RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 SETDB2Q96T68 719 aa13.46□□□□□ -0.25
VMP1-214ENST00000592106 PNNQ9H307 717 aaKnown RBP13.46□□□□□ -0.25
VMP1-214ENST00000592106 TBC1D2BQ9UPU7 963 aa13.46□□□□□ -0.25
VMP1-214ENST00000592106 TNRC6CQ9HCJ0 1690 aaKnown RBP13.46□□□□□ -0.26
VMP1-214ENST00000592106 A1BGP04217 495 aa13.45□□□□□ -0.26
VMP1-214ENST00000592106 APLP1P51693 650 aa13.45□□□□□ -0.26
VMP1-214ENST00000592106 MCM10Q7L590 875 aa13.45□□□□□ -0.26
VMP1-214ENST00000592106 CNBD1Q8NA66 436 aa13.45□□□□□ -0.26
VMP1-214ENST00000592106 BRIP1Q9BX63 1249 aa13.45□□□□□ -0.26
VMP1-214ENST00000592106 NMRK2Q9NPI5 230 aa13.45□□□□□ -0.26
VMP1-214ENST00000592106 CAMTA2O94983 1202 aa13.44□□□□□ -0.26
VMP1-214ENST00000592106 LMNB1P20700 586 aa13.44□□□□□ -0.26
VMP1-214ENST00000592106 RASSF7Q02833 373 aa13.44□□□□□ -0.26
VMP1-214ENST00000592106 RBM46Q8TBY0 533 aaKnown RBP13.44□□□□□ -0.26
VMP1-214ENST00000592106 PNISRQ8TF01 805 aaKnown RBP13.44□□□□□ -0.26
VMP1-214ENST00000592106 ZNF622Q969S3 477 aaKnown RBP eCLIP13.44□□□□□ -0.26
VMP1-214ENST00000592106 KCNQ3O43525 872 aa13.43□□□□□ -0.26
VMP1-214ENST00000592106 TAF7Q15545 349 aaPredicted RBP13.43□□□□□ -0.26
VMP1-214ENST00000592106 PRR5LQ6MZQ0 368 aa13.43□□□□□ -0.26
VMP1-214ENST00000592106 CLEC4GQ6UXB4 293 aa13.43□□□□□ -0.26
VMP1-214ENST00000592106 LAMB4A4D0S4 1761 aa13.43□□□□□ -0.26
VMP1-214ENST00000592106 MAPK8IP3Q9UPT6 1336 aa13.42□□□□□ -0.26
VMP1-214ENST00000592106 SBF1O95248 1867 aa13.42□□□□□ -0.26
VMP1-214ENST00000592106 RGL2O15211 777 aa13.42□□□□□ -0.26
VMP1-214ENST00000592106 FSTL1Q12841 308 aa13.42□□□□□ -0.26
VMP1-214ENST00000592106 SOGA3Q5TF21 947 aa13.42□□□□□ -0.26
VMP1-214ENST00000592106 CNKSR1Q969H4 720 aa13.42□□□□□ -0.26
VMP1-214ENST00000592106 USP16Q9Y5T5 823 aa13.42□□□□□ -0.26
VMP1-214ENST00000592106 ANKRD31Q8N7Z5 1873 aa13.42□□□□□ -0.26
VMP1-214ENST00000592106 TIAM2Q8IVF5 1701 aa13.42□□□□□ -0.26
VMP1-214ENST00000592106 DCTN1Q14203 1278 aa13.41□□□□□ -0.26
VMP1-214ENST00000592106 NBPF5PQ86XG9 351 aaPredicted RBP13.41□□□□□ -0.26
VMP1-214ENST00000592106 FBXO3Q9UK99 471 aa13.41□□□□□ -0.26
VMP1-214ENST00000592106 COL11A2P13942 1736 aaPredicted RBP13.41□□□□□ -0.26
VMP1-214ENST00000592106 STYK1Q6J9G0 422 aa13.4□□□□□ -0.26
VMP1-214ENST00000592106 CLEC11AQ9Y240 323 aa13.4□□□□□ -0.26
VMP1-214ENST00000592106 PITPNM1O00562 1244 aa13.39□□□□□ -0.27
VMP1-214ENST00000592106 PIP4K2AP48426 406 aaPredicted RBP13.39□□□□□ -0.27
VMP1-214ENST00000592106 NFE2L2Q16236 605 aa13.39□□□□□ -0.27
VMP1-214ENST00000592106 MASTLQ96GX5 879 aa13.39□□□□□ -0.27
VMP1-214ENST00000592106 RRAGCQ9HB90 399 aa13.39□□□□□ -0.27
VMP1-214ENST00000592106 LTBP3Q9NS15 1303 aa13.39□□□□□ -0.27
VMP1-214ENST00000592106 ARFGEF2Q9Y6D5 1785 aa13.38□□□□□ -0.27
VMP1-214ENST00000592106 PRAMEF22A3QJZ6 481 aa13.38□□□□□ -0.27
VMP1-214ENST00000592106 GLTPD2A6NH11 291 aa13.38□□□□□ -0.27
VMP1-214ENST00000592106 NFKBIEO00221 500 aa13.38□□□□□ -0.27
VMP1-214ENST00000592106 C21orf2O43822 256 aa13.38□□□□□ -0.27
VMP1-214ENST00000592106 DPY19L2Q6NUT2 758 aa13.38□□□□□ -0.27
VMP1-214ENST00000592106 SMC1BQ8NDV3 1235 aa13.38□□□□□ -0.27
VMP1-214ENST00000592106 NIP7Q9Y221 180 aaKnown RBP eCLIP13.38□□□□□ -0.27
VMP1-214ENST00000592106 DLG5Q8TDM6 1919 aa13.38□□□□□ -0.27
VMP1-214ENST00000592106 KDM3BQ7LBC6 1761 aa13.37□□□□□ -0.27
VMP1-214ENST00000592106 WDR90Q96KV7 1748 aa13.37□□□□□ -0.27
VMP1-214ENST00000592106 SRGNP10124 158 aa13.37□□□□□ -0.27
VMP1-214ENST00000592106 VEGFAP15692 232 aaPredicted RBP13.37□□□□□ -0.27
VMP1-214ENST00000592106 RALBP1Q15311 655 aa13.37□□□□□ -0.27
VMP1-214ENST00000592106 TPTE2Q6XPS3 522 aa13.37□□□□□ -0.27
VMP1-214ENST00000592106 CCDC24Q8N4L8 307 aa13.37□□□□□ -0.27
VMP1-214ENST00000592106 TAOK3Q9H2K8 898 aa13.37□□□□□ -0.27
VMP1-214ENST00000592106 CACNA1SQ13698 1873 aa13.36□□□□□ -0.27
VMP1-214ENST00000592106 NPR1P16066 1061 aa13.36□□□□□ -0.27
VMP1-214ENST00000592106 GTF2E1P29083 439 aaPredicted RBP13.36□□□□□ -0.27
VMP1-214ENST00000592106 LMOD3Q0VAK6 560 aa13.36□□□□□ -0.27
VMP1-214ENST00000592106 ERFEQ4G0M1 354 aa13.36□□□□□ -0.27
VMP1-214ENST00000592106 PRPF40BQ6NWY9 871 aaKnown RBP13.36□□□□□ -0.27
VMP1-214ENST00000592106 KIF6Q6ZMV9 814 aa13.36□□□□□ -0.27
VMP1-214ENST00000592106 NYXQ9GZU5 481 aa13.36□□□□□ -0.27
VMP1-214ENST00000592106 FER1L6Q2WGJ9 1857 aa13.36□□□□□ -0.27
VMP1-214ENST00000592106 NBPF26B4DH59 902 aa13.35□□□□□ -0.27
VMP1-214ENST00000592106 CCDC93Q567U6 631 aa13.35□□□□□ -0.27
VMP1-214ENST00000592106 NBPF10Q6P3W6 841 aaKnown RBP13.35□□□□□ -0.27
VMP1-214ENST00000592106 CHRDL2Q6WN34 429 aa13.35□□□□□ -0.27
VMP1-214ENST00000592106 NBPF15Q8N660 670 aa13.35□□□□□ -0.27
VMP1-214ENST00000592106 PLEKHF1Q96S99 279 aa13.35□□□□□ -0.27
VMP1-214ENST00000592106 CCDC88AQ3V6T2 1871 aa13.35□□□□□ -0.27
VMP1-214ENST00000592106 ERBB4Q15303 1308 aa13.35□□□□□ -0.27
VMP1-214ENST00000592106 MIS18AQ9NYP9 233 aa13.34□□□□□ -0.27
VMP1-214ENST00000592106 DICER1Q9UPY3 1922 aaKnown RBP13.34□□□□□ -0.27
VMP1-214ENST00000592106 FAM177BA6PVY3 158 aa13.33□□□□□ -0.28
VMP1-214ENST00000592106 ERVV-1B6SEH8 477 aa13.33□□□□□ -0.28
VMP1-214ENST00000592106 PRELPP51888 382 aa13.33□□□□□ -0.28
VMP1-214ENST00000592106 EIF4A1P60842 406 aaKnown RBP13.33□□□□□ -0.28
VMP1-214ENST00000592106 TSPYL4Q9UJ04 414 aa13.33□□□□□ -0.28
VMP1-214ENST00000592106 MAP3K15Q6ZN16 1313 aa13.33□□□□□ -0.28
VMP1-214ENST00000592106 IBTKQ9P2D0 1353 aaPredicted RBP13.32□□□□□ -0.28
VMP1-214ENST00000592106 SLX4Q8IY92 1834 aa13.32□□□□□ -0.28
VMP1-214ENST00000592106 PRR29P0C7W0 189 aa13.32□□□□□ -0.28
VMP1-214ENST00000592106 ALDH1B1P30837 517 aa13.32□□□□□ -0.28
VMP1-214ENST00000592106 NGEFQ8N5V2 710 aa13.32□□□□□ -0.28
VMP1-214ENST00000592106 RRP7AQ9Y3A4 280 aaKnown RBP13.32□□□□□ -0.28
VMP1-214ENST00000592106 MYBBP1AQ9BQG0 1328 aaKnown RBP13.32□□□□□ -0.28
VMP1-214ENST00000592106 MYL6BP14649 208 aa13.31□□□□□ -0.28
VMP1-214ENST00000592106 HLFQ16534 295 aa13.31□□□□□ -0.28
VMP1-214ENST00000592106 RTKN2Q8IZC4 609 aa13.31□□□□□ -0.28
VMP1-214ENST00000592106 BABAM1Q9NWV8 329 aa13.31□□□□□ -0.28
VMP1-214ENST00000592106 RIC1Q4ADV7 1423 aa13.3□□□□□ -0.28
VMP1-214ENST00000592106 KLRG2A4D1S0 409 aaPredicted RBP13.3□□□□□ -0.28
VMP1-214ENST00000592106 IQCA1LA6NCM1 817 aa13.3□□□□□ -0.28
VMP1-214ENST00000592106 RIPK4P57078 832 aa13.3□□□□□ -0.28
VMP1-214ENST00000592106 FKBP4Q02790 459 aaKnown RBP eCLIP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 148.8 ms