RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 SGSM2O43147 1006 aa20.12■□□□□ 0.81
PRKCSH-217ENST00000592741 CABLES1Q8TDN4 633 aa20.12■□□□□ 0.81
PRKCSH-217ENST00000592741 SUCLG2Q96I99 432 aa20.12■□□□□ 0.81
PRKCSH-217ENST00000592741 PKD1L3Q7Z443 1732 aa20.12■□□□□ 0.81
PRKCSH-217ENST00000592741 HSPA4P34932 840 aa20.12■□□□□ 0.81
PRKCSH-217ENST00000592741 NEXNQ0ZGT2 675 aa20.12■□□□□ 0.81
PRKCSH-217ENST00000592741 DCAF5Q96JK2 942 aa20.12■□□□□ 0.81
PRKCSH-217ENST00000592741 IL25Q9H293 177 aa20.11■□□□□ 0.81
PRKCSH-217ENST00000592741 SPATA31A3Q5VYP0 1347 aa20.11■□□□□ 0.81
PRKCSH-217ENST00000592741 RAD50Q92878 1312 aa20.11■□□□□ 0.81
PRKCSH-217ENST00000592741 IFIT2P09913 472 aaKnown RBP20.11■□□□□ 0.81
PRKCSH-217ENST00000592741 CUL4AQ13619 759 aa20.11■□□□□ 0.81
PRKCSH-217ENST00000592741 PKP1Q13835 747 aa20.11■□□□□ 0.81
PRKCSH-217ENST00000592741 CHRNA2Q15822 529 aa20.11■□□□□ 0.81
PRKCSH-217ENST00000592741 TTC5Q8N0Z6 440 aa20.11■□□□□ 0.81
PRKCSH-217ENST00000592741 ECHDC1Q9NTX5 307 aa20.11■□□□□ 0.81
PRKCSH-217ENST00000592741 PA2G4Q9UQ80 394 aaKnown RBP20.11■□□□□ 0.81
PRKCSH-217ENST00000592741 CPDO75976 1380 aa20.1■□□□□ 0.81
PRKCSH-217ENST00000592741 MYL6BP14649 208 aa20.1■□□□□ 0.81
PRKCSH-217ENST00000592741 KLHL40Q2TBA0 621 aa20.1■□□□□ 0.81
PRKCSH-217ENST00000592741 MCTP1Q6DN14 999 aa20.1■□□□□ 0.81
PRKCSH-217ENST00000592741 BICC1Q9H694 974 aaKnown RBP20.1■□□□□ 0.81
PRKCSH-217ENST00000592741 XAGE3Q8WTP9 111 aa20.09■□□□□ 0.81
PRKCSH-217ENST00000592741 GRPEL1Q9HAV7 217 aa20.09■□□□□ 0.81
PRKCSH-217ENST00000592741 IGKV5-2P06315 115 aa20.09■□□□□ 0.81
PRKCSH-217ENST00000592741 SNRPA1P09661 255 aaKnown RBP20.09■□□□□ 0.81
PRKCSH-217ENST00000592741 KIAA1211Q6ZU35 1233 aa20.09■□□□□ 0.81
PRKCSH-217ENST00000592741 ZNF496Q96IT1 587 aaPredicted RBP20.09■□□□□ 0.81
PRKCSH-217ENST00000592741 DDX49Q9Y6V7 483 aaKnown RBP20.09■□□□□ 0.81
PRKCSH-217ENST00000592741 G3BP1Q13283 466 aaKnown RBP eCLIP20.08■□□□□ 0.811e-6■■□□□ 13.6
PRKCSH-217ENST00000592741 RUFY2Q8WXA3 655 aa20.08■□□□□ 0.81
PRKCSH-217ENST00000592741 INTS4Q96HW7 963 aaKnown RBP20.08■□□□□ 0.81
PRKCSH-217ENST00000592741 KAZALD1Q96I82 304 aa20.08■□□□□ 0.81
PRKCSH-217ENST00000592741 DIAPH3Q9NSV4 1193 aa20.08■□□□□ 0.81
PRKCSH-217ENST00000592741 NEURL1BA8MQ27 555 aa20.08■□□□□ 0.8
PRKCSH-217ENST00000592741 CYP27B1O15528 508 aa20.08■□□□□ 0.8
PRKCSH-217ENST00000592741 AACSQ86V21 672 aa20.08■□□□□ 0.8
PRKCSH-217ENST00000592741 METTL22Q9BUU2 404 aaPredicted RBP20.08■□□□□ 0.8
PRKCSH-217ENST00000592741 LSG1Q9H089 658 aaKnown RBP20.08■□□□□ 0.8
PRKCSH-217ENST00000592741 COPS6Q7L5N1 327 aa20.07■□□□□ 0.8
PRKCSH-217ENST00000592741 FMNL2Q96PY5 1086 aa20.07■□□□□ 0.8
PRKCSH-217ENST00000592741 CWC27Q6UX04 472 aaKnown RBP20.06■□□□□ 0.8
PRKCSH-217ENST00000592741 FAM43AQ8N2R8 423 aa20.06■□□□□ 0.8
PRKCSH-217ENST00000592741 UPF3BQ9BZI7 483 aaKnown RBP20.06■□□□□ 0.8
PRKCSH-217ENST00000592741 ZDHHC9Q9Y397 364 aa20.06■□□□□ 0.8
PRKCSH-217ENST00000592741 PARP4Q9UKK3 1724 aaKnown RBP20.06■□□□□ 0.8
PRKCSH-217ENST00000592741 MYD88Q99836 296 aa20.06■□□□□ 0.8
PRKCSH-217ENST00000592741 CABP4P57796 275 aa20.05■□□□□ 0.8
PRKCSH-217ENST00000592741 GCKRQ14397 625 aa20.05■□□□□ 0.8
PRKCSH-217ENST00000592741 NOL8Q76FK4 1167 aaKnown RBP20.05■□□□□ 0.8
PRKCSH-217ENST00000592741 PANK2Q9BZ23 570 aa20.05■□□□□ 0.8
PRKCSH-217ENST00000592741 EVI5LQ96CN4 794 aa20.05■□□□□ 0.8
PRKCSH-217ENST00000592741 LMBRD1Q9NUN5 540 aa20.05■□□□□ 0.8
PRKCSH-217ENST00000592741 SASH1O94885 1247 aa20.04■□□□□ 0.8
PRKCSH-217ENST00000592741 ANKRD13DQ6ZTN6 518 aa20.04■□□□□ 0.8
PRKCSH-217ENST00000592741 SNX14Q9Y5W7 946 aa20.04■□□□□ 0.8
PRKCSH-217ENST00000592741 USP16Q9Y5T5 823 aa20.03■□□□□ 0.8
PRKCSH-217ENST00000592741 LAMB4A4D0S4 1761 aa20.03■□□□□ 0.8
PRKCSH-217ENST00000592741 LRP10Q7Z4F1 713 aa20.03■□□□□ 0.8
PRKCSH-217ENST00000592741 BRD1O95696 1058 aa20.02■□□□□ 0.79
PRKCSH-217ENST00000592741 GAS2L3Q86XJ1 694 aa20.02■□□□□ 0.79
PRKCSH-217ENST00000592741 XIRP1Q702N8 1843 aaKnown RBP20.02■□□□□ 0.79
PRKCSH-217ENST00000592741 AFDNP55196 1824 aaKnown RBP20.01■□□□□ 0.79
PRKCSH-217ENST00000592741 HIP1O00291 1037 aa20.01■□□□□ 0.79
PRKCSH-217ENST00000592741 EAF2Q96CJ1 260 aaPredicted RBP20.01■□□□□ 0.79
PRKCSH-217ENST00000592741 BRINP3Q76B58 766 aa20■□□□□ 0.79
PRKCSH-217ENST00000592741 SIL1Q9H173 461 aa20■□□□□ 0.79
PRKCSH-217ENST00000592741 ARFGEF2Q9Y6D5 1785 aa20■□□□□ 0.79
PRKCSH-217ENST00000592741 NCLP19338 710 aaKnown RBP20■□□□□ 0.79
PRKCSH-217ENST00000592741 HSPA2P54652 639 aa20■□□□□ 0.79
PRKCSH-217ENST00000592741 CCDC8Q9H0W5 538 aaPredicted RBP20■□□□□ 0.79
PRKCSH-217ENST00000592741 PRPF40AO75400 957 aaKnown RBP19.99■□□□□ 0.79
PRKCSH-217ENST00000592741 GLI3P10071 1580 aa19.99■□□□□ 0.79
PRKCSH-217ENST00000592741 PCDH11XQ9BZA7 1347 aa19.99■□□□□ 0.79
PRKCSH-217ENST00000592741 PCDH11YQ9BZA8 1340 aa19.99■□□□□ 0.79
PRKCSH-217ENST00000592741 EPHA10Q5JZY3 1008 aa19.99■□□□□ 0.79
PRKCSH-217ENST00000592741 RASEFQ8IZ41 740 aa19.99■□□□□ 0.79
PRKCSH-217ENST00000592741 TTC14Q96N46 770 aa19.99■□□□□ 0.79
PRKCSH-217ENST00000592741 COL15A1P39059 1388 aa19.98■□□□□ 0.79
PRKCSH-217ENST00000592741 WDR17Q8IZU2 1322 aa19.98■□□□□ 0.79
PRKCSH-217ENST00000592741 PIP4K2AP48426 406 aaPredicted RBP19.98■□□□□ 0.79
PRKCSH-217ENST00000592741 FOXD4L5Q5VV16 416 aaPredicted RBP19.98■□□□□ 0.79
PRKCSH-217ENST00000592741 FOXD4L4Q8WXT5 416 aaPredicted RBP19.98■□□□□ 0.79
PRKCSH-217ENST00000592741 PRDM11Q9NQV5 511 aa19.98■□□□□ 0.79
PRKCSH-217ENST00000592741 CAVIN1Q6NZI2 390 aaKnown RBP19.97■□□□□ 0.79
PRKCSH-217ENST00000592741 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.97■□□□□ 0.79
PRKCSH-217ENST00000592741 ERBB4Q15303 1308 aa19.97■□□□□ 0.79
PRKCSH-217ENST00000592741 ZNF445P59923 1031 aa19.97■□□□□ 0.79
PRKCSH-217ENST00000592741 PLBD2Q8NHP8 589 aa19.97■□□□□ 0.79
PRKCSH-217ENST00000592741 COPRSQ9NQ92 184 aa19.97■□□□□ 0.79
PRKCSH-217ENST00000592741 TLR7Q9NYK1 1049 aaKnown RBP19.97■□□□□ 0.79
PRKCSH-217ENST00000592741 AK2P54819 239 aa19.96■□□□□ 0.79
PRKCSH-217ENST00000592741 PTH1RQ03431 593 aa19.96■□□□□ 0.79
PRKCSH-217ENST00000592741 TOM1L2Q6ZVM7 507 aa19.96■□□□□ 0.79
PRKCSH-217ENST00000592741 KLHDC4Q8TBB5 520 aa19.96■□□□□ 0.79
PRKCSH-217ENST00000592741 ZCRB1Q8TBF4 217 aaKnown RBP19.96■□□□□ 0.79
PRKCSH-217ENST00000592741 LIMCH1Q9UPQ0 1083 aa19.96■□□□□ 0.79
PRKCSH-217ENST00000592741 CCDC171Q6TFL3 1326 aa19.95■□□□□ 0.78
PRKCSH-217ENST00000592741 CASTP20810 708 aaKnown RBP19.95■□□□□ 0.78
PRKCSH-217ENST00000592741 RABL6Q3YEC7 729 aaPredicted RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms