RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 PLCG2P16885 1265 aa13.99□□□□□ -0.17
VPS4B-207ENST00000591519 ARHGAP27Q6ZUM4 889 aa13.99□□□□□ -0.17
VPS4B-207ENST00000591519 KIF3CO14782 793 aa13.98□□□□□ -0.17
VPS4B-207ENST00000591519 U2SURPO15042 1029 aaKnown RBP13.98□□□□□ -0.17
VPS4B-207ENST00000591519 STARD3NLO95772 234 aa13.98□□□□□ -0.17
VPS4B-207ENST00000591519 ZNF526Q8TF50 670 aaPredicted RBP13.98□□□□□ -0.17
VPS4B-207ENST00000591519 TEX13AQ9BXU3 409 aaPredicted RBP13.98□□□□□ -0.17
VPS4B-207ENST00000591519 ZBTB1Q9Y2K1 713 aa13.98□□□□□ -0.17
VPS4B-207ENST00000591519 UBR2Q8IWV8 1755 aa13.97□□□□□ -0.17
VPS4B-207ENST00000591519 EIF5P55010 431 aaKnown RBP13.97□□□□□ -0.17
VPS4B-207ENST00000591519 IRX5P78411 483 aaPredicted RBP13.97□□□□□ -0.17
VPS4B-207ENST00000591519 NFIXQ14938 502 aa13.97□□□□□ -0.17
VPS4B-207ENST00000591519 ZNF790Q6PG37 636 aa13.97□□□□□ -0.17
VPS4B-207ENST00000591519 BCL2L12Q9HB09 334 aa13.97□□□□□ -0.17
VPS4B-207ENST00000591519 COL15A1P39059 1388 aa13.96□□□□□ -0.17
VPS4B-207ENST00000591519 CEMIPQ8WUJ3 1361 aa13.96□□□□□ -0.17
VPS4B-207ENST00000591519 TEFQ10587 303 aa13.96□□□□□ -0.17
VPS4B-207ENST00000591519 DALRD3Q5D0E6 543 aaKnown RBP13.96□□□□□ -0.17
VPS4B-207ENST00000591519 TTC5Q8N0Z6 440 aa13.96□□□□□ -0.17
VPS4B-207ENST00000591519 ZNF496Q96IT1 587 aaPredicted RBP13.96□□□□□ -0.17
VPS4B-207ENST00000591519 PHACTR3Q96KR7 559 aa13.96□□□□□ -0.17
VPS4B-207ENST00000591519 CFAP53Q96M91 514 aa13.96□□□□□ -0.17
VPS4B-207ENST00000591519 ARFGEF1Q9Y6D6 1849 aa13.96□□□□□ -0.17
VPS4B-207ENST00000591519 A0A087WZG4 1122 aa13.95□□□□□ -0.18
VPS4B-207ENST00000591519 RSPH6AQ9H0K4 717 aa13.95□□□□□ -0.18
VPS4B-207ENST00000591519 HEG1Q9ULI3 1381 aa13.95□□□□□ -0.18
VPS4B-207ENST00000591519 SERPINB2P05120 415 aa13.94□□□□□ -0.18
VPS4B-207ENST00000591519 HSPA6P17066 643 aa13.94□□□□□ -0.18
VPS4B-207ENST00000591519 CANXP27824 592 aaKnown RBP13.94□□□□□ -0.18
VPS4B-207ENST00000591519 CHRNA5P30532 468 aa13.94□□□□□ -0.18
VPS4B-207ENST00000591519 CNGB1Q14028 1251 aaPredicted RBP13.94□□□□□ -0.18
VPS4B-207ENST00000591519 NUDCQ9Y266 331 aa13.94□□□□□ -0.18
VPS4B-207ENST00000591519 NRXN2Q9P2S2 1712 aa13.93□□□□□ -0.18
VPS4B-207ENST00000591519 PPP2R1AP30153 589 aa13.93□□□□□ -0.18
VPS4B-207ENST00000591519 PRKAR2BP31323 418 aa13.93□□□□□ -0.18
VPS4B-207ENST00000591519 SIPA1L3O60292 1781 aaPredicted RBP13.93□□□□□ -0.18
VPS4B-207ENST00000591519 TOMM70O94826 608 aa13.92□□□□□ -0.18
VPS4B-207ENST00000591519 IL6STP40189 918 aaPredicted RBP13.92□□□□□ -0.18
VPS4B-207ENST00000591519 GSE1Q14687 1217 aa13.92□□□□□ -0.18
VPS4B-207ENST00000591519 C9orf131Q5VYM1 1079 aa13.92□□□□□ -0.18
VPS4B-207ENST00000591519 SLAIN1Q8ND83 568 aa13.92□□□□□ -0.18
VPS4B-207ENST00000591519 FMNL2Q96PY5 1086 aa13.92□□□□□ -0.18
VPS4B-207ENST00000591519 AFDNP55196 1824 aaKnown RBP13.92□□□□□ -0.18
VPS4B-207ENST00000591519 BTBD11A6QL63 1104 aa13.9□□□□□ -0.18
VPS4B-207ENST00000591519 KCNQ3O43525 872 aa13.9□□□□□ -0.18
VPS4B-207ENST00000591519 HTATSF1O43719 755 aaKnown RBP13.9□□□□□ -0.18
VPS4B-207ENST00000591519 A1BGP04217 495 aa13.9□□□□□ -0.18
VPS4B-207ENST00000591519 U2AF1L5P0DN76 240 aaPredicted RBP13.9□□□□□ -0.18
VPS4B-207ENST00000591519 U2AF1Q01081 240 aaKnown RBP eCLIP13.9□□□□□ -0.18
VPS4B-207ENST00000591519 PDZRN3Q9UPQ7 1066 aa13.9□□□□□ -0.18
VPS4B-207ENST00000591519 CEP350Q5VT06 3117 aa13.9□□□□□ -0.18
VPS4B-207ENST00000591519 TBC1D9BQ66K14 1250 aa13.89□□□□□ -0.19
VPS4B-207ENST00000591519 TTLL6Q8N841 843 aa13.89□□□□□ -0.19
VPS4B-207ENST00000591519 NMRK2Q9NPI5 230 aa13.89□□□□□ -0.19
VPS4B-207ENST00000591519 USP16Q9Y5T5 823 aa13.89□□□□□ -0.19
VPS4B-207ENST00000591519 SBF1O95248 1867 aa13.89□□□□□ -0.19
VPS4B-207ENST00000591519 H0YIN7 160 aa13.88□□□□□ -0.19
VPS4B-207ENST00000591519 BRIP1Q9BX63 1249 aa13.88□□□□□ -0.19
VPS4B-207ENST00000591519 TBC1D2BQ9UPU7 963 aa13.88□□□□□ -0.19
VPS4B-207ENST00000591519 CAMTA2O94983 1202 aa13.87□□□□□ -0.19
VPS4B-207ENST00000591519 C2CD5Q86YS7 1000 aa13.87□□□□□ -0.19
VPS4B-207ENST00000591519 RTF1Q92541 710 aaKnown RBP13.87□□□□□ -0.19
VPS4B-207ENST00000591519 OCEL1Q9H607 264 aa13.87□□□□□ -0.19
VPS4B-207ENST00000591519 RNF181Q9P0P0 153 aa13.87□□□□□ -0.19
VPS4B-207ENST00000591519 KDM2BQ8NHM5 1336 aa13.87□□□□□ -0.19
VPS4B-207ENST00000591519 ZC3H4Q9UPT8 1303 aaKnown RBP13.87□□□□□ -0.19
VPS4B-207ENST00000591519 DLEC1Q9Y238 1755 aa13.86□□□□□ -0.19
VPS4B-207ENST00000591519 SNRPA1P09661 255 aaKnown RBP13.86□□□□□ -0.19
VPS4B-207ENST00000591519 PDE6BP35913 854 aa13.86□□□□□ -0.19
VPS4B-207ENST00000591519 CLEC4GQ6UXB4 293 aa13.86□□□□□ -0.19
VPS4B-207ENST00000591519 BICDL1Q6ZP65 573 aa13.86□□□□□ -0.19
VPS4B-207ENST00000591519 MCM10Q7L590 875 aa13.86□□□□□ -0.19
VPS4B-207ENST00000591519 NPM2Q86SE8 214 aaKnown RBP13.86□□□□□ -0.19
VPS4B-207ENST00000591519 RBM46Q8TBY0 533 aaKnown RBP13.86□□□□□ -0.19
VPS4B-207ENST00000591519 CARMIL3Q8ND23 1372 aa13.85□□□□□ -0.19
VPS4B-207ENST00000591519 RGL2O15211 777 aa13.85□□□□□ -0.19
VPS4B-207ENST00000591519 LMNB1P20700 586 aa13.85□□□□□ -0.19
VPS4B-207ENST00000591519 APLP1P51693 650 aa13.85□□□□□ -0.19
VPS4B-207ENST00000591519 PRR5LQ6MZQ0 368 aa13.85□□□□□ -0.19
VPS4B-207ENST00000591519 ZNF467Q7Z7K2 595 aaPredicted RBP13.85□□□□□ -0.19
VPS4B-207ENST00000591519 IFNLR1Q8IU57 520 aaPredicted RBP13.85□□□□□ -0.19
VPS4B-207ENST00000591519 SETDB2Q96T68 719 aa13.85□□□□□ -0.19
VPS4B-207ENST00000591519 PRELPP51888 382 aa13.84□□□□□ -0.19
VPS4B-207ENST00000591519 TAF7Q15545 349 aaPredicted RBP13.84□□□□□ -0.19
VPS4B-207ENST00000591519 DZIP3Q86Y13 1208 aaKnown RBP13.84□□□□□ -0.19
VPS4B-207ENST00000591519 SCN7AQ01118 1682 aa13.83□□□□□ -0.2
VPS4B-207ENST00000591519 PRAMEF22A3QJZ6 481 aa13.83□□□□□ -0.2
VPS4B-207ENST00000591519 FSTL1Q12841 308 aa13.83□□□□□ -0.2
VPS4B-207ENST00000591519 DCTN1Q14203 1278 aa13.83□□□□□ -0.2
VPS4B-207ENST00000591519 DNAJC5GQ8N7S2 189 aa13.83□□□□□ -0.2
VPS4B-207ENST00000591519 ZNF330Q9Y3S2 320 aaPredicted RBP13.83□□□□□ -0.2
VPS4B-207ENST00000591519 ANKRD31Q8N7Z5 1873 aa13.82□□□□□ -0.2
VPS4B-207ENST00000591519 GLTPD2A6NH11 291 aa13.82□□□□□ -0.2
VPS4B-207ENST00000591519 NBPF26B4DH59 902 aa13.82□□□□□ -0.2
VPS4B-207ENST00000591519 NFKBIEO00221 500 aa13.82□□□□□ -0.2
VPS4B-207ENST00000591519 RASSF7Q02833 373 aa13.82□□□□□ -0.2
VPS4B-207ENST00000591519 NBPF10Q6P3W6 841 aaKnown RBP13.82□□□□□ -0.2
VPS4B-207ENST00000591519 NBPF15Q8N660 670 aa13.82□□□□□ -0.2
VPS4B-207ENST00000591519 ZNF622Q969S3 477 aaKnown RBP eCLIP13.82□□□□□ -0.2
VPS4B-207ENST00000591519 PLEKHF1Q96S99 279 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms