RNA–Protein interactions for RNA: ENST00000592909.1

SMCO4P1-201, Transcript of single-pass membrane protein with coiled-coil domains 4 pseudogene 1, humanhuman

BASIC

Gene SMCO4P1, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4P1-201ENST00000592909 ANKRD31Q8N7Z5 1873 aa13.78□□□□□ -0.2
SMCO4P1-201ENST00000592909 CAMTA2O94983 1202 aa13.77□□□□□ -0.21
SMCO4P1-201ENST00000592909 HMOX1P09601 288 aa13.77□□□□□ -0.21
SMCO4P1-201ENST00000592909 EPHX2P34913 555 aa13.77□□□□□ -0.21
SMCO4P1-201ENST00000592909 RGS19P49795 217 aa13.77□□□□□ -0.21
SMCO4P1-201ENST00000592909 FKBP4Q02790 459 aaKnown RBP eCLIP13.77□□□□□ -0.21
SMCO4P1-201ENST00000592909 CNTROBQ8N137 903 aa13.77□□□□□ -0.21
SMCO4P1-201ENST00000592909 WDR33Q9C0J8 1336 aaKnown RBP13.77□□□□□ -0.21
SMCO4P1-201ENST00000592909 PCDH10Q9P2E7 1040 aa13.77□□□□□ -0.21
SMCO4P1-201ENST00000592909 HEG1Q9ULI3 1381 aa13.77□□□□□ -0.21
SMCO4P1-201ENST00000592909 CLEC11AQ9Y240 323 aa13.77□□□□□ -0.21
SMCO4P1-201ENST00000592909 ZNF541Q9H0D2 1346 aa13.76□□□□□ -0.21
SMCO4P1-201ENST00000592909 KLRG2A4D1S0 409 aaPredicted RBP13.76□□□□□ -0.21
SMCO4P1-201ENST00000592909 NPHP1O15259 732 aa13.76□□□□□ -0.21
SMCO4P1-201ENST00000592909 ZNF790Q6PG37 636 aa13.76□□□□□ -0.21
SMCO4P1-201ENST00000592909 ZNF330Q9Y3S2 320 aaPredicted RBP13.76□□□□□ -0.21
SMCO4P1-201ENST00000592909 FZD9O00144 591 aa13.75□□□□□ -0.21
SMCO4P1-201ENST00000592909 A1BGP04217 495 aa13.75□□□□□ -0.21
SMCO4P1-201ENST00000592909 NPR1P16066 1061 aa13.75□□□□□ -0.21
SMCO4P1-201ENST00000592909 MAP1SQ66K74 1059 aaPredicted RBP13.75□□□□□ -0.21
SMCO4P1-201ENST00000592909 NPM2Q86SE8 214 aaKnown RBP13.75□□□□□ -0.21
SMCO4P1-201ENST00000592909 KNSTRNQ9Y448 316 aa13.75□□□□□ -0.21
SMCO4P1-201ENST00000592909 SCN4AP35499 1836 aa13.75□□□□□ -0.21
SMCO4P1-201ENST00000592909 COL11A2P13942 1736 aaPredicted RBP13.75□□□□□ -0.21
SMCO4P1-201ENST00000592909 SLX4Q8IY92 1834 aa13.74□□□□□ -0.21
SMCO4P1-201ENST00000592909 MLLT1Q03111 559 aaPredicted RBP13.74□□□□□ -0.21
SMCO4P1-201ENST00000592909 CLEC4GQ6UXB4 293 aa13.74□□□□□ -0.21
SMCO4P1-201ENST00000592909 RTKN2Q8IZC4 609 aa13.74□□□□□ -0.21
SMCO4P1-201ENST00000592909 IL17REQ8NFR9 667 aa13.74□□□□□ -0.21
SMCO4P1-201ENST00000592909 ZNF277Q9NRM2 450 aaPredicted RBP13.74□□□□□ -0.21
SMCO4P1-201ENST00000592909 TEFQ10587 303 aa13.73□□□□□ -0.21
SMCO4P1-201ENST00000592909 AMER1Q5JTC6 1135 aaPredicted RBP13.73□□□□□ -0.21
SMCO4P1-201ENST00000592909 NBPF5PQ86XG9 351 aaPredicted RBP13.73□□□□□ -0.21
SMCO4P1-201ENST00000592909 DZIP3Q86Y13 1208 aaKnown RBP13.73□□□□□ -0.21
SMCO4P1-201ENST00000592909 FMNL2Q96PY5 1086 aa13.73□□□□□ -0.21
SMCO4P1-201ENST00000592909 ABT1Q9ULW3 272 aaKnown RBP13.73□□□□□ -0.21
SMCO4P1-201ENST00000592909 VIRMAQ69YN4 1812 aaKnown RBP13.73□□□□□ -0.21
SMCO4P1-201ENST00000592909 UBR2Q8IWV8 1755 aa13.73□□□□□ -0.21
SMCO4P1-201ENST00000592909 RNF123Q5XPI4 1314 aa13.72□□□□□ -0.21
SMCO4P1-201ENST00000592909 IARSP41252 1262 aaKnown RBP13.72□□□□□ -0.21
SMCO4P1-201ENST00000592909 EIF4G2P78344 907 aaKnown RBP eCLIP13.72□□□□□ -0.21
SMCO4P1-201ENST00000592909 GPC2Q8N158 579 aa13.72□□□□□ -0.21
SMCO4P1-201ENST00000592909 DDX21Q9NR30 783 aaKnown RBP eCLIP13.72□□□□□ -0.21
SMCO4P1-201ENST00000592909 ADAMTSL1Q8N6G6 1762 aa13.72□□□□□ -0.21
SMCO4P1-201ENST00000592909 SCN7AQ01118 1682 aa13.72□□□□□ -0.21
SMCO4P1-201ENST00000592909 CCDC85CA6NKD9 419 aa13.71□□□□□ -0.21
SMCO4P1-201ENST00000592909 DIAPH1O60610 1272 aaKnown RBP13.71□□□□□ -0.21
SMCO4P1-201ENST00000592909 ECE1P42892 770 aa13.71□□□□□ -0.21
SMCO4P1-201ENST00000592909 TPTE2Q6XPS3 522 aa13.71□□□□□ -0.21
SMCO4P1-201ENST00000592909 SYNE4Q8N205 404 aa13.71□□□□□ -0.21
SMCO4P1-201ENST00000592909 GNAT3A8MTJ3 354 aa13.7□□□□□ -0.22
SMCO4P1-201ENST00000592909 RGL2O15211 777 aa13.7□□□□□ -0.22
SMCO4P1-201ENST00000592909 HSPA5P11021 654 aaKnown RBP13.7□□□□□ -0.22
SMCO4P1-201ENST00000592909 OLFM4Q6UX06 510 aa13.7□□□□□ -0.22
SMCO4P1-201ENST00000592909 GAS2L2Q8NHY3 880 aa13.7□□□□□ -0.22
SMCO4P1-201ENST00000592909 CAPNS2Q96L46 248 aa13.7□□□□□ -0.22
SMCO4P1-201ENST00000592909 BEGAINQ9BUH8 593 aa13.7□□□□□ -0.22
SMCO4P1-201ENST00000592909 ZNF652Q9Y2D9 606 aa13.7□□□□□ -0.22
SMCO4P1-201ENST00000592909 ALDH1B1P30837 517 aa13.69□□□□□ -0.22
SMCO4P1-201ENST00000592909 GPR101Q96P66 508 aaPredicted RBP13.69□□□□□ -0.22
SMCO4P1-201ENST00000592909 PSMD1Q99460 953 aa13.69□□□□□ -0.22
SMCO4P1-201ENST00000592909 USP16Q9Y5T5 823 aa13.69□□□□□ -0.22
SMCO4P1-201ENST00000592909 ARFGEF2Q9Y6D5 1785 aa13.68□□□□□ -0.22
SMCO4P1-201ENST00000592909 JDP2Q8WYK2 163 aa13.68□□□□□ -0.22
SMCO4P1-201ENST00000592909 KCNQ3O43525 872 aa13.67□□□□□ -0.22
SMCO4P1-201ENST00000592909 MAP2K2P36507 400 aa13.67□□□□□ -0.22
SMCO4P1-201ENST00000592909 EIF6P56537 245 aaKnown RBP13.67□□□□□ -0.22
SMCO4P1-201ENST00000592909 CST9Q5W186 159 aa13.67□□□□□ -0.22
SMCO4P1-201ENST00000592909 CC2D2BQ6DHV5 1058 aa13.67□□□□□ -0.22
SMCO4P1-201ENST00000592909 CYP4F22Q6NT55 531 aa13.67□□□□□ -0.22
SMCO4P1-201ENST00000592909 NIP7Q9Y221 180 aaKnown RBP eCLIP13.67□□□□□ -0.22
SMCO4P1-201ENST00000592909 CEMIPQ8WUJ3 1361 aa13.67□□□□□ -0.22
SMCO4P1-201ENST00000592909 SNED1Q8TER0 1413 aa13.66□□□□□ -0.22
SMCO4P1-201ENST00000592909 BTBD11A6QL63 1104 aa13.66□□□□□ -0.22
SMCO4P1-201ENST00000592909 LMOD1P29536 600 aaPredicted RBP13.66□□□□□ -0.22
SMCO4P1-201ENST00000592909 FMR1Q06787 632 aaKnown RBP eCLIP13.66□□□□□ -0.22
SMCO4P1-201ENST00000592909 TLL2Q9Y6L7 1015 aa13.66□□□□□ -0.22
SMCO4P1-201ENST00000592909 CA12O43570 354 aa13.65□□□□□ -0.22
SMCO4P1-201ENST00000592909 EPS15P42566 896 aa13.65□□□□□ -0.22
SMCO4P1-201ENST00000592909 PIP4K2AP48426 406 aaPredicted RBP13.65□□□□□ -0.22
SMCO4P1-201ENST00000592909 SCNN1DP51172 638 aa13.65□□□□□ -0.22
SMCO4P1-201ENST00000592909 CRY2Q49AN0 593 aa13.65□□□□□ -0.22
SMCO4P1-201ENST00000592909 PAXIP1Q6ZW49 1069 aaPredicted RBP13.65□□□□□ -0.22
SMCO4P1-201ENST00000592909 USP50Q70EL3 339 aaPredicted RBP13.65□□□□□ -0.22
SMCO4P1-201ENST00000592909 GJA3Q9Y6H8 435 aa13.65□□□□□ -0.22
SMCO4P1-201ENST00000592909 THSD7BQ9C0I4 1608 aa13.64□□□□□ -0.23
SMCO4P1-201ENST00000592909 PRAMEF22A3QJZ6 481 aa13.64□□□□□ -0.23
SMCO4P1-201ENST00000592909 SNRPA1P09661 255 aaKnown RBP13.64□□□□□ -0.23
SMCO4P1-201ENST00000592909 GRIPAP1Q4V328 841 aa13.64□□□□□ -0.23
SMCO4P1-201ENST00000592909 NBPF26B4DH59 902 aa13.63□□□□□ -0.23
SMCO4P1-201ENST00000592909 TRAF5O00463 557 aa13.63□□□□□ -0.23
SMCO4P1-201ENST00000592909 GTF2E1P29083 439 aaPredicted RBP13.63□□□□□ -0.23
SMCO4P1-201ENST00000592909 GRM1Q13255 1194 aa13.63□□□□□ -0.23
SMCO4P1-201ENST00000592909 NBPF10Q6P3W6 841 aaKnown RBP13.63□□□□□ -0.23
SMCO4P1-201ENST00000592909 NBPF15Q8N660 670 aa13.63□□□□□ -0.23
SMCO4P1-201ENST00000592909 MCOLN1Q9GZU1 580 aa13.63□□□□□ -0.23
SMCO4P1-201ENST00000592909 CLSPNQ9HAW4 1339 aa13.63□□□□□ -0.23
SMCO4P1-201ENST00000592909 FAM177BA6PVY3 158 aa13.62□□□□□ -0.23
SMCO4P1-201ENST00000592909 U2SURPO15042 1029 aaKnown RBP13.62□□□□□ -0.23
SMCO4P1-201ENST00000592909 PER1O15534 1290 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms