.96■■□□□ 1.27
HDAC5-212ENST00000593013 UPF1Q92900 1129 aaKnown RBP eCLIP22.95■■□□□ 1.26
HDAC5-212ENST00000593013 AFDNP55196 1824 aaKnown RBP22.95■■□□□ 1.26
HDAC5-212ENST00000593013 REC8O95072 547 aa22.94■■□□□ 1.26
HDAC5-212ENST00000593013 CYP19A1P11511 503 aaPredicted RBP22.94■■□□□ 1.26
HDAC5-212ENST00000593013 CWF19L2Q2TBE0 894 aaKnown RBP22.94■■□□□ 1.26
HDAC5-212ENST00000593013 USP42Q9H9J4 1324 aaKnown RBP22.94■■□□□ 1.26
HDAC5-212ENST00000593013 RGPD3A6NKT7 1758 aaPredicted RBP22.94■■□□□ 1.26
HDAC5-212ENST00000593013 RGPD4Q7Z3J3 1758 aa22.94■■□□□ 1.26
HDAC5-212ENST00000593013 PLSCR1O15162 318 aa22.94■■□□□ 1.26
HDAC5-212ENST00000593013 IGKV5-2P06315 115 aa22.94■■□□□ 1.26
HDAC5-212ENST00000593013 XAGE3Q8WTP9 111 aa22.94■■□□□ 1.26
HDAC5-212ENST00000593013 METTL22Q9BUU2 404 aaPredicted RBP22.94■■□□□ 1.26
HDAC5-212ENST00000593013 BCL11AQ9H165 835 aa22.94■■□□□ 1.26
HDAC5-212ENST00000593013 COL5A3P25940 1745 aaPredicted RBP22.93■■□□□ 1.26
HDAC5-212ENST00000593013 ERC2O15083 957 aa22.93■■□□□ 1.26
HDAC5-212ENST00000593013 STARD3NLO95772 234 aa22.93■■□□□ 1.26
HDAC5-212ENST00000593013 SF3B2Q13435 895 aaKnown RBP22.93■■□□□ 1.26
HDAC5-212ENST00000593013 NUP188Q5SRE5 1749 aa22.92■■□□□ 1.26
HDAC5-212ENST00000593013 APBA3O96018 575 aa22.92■■□□□ 1.26
HDAC5-212ENST00000593013 A1BGP04217 495 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms