RNA–Protein interactions for RNA: ENST00000590901.5

CXXC1-214, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 2,562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-214ENST00000590901 CARD10Q9BWT7 1032 aa18.92■□□□□ 0.62
CXXC1-214ENST00000590901 LTBP4Q8N2S1 1624 aa18.92■□□□□ 0.62
CXXC1-214ENST00000590901 ADAMTS2O95450 1211 aa18.92■□□□□ 0.62
CXXC1-214ENST00000590901 PIP4K2BP78356 416 aa18.92■□□□□ 0.62
CXXC1-214ENST00000590901 MCTP1Q6DN14 999 aa18.92■□□□□ 0.62
CXXC1-214ENST00000590901 JARID2Q92833 1246 aaPredicted RBP18.92■□□□□ 0.62
CXXC1-214ENST00000590901 IL2RBP14784 551 aa18.91■□□□□ 0.62
CXXC1-214ENST00000590901 SRCIN1Q9C0H9 1055 aa18.91■□□□□ 0.62
CXXC1-214ENST00000590901 SOS1Q07889 1333 aaPredicted RBP18.91■□□□□ 0.62
CXXC1-214ENST00000590901 UQCRHLA0A096LP55 91 aa18.91■□□□□ 0.62
CXXC1-214ENST00000590901 UQCRHP07919 91 aa18.91■□□□□ 0.62
CXXC1-214ENST00000590901 NCLP19338 710 aaKnown RBP18.91■□□□□ 0.62
CXXC1-214ENST00000590901 NUCB2P80303 420 aa18.91■□□□□ 0.62
CXXC1-214ENST00000590901 PTCD1O75127 700 aaKnown RBP18.9■□□□□ 0.62
CXXC1-214ENST00000590901 RBSNQ9H1K0 784 aa18.9■□□□□ 0.62
CXXC1-214ENST00000590901 LRP10Q7Z4F1 713 aa18.9■□□□□ 0.62
CXXC1-214ENST00000590901 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.9■□□□□ 0.62
CXXC1-214ENST00000590901 UBTFL1P0CB47 393 aaPredicted RBP18.89■□□□□ 0.62
CXXC1-214ENST00000590901 CSPP1Q1MSJ5 1256 aa18.89■□□□□ 0.62
CXXC1-214ENST00000590901 MTERF4Q7Z6M4 381 aaKnown RBP18.89■□□□□ 0.62
CXXC1-214ENST00000590901 LMBRD1Q9NUN5 540 aa18.89■□□□□ 0.62
CXXC1-214ENST00000590901 SHANK3Q9BYB0 1731 aa18.89■□□□□ 0.61
CXXC1-214ENST00000590901 ATP8B2P98198 1209 aa18.88■□□□□ 0.61
CXXC1-214ENST00000590901 COPS6Q7L5N1 327 aa18.88■□□□□ 0.61
CXXC1-214ENST00000590901 XAGE3Q8WTP9 111 aa18.88■□□□□ 0.61
CXXC1-214ENST00000590901 DDX21Q9NR30 783 aaKnown RBP eCLIP18.88■□□□□ 0.61
CXXC1-214ENST00000590901 ZKSCAN5Q9Y2L8 839 aa18.88■□□□□ 0.61
CXXC1-214ENST00000590901 ABCC6O95255 1503 aa18.88■□□□□ 0.61
CXXC1-214ENST00000590901 CDC45O75419 566 aa18.88■□□□□ 0.61
CXXC1-214ENST00000590901 RABEP1Q15276 862 aa18.88■□□□□ 0.61
CXXC1-214ENST00000590901 PPP1R42Q7Z4L9 355 aa18.88■□□□□ 0.61
CXXC1-214ENST00000590901 DYNC1I1O14576 645 aa18.88■□□□□ 0.61
CXXC1-214ENST00000590901 GNAI3P08754 354 aa18.88■□□□□ 0.61
CXXC1-214ENST00000590901 MCM5P33992 734 aa18.88■□□□□ 0.61
CXXC1-214ENST00000590901 CYP2E1P05181 493 aaPredicted RBP18.87■□□□□ 0.61
CXXC1-214ENST00000590901 IGKV5-2P06315 115 aa18.87■□□□□ 0.61
CXXC1-214ENST00000590901 KSR2Q6VAB6 950 aa18.87■□□□□ 0.61
CXXC1-214ENST00000590901 GLI3P10071 1580 aa18.87■□□□□ 0.61
CXXC1-214ENST00000590901 TTC5Q8N0Z6 440 aa18.87■□□□□ 0.61
CXXC1-214ENST00000590901 NBPF26B4DH59 902 aa18.86■□□□□ 0.61
CXXC1-214ENST00000590901 NBPF14Q5TI25 921 aa18.86■□□□□ 0.61
CXXC1-214ENST00000590901 NBPF10Q6P3W6 841 aaKnown RBP18.86■□□□□ 0.61
CXXC1-214ENST00000590901 NBPF15Q8N660 670 aa18.86■□□□□ 0.61
CXXC1-214ENST00000590901 KAZALD1Q96I82 304 aa18.86■□□□□ 0.61
CXXC1-214ENST00000590901 IL1RAPL2Q9NP60 686 aa18.86■□□□□ 0.61
CXXC1-214ENST00000590901 PCDH11XQ9BZA7 1347 aa18.86■□□□□ 0.61
CXXC1-214ENST00000590901 PCDH11YQ9BZA8 1340 aa18.86■□□□□ 0.61
CXXC1-214ENST00000590901 NUTM2BA6NNL0 878 aaPredicted RBP18.86■□□□□ 0.61
CXXC1-214ENST00000590901 NUTM2EB1AL46 878 aaPredicted RBP18.86■□□□□ 0.61
CXXC1-214ENST00000590901 PRIM1P49642 420 aaKnown RBP18.86■□□□□ 0.61
CXXC1-214ENST00000590901 NUTM2AQ8IVF1 878 aaPredicted RBP18.86■□□□□ 0.61
CXXC1-214ENST00000590901 MRC1P22897 1456 aa18.85■□□□□ 0.61
CXXC1-214ENST00000590901 A1BGP04217 495 aa18.85■□□□□ 0.61
CXXC1-214ENST00000590901 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.85■□□□□ 0.61
CXXC1-214ENST00000590901 SNRPA1P09661 255 aaKnown RBP18.85■□□□□ 0.61
CXXC1-214ENST00000590901 SMAP1Q8IYB5 467 aaPredicted RBP18.85■□□□□ 0.61
CXXC1-214ENST00000590901 N4BP2Q86UW6 1770 aaPredicted RBP18.84■□□□□ 0.61
CXXC1-214ENST00000590901 COL16A1Q07092 1604 aaPredicted RBP18.84■□□□□ 0.61
CXXC1-214ENST00000590901 FMNL2Q96PY5 1086 aa18.84■□□□□ 0.61
CXXC1-214ENST00000590901 HYPKQ9NX55 129 aa18.84■□□□□ 0.61
CXXC1-214ENST00000590901 ASAP1Q9ULH1 1129 aa18.84■□□□□ 0.61
CXXC1-214ENST00000590901 SRGAP3O43295 1099 aa18.83■□□□□ 0.6
CXXC1-214ENST00000590901 SASS6Q6UVJ0 657 aa18.83■□□□□ 0.6
CXXC1-214ENST00000590901 CCDC39Q9UFE4 941 aa18.83■□□□□ 0.6
CXXC1-214ENST00000590901 PA2G4Q9UQ80 394 aaKnown RBP18.83■□□□□ 0.6
CXXC1-214ENST00000590901 PXDNLA1KZ92 1463 aa18.83■□□□□ 0.6
CXXC1-214ENST00000590901 PARP4Q9UKK3 1724 aaKnown RBP18.83■□□□□ 0.6
CXXC1-214ENST00000590901 TOGARAM1Q9Y4F4 1720 aa18.83■□□□□ 0.6
CXXC1-214ENST00000590901 ATP5J2-PTCD1G3V325 749 aa18.82■□□□□ 0.6
CXXC1-214ENST00000590901 NKX1-1Q15270 411 aaPredicted RBP18.82■□□□□ 0.6
CXXC1-214ENST00000590901 TTC22Q5TAA0 569 aa18.82■□□□□ 0.6
CXXC1-214ENST00000590901 CWC22Q9HCG8 908 aaKnown RBP18.82■□□□□ 0.6
CXXC1-214ENST00000590901 RIC3Q7Z5B4 369 aa18.82■□□□□ 0.6
CXXC1-214ENST00000590901 SSH3Q8TE77 659 aa18.82■□□□□ 0.6
CXXC1-214ENST00000590901 HMMRO75330 724 aa18.81■□□□□ 0.6
CXXC1-214ENST00000590901 SDSP20132 328 aa18.81■□□□□ 0.6
CXXC1-214ENST00000590901 EPHA10Q5JZY3 1008 aa18.81■□□□□ 0.6
CXXC1-214ENST00000590901 TTLL7Q6ZT98 887 aa18.81■□□□□ 0.6
CXXC1-214ENST00000590901 SUCLG2Q96I99 432 aa18.81■□□□□ 0.6
CXXC1-214ENST00000590901 MYD88Q99836 296 aa18.81■□□□□ 0.6
CXXC1-214ENST00000590901 RBM27Q9P2N5 1060 aaKnown RBP18.81■□□□□ 0.6
CXXC1-214ENST00000590901 PRPF40AO75400 957 aaKnown RBP18.81■□□□□ 0.6
CXXC1-214ENST00000590901 SURF6O75683 361 aaKnown RBP18.81■□□□□ 0.6
CXXC1-214ENST00000590901 LRSAM1Q6UWE0 723 aa18.81■□□□□ 0.6
CXXC1-214ENST00000590901 KLHDC4Q8TBB5 520 aa18.81■□□□□ 0.6
CXXC1-214ENST00000590901 GPT2Q8TD30 523 aa18.81■□□□□ 0.6
CXXC1-214ENST00000590901 PIGBQ92521 554 aa18.81■□□□□ 0.6
CXXC1-214ENST00000590901 NUTM1Q86Y26 1132 aa18.8■□□□□ 0.6
CXXC1-214ENST00000590901 C9orf78Q9NZ63 289 aaPredicted RBP18.8■□□□□ 0.6
CXXC1-214ENST00000590901 EP400Q96L91 3159 aa18.8■□□□□ 0.6
CXXC1-214ENST00000590901 PKP1Q13835 747 aa18.8■□□□□ 0.6
CXXC1-214ENST00000590901 POLA2Q14181 598 aa18.8■□□□□ 0.6
CXXC1-214ENST00000590901 SALL3Q9BXA9 1300 aa18.79■□□□□ 0.6
CXXC1-214ENST00000590901 PDE1AP54750 535 aa18.79■□□□□ 0.6
CXXC1-214ENST00000590901 ERVV-2B6SEH9 535 aa18.78■□□□□ 0.6
CXXC1-214ENST00000590901 ANKRD13DQ6ZTN6 518 aa18.78■□□□□ 0.6
CXXC1-214ENST00000590901 UNC5CLQ8IV45 518 aa18.78■□□□□ 0.6
CXXC1-214ENST00000590901 LRRCC1Q9C099 1032 aa18.78■□□□□ 0.6
CXXC1-214ENST00000590901 KCPQ6ZWJ8 1503 aa18.78■□□□□ 0.6
CXXC1-214ENST00000590901 AHDC1Q5TGY3 1603 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms